Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMOD1

Gene Name Gene ID Reads Annotation
LMOD1 ENSGALG00000028721 81 leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]











Genes with expression patterns similar to LMOD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMOD1 ENSGALG00000028721 81 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
2. RIPK4 ENSGALG00000040189 102 1.655 - - - - - 0.776 - 0.879 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
3. CCR8 ENSGALG00000038069 6 1.59 - - - - - - 0.845 - - 0.745 C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
4. TP53I3 ENSGALG00000016502 178 1.549 - - - - - 0.737 - 0.812 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
5. ELN 765 1.464 - - - 0.742 - - - 0.722 - - elastin, transcript variant X24
6. VCAM1 ENSGALG00000005257 102 1 - - - - - 1.000 - - - - vascular cell adhesion molecule 1, transcript variant X1
7. IL23R IL23R 25 1 - - - - - 1.000 - - - -
8. ALDH8A1 ENSGALG00000013969 8 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
9. ACER2 ENSGALG00000015081 18 1 - - - - - 1.000 - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
10. ENSGALG00000026267 ENSGALG00000026267 1 1 - - - - - 1.000 - - - -
11. PRKD3 ENSGALG00000010612 2 1 - - - - - 1.000 - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
12. APELA ENSGALG00000023444 3 1 - - - - - 1.000 - - - - apelin receptor early endogenous ligand [Source:NCBI gene;Acc:770154]
13. KCNH7 ENSGALG00000038543 20 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 7 [Source:HGNC Symbol;Acc:HGNC:18863]
14. LPHN3 LPHN3 41 1 - - - - - 1.000 - - - -
15. EHF ENSGALG00000007817 11 1 - - - - - 1.000 - - - - ETS homologous factor [Source:NCBI gene;Acc:425791]
16. GPR183 ENSGALG00000016881 5 1 - - - - - 1.000 - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
17. EFCAB11 ENSGALG00000020402 16 1 - - - - - 1.000 - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
18. ENSGALG00000026922 ENSGALG00000026922 3 1 - - - - - 1.000 - - - -
19. ODF2L ENSGALG00000006804 10 1 - - - - - 1.000 - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
20. TMEM204 ENSGALG00000029047 8 1 - - - - - 1.000 - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
21. SK2 SK2 74 1 - - - - - 1.000 - - - -
22. VEPH1 ENSGALG00000009682 51 1 - - - - - 1.000 - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
23. SLC6A9 ENSGALG00000010098 5 1 - - - - - 1.000 - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
24. QRSL1 ENSGALG00000015338 16 1 - - - - - 1.000 - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
25. KDM1B ENSGALG00000012685 11 1 - - - - - 1.000 - - - - lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
26. HTR2A ENSGALG00000016992 73 1 - - - - - 1.000 - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
27. ENSGALG00000026135 ENSGALG00000026135 16 0.984 - - - - - 0.984 - - - -
28. STAB2 32 0.981 - - - - - 0.981 - - - - stabilin 2
29. ENSGALG00000005578 ENSGALG00000005578 16 0.979 - - - - - 0.979 - - - -
30. VEGFRKDRL ENSGALG00000007646 18 0.978 - - - - - 0.978 - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
31. ATP6AP2 ENSGALG00000016241 257 0.976 - - - - - 0.976 - - - - ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
32. FGD6 ENSGALG00000011342 34 0.972 - - - - - 0.972 - - - - FYVE, RhoGEF and PH domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21740]
33. ENSGALG00000020877 ENSGALG00000020877 36 0.966 - - - - - 0.966 - - - -
34. C12orf29 ENSGALG00000011168 26 0.963 - - - - - 0.963 - - - - chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:HGNC:25322]
35. CACNA1I ENSGALG00000035051 27 0.959 - - - - - 0.959 - - - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
36. GRIK4 ENSGALG00000006638 22 0.943 - - - - - 0.943 - - - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
37. WDR41 ENSGALG00000004350 16 0.942 - - - - - - 0.942 - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
38. APOD ENSGALG00000006995 2 0.942 - - - - - - 0.942 - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
39. ENSGALG00000005812 ENSGALG00000005812 40 0.942 - - - - - - 0.942 - - -
40. TIMP4 ENSGALG00000004969 21 0.942 - - - - - - 0.942 - - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
41. ARHGAP25 ENSGALG00000035194 74 0.94 - - - - - - - 0.940 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
42. SOGA1 ENSGALG00000003409 6 0.926 - - - - - 0.926 - - - - suppressor of glucose, autophagy associated 1 [Source:HGNC Symbol;Acc:HGNC:16111]
43. CAPN13 ENSGALG00000020084 6 0.922 - - - - - 0.922 - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
44. DZANK1 ENSGALG00000008731 120 0.916 - - - - - - - 0.916 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
45. PIP5K1A ENSGALG00000027372 137 0.915 - - - - - - - 0.915 - - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha [Source:NCBI gene;Acc:429983]
46. ABCA5 ENSGALG00000004333 3 0.915 - - - - - 0.915 - - - - ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
47. ADORA2B ENSGALG00000014182 26 0.912 - - - - - 0.912 - - - - adenosine A2b receptor [Source:NCBI gene;Acc:395971]
48. ANKRD22 ENSGALG00000028250 130 0.912 - - - - - 0.912 - - - - ankyrin repeat domain 22 [Source:NCBI gene;Acc:771419]
