Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMOD3

Gene Name Gene ID Reads Annotation
LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]










Genes with expression patterns similar to LMOD3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
2. BX511021.1 ENSDARG00000073936 647 2.617 - 0.810 - - - 0.844 - 0.963 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
3. smyd1b ENSDARG00000091253 4964 2.372 0.873 0.795 - - - - - 0.704 - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
4. ptrfa ptrfa 4363 2.357 0.821 0.816 - - - 0.720 - - -
5. CR392006.1 CR392006.1 1401 2.349 0.878 0.767 - - - 0.704 - - -
6. PAQR4 PAQR4 2150 2.261 0.784 0.740 - - - 0.737 - - -
7. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.234 0.777 0.751 - - - 0.706 - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
8. slc25a26 ENSDARG00000058208, ENSDARG00000110562, ENSDARG00000111558 584 2.196 - 0.730 - - - 0.721 - 0.745 - solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:ZFIN;Acc:ZDB-GENE-050913-126]
9. anxa13 ENSDARG00000013976 2476 2.182 0.715 - - - - - 0.756 0.711 - annexin A13 [Source:ZFIN;Acc:ZDB-GENE-010406-1]
10. smtnl1 ENSDARG00000041257 7410 1.764 0.856 - - - - - - 0.908 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
11. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.747 0.893 0.854 - - - - - - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
12. sptb ENSDARG00000030490 7128 1.736 0.895 0.841 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
13. NRAP ENSDARG00000009341 3565 1.736 0.864 0.872 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
14. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.732 0.816 - - - - - - 0.916 - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
15. hapln1a ENSDARG00000089769 12334 1.726 0.871 0.855 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
16. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.716 0.792 0.924 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
17. C13H10orf71 3489 1.712 0.901 0.811 - - - - - - - chromosome 13 C10orf71 homolog
18. CABZ01080590.2 CABZ01080590.2 2038 1.693 0.842 - - - - - - 0.851 -
19. usp28 ENSDARG00000008880 1850 1.69 0.840 0.850 - - - - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
20. tnnt2d ENSDARG00000002988 7590 1.69 0.830 0.860 - - - - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
21. ndufaf4 ENSDARG00000077859 552 1.688 - 0.775 - - - - - 0.913 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
22. nrxn2b ENSDARG00000063150 343 1.688 - - - - - - 0.732 0.956 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
23. reep1 ENSDARG00000014854 915 1.68 - 0.726 - - - - - 0.954 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
24. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.675 0.790 0.885 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
25. MUSTN1 MUSTN1 1882 1.675 0.859 0.816 - - - - - - -
26. dtnba ENSDARG00000077694 5483 1.674 0.810 0.864 - - - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
27. znf648 ENSDARG00000104823 1918 1.673 0.811 0.862 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
28. prx ENSDARG00000017246 6183 1.673 0.828 0.845 - - - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
29. PTPLA PTPLA 4044 1.67 0.815 0.855 - - - - - - -
30. tgm1l1 ENSDARG00000102106 1437 1.669 0.804 0.865 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
31. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.666 - 0.714 - - - - - 0.952 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
32. adam9 ENSDARG00000010070 192 1.665 0.767 - - - - - - 0.898 - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
33. CABZ01080599.2 CABZ01080599.2 192 1.662 - 0.730 - - - - - 0.932 -
34. plecb ENSDARG00000021987 13621 1.659 0.882 0.777 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
35. pygma ENSDARG00000055518 15972 1.658 0.807 0.851 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
36. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.657 0.798 0.859 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
37. lamb2 ENSDARG00000002084 3265 1.656 0.842 0.814 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
38. sh3bgr ENSDARG00000021633 3498 1.656 0.842 0.814 - - - - - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
39. col9a3 ENSDARG00000037845 6564 1.65 0.772 0.878 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
40. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.646 0.732 0.914 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
41. smyd2b ENSDARG00000005629 8181 1.644 0.805 0.839 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
42. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.641 0.792 0.849 - - - - - - -
43. CR450814.3 CR450814.3 608 1.64 0.823 0.817 - - - - - - -
44. arpp21 ENSDARG00000061081 892 1.639 0.874 0.765 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
45. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.638 0.771 0.867 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
46. akap6 ENSDARG00000077295 1382 1.635 0.794 0.841 - - - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
47. xrcc6bp1 662 1.633 - - - - - - 0.718 0.915 - XRCC6 binding protein 1
48. ptpdc1 ptpdc1 281 1.633 - - - - - - 0.728 0.905 -
49. ptrfb ptrfb 567 1.629 0.755 0.874 - - - - - - -
50. dtna ENSDARG00000031015 1746 1.626 0.850 0.776 - - - - - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
51. hfe2 4113 1.622 0.835 0.787 - - - - - - - hemochromatosis type 2
52. mybpc2b ENSDARG00000021265 9618 1.619 0.736 0.883 - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
53. artnb ENSDARG00000093714 107 1.617 0.757 0.860 - - - - - - - artemin b [Source:ZFIN;Acc:ZDB-GENE-070705-129]
54. plod2 ENSDARG00000011821 1656 1.617 0.804 0.813 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
55. epyc ENSDARG00000056950 7783 1.617 0.746 0.871 - - - - - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
56. C1QBP ENSDARG00000039887 11186 1.616 0.799 - - - - - - 0.817 - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
57. enah ENSDARG00000032049 1526 1.615 - 0.830 - - - - - 0.785 - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
58. actn3b ENSDARG00000001431 15747 1.615 0.795 0.820 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
59. ntla ntla 926 1.611 0.716 0.895 - - - - - - -
60. TMPO TMPO 3264 1.606 0.793 0.813 - - - - - - -
61. BX294434.1 ENSDARG00000061272 6493 1.605 0.786 0.819 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
62. txlnbb ENSDARG00000076241 6396 1.605 0.786 0.819 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
63. ntmt1 ENSDARG00000022399 5779 1.603 0.745 0.858 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
64. myhc4 ENSDARG00000035438 1322 1.602 0.749 0.853 - - - - - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
65. CU571169.1 ENSDARG00000100253 575 1.6 0.802 - - - - - - 0.798 -
66. myod1 ENSDARG00000030110 6019 1.599 0.781 0.818 - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
67. srl ENSDARG00000104587 11126 1.598 0.777 0.821 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
68. stac3 ENSDARG00000098883 1765 1.595 0.794 0.801 - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
69. loxl3b ENSDARG00000039563 1657 1.592 0.862 0.730 - - - - - - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
70. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.592 0.773 0.819 - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
71. vwde ENSDARG00000103443 5758 1.592 0.739 - - - - 0.853 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
72. eef2l2 ENSDARG00000035256 6815 1.59 0.757 0.833 - - - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
73. sfxn4 ENSDARG00000069832, ENSDARG00000115771 696 1.587 0.802 - - - - - 0.785 - - sideroflexin 4 [Source:ZFIN;Acc:ZDB-GENE-050309-187]
74. ryr3 ENSDARG00000071331 6795 1.585 0.715 0.870 - - - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
75. CR388002.1 CR388002.1 1998 1.584 0.759 0.825 - - - - - - -
76. myoz2b ENSDARG00000037266 2139 1.583 0.804 0.779 - - - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
77. pbxip1a ENSDARG00000071015 4960 1.58 0.765 0.815 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
78. BX530018.3 ENSDARG00000107022 614 1.58 0.725 0.855 - - - - - - -
79. mthfr ENSDARG00000053087 373 1.577 0.792 0.785 - - - - - - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
80. gpn3 ENSDARG00000069525 499 1.575 0.748 0.827 - - - - - - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
81. casq1b ENSDARG00000018105 2643 1.573 0.816 0.757 - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
82. golt1ba ENSDARG00000022795 121 1.572 - 0.813 - - - - 0.759 - - golgi transport 1Ba [Source:ZFIN;Acc:ZDB-GENE-041210-157]
83. vcl vcl 6667 1.571 0.773 0.798 - - - - - - -
84. xirp2a ENSDARG00000071113 7113 1.57 0.833 0.737 - - - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
85. trdn ENSDARG00000041779 4283 1.569 0.819 0.750 - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
86. hhatla ENSDARG00000039051 6598 1.569 0.746 0.823 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
87. nkx3.2 ENSDARG00000037639 575 1.567 0.796 - - - - 0.771 - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
88. fam172a ENSDARG00000052697 422 1.567 0.737 - - - - - - 0.830 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
89. irx3b ENSDARG00000031138 2538 1.564 - 0.809 - - - - - 0.755 - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
90. ppp1r14c ENSDARG00000077341 1587 1.562 0.800 0.762 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
91. MYOM3 2720 1.56 0.841 - 0.719 - - - - - - myomesin 3, transcript variant X2
92. CABZ01044297.1 CABZ01044297.1 2015 1.56 0.742 0.818 - - - - - - -
93. eng1a eng1a 484 1.556 - 0.781 - - - 0.775 - - -
94. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.553 0.779 0.774 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
95. cacnb1 ENSDARG00000002167 1402 1.552 0.766 0.786 - - - - - - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
96. CU302436.1 ENSDARG00000114500 1619 1.552 0.705 0.847 - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
97. foxc1b ENSDARG00000055398 1499 1.548 - 0.805 - - - 0.743 - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
98. rnf41l ENSDARG00000073918 329 1.547 - 0.762 - - - - 0.785 - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
99. ryr1a ENSDARG00000011422 2377 1.545 - 0.822 - - 0.723 - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
100. cacng1 cacng1 3118 1.545 0.799 0.746 - - - - - - -

There are 1389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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