49. FAM19A3 75 0.909 - - - - - - - 0.909 - - family with sequence similarity 19 member A3, C-C motif chemokine like, transcript variant X2
50. ANKRD44 ENSGALG00000007996 17 0.905 - - - - - - - 0.905 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
51. TRAF-5 TRAF-5 102 0.901 - - - - - - - 0.901 - -
52. CCDC96 9 0.899 - - - - - - - 0.899 - - coiled-coil domain containing 96
53. APOAIV APOAIV 5 0.899 - - - - - - - 0.899 - -
54. GINS3 ENSGALG00000031209 32 0.899 - - - - - - - 0.899 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
55. STAB1 21 0.899 - - - - - - - 0.899 - - stabilin 1, transcript variant X2
56. ENSGALG00000019053 ENSGALG00000019053 8 0.899 - - - - - - - 0.899 - -
57. FOXP4 ENSGALG00000033497 13 0.899 - - - - - - - 0.899 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
58. PLB1 PLB1 101 0.899 - - - - - - - 0.899 - -
59. SDR42E2 ENSGALG00000006964 57 0.898 - - - - - - - 0.898 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
60. USP53 ENSGALG00000011990 12 0.898 - - - - - - - 0.898 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
61. GFAP ENSGALG00000000909 21 0.897 - - - - - - - 0.897 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
62. INA ENSGALG00000028238 208 0.896 - - - - - - - 0.896 - - internexin neuronal intermediate filament protein alpha
63. TMCO4 ENSGALG00000004081 31 0.896 - - - - - - - 0.896 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
64. SMYD1 ENSGALG00000015935 75 0.895 - - - - - - - 0.895 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
65. KRT20 ENSGALG00000019716 11 0.895 - - - - - - - 0.895 - - keratin 20 [Source:NCBI gene;Acc:420045]
66. CD4 ENSGALG00000014477 19 0.894 - - - - - - - 0.894 - - CD4 molecule [Source:NCBI gene;Acc:395362]
67. ICOS ENSGALG00000008656 27 0.894 - - - - - - - 0.894 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
68. MMR1L3 ENSGALG00000008638 26 0.894 - - - - - 0.894 - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
69. KIAA0513 ENSGALG00000025938 46 0.894 - - - - - - - 0.894 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
70. GLA ENSGALG00000004948 97 0.891 - - - - - 0.891 - - - - galactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]
71. MAPT ENSGALG00000000625 659 0.89 - - - - - - - 0.890 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
72. SLP76 SLP76 84 0.889 - - - - - 0.889 - - - -
73. ABCA8 ENSGALG00000021399 11 0.888 - - - - - - - 0.888 - - ATP binding cassette subfamily A member 8
74. DNAI2 ENSGALG00000004495 45 0.888 - - - - - - - 0.888 - - dynein axonemal intermediate chain 2
75. LPXN 133 0.887 - - - - - - - 0.887 - - leupaxin, transcript variant X4
76. IRG1 IRG1 21 0.887 - - - - - - - 0.887 - -
77. LOC417973 ENSGALG00000019325 9 0.887 - - - - - - - 0.887 - - uncharacterized LOC417973, transcript variant X1
78. KLRD1 ENSGALG00000014722 27 0.886 - - - - - - - 0.886 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
79. NKAIN1 ENSGALG00000000604 4 0.883 - - - - - 0.883 - - - - sodium/potassium transporting ATPase interacting 1, transcript variant X2
80. ZIC3 ENSGALG00000031144 863 0.881 - - - - - - - 0.881 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
81. AQP12 AQP12 11 0.881 - - - - - - - 0.881 - -
82. ENSGALG00000002444 ENSGALG00000002444 4 0.879 - - - - - 0.879 - - - -
83. CSGALNACT2 ENSGALG00000002543 138 0.879 - - - - - 0.879 - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
84. HAVCR1 ENSGALG00000017362 25 0.878 - - - - - - - 0.878 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
85. ACOT6 ENSGALG00000009292 38 0.877 - - - - - 0.877 - - - - acyl-CoA thioesterase 6 [Source:HGNC Symbol;Acc:HGNC:33159]
86. C9ORF9 C9ORF9 13 0.877 - - - - - 0.877 - - - -
87. CNTN1 ENSGALG00000009523 158 0.877 - - - - - - - 0.877 - - contactin 1 [Source:NCBI gene;Acc:417786]
88. SAMD15 ENSGALG00000010457 69 0.876 - - - - - 0.876 - - - - sterile alpha motif domain containing 15
89. C11orf49 ENSGALG00000008255 36 0.875 - - - - - - - - - 0.875 chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
90. AGMO ENSGALG00000010792 76 0.875 - - - - - 0.875 - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
91. FAM151B ENSGALG00000015577 11 0.875 - - - - - - - - - 0.875 family with sequence similarity 151 member B
92. BTN1A1 ENSGALG00000000589 20 0.875 - - - - - - - - - 0.875 butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
93. C15orf60 C15orf60 16 0.875 - - - - - - - - - 0.875
94. CTSD ENSGALG00000006613 4 0.875 - - - - - - - - - 0.875 cathepsin D [Source:NCBI gene;Acc:396090]
95. PAK2 ENSGALG00000006426 283 0.874 - - - - - - - 0.874 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
96. ADCYAP1R1 ENSGALG00000005223 114 0.87 - - - - - - - 0.870 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
97. NXPH2 ENSGALG00000029083 353 0.868 - - - - - - - 0.868 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
98. ENPP3 ENSGALG00000037587 25 0.865 - - - - - - - 0.865 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
99. EPB41L4A ENSGALG00000000234 113 0.864 - - - - - - - 0.864 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
100. PTPRD ENSGALG00000015058 37 0.861 - - - - - - - 0.861 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]

There are 254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA