Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMO2

Gene Name Gene ID Reads Annotation
LMO2 ENSGALG00000029892 4773 LIM domain only 2 [Source:NCBI gene;Acc:374129]











Genes with expression patterns similar to LMO2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMO2 ENSGALG00000029892 4773 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain only 2 [Source:NCBI gene;Acc:374129]
2. PROS1 ENSGALG00000015409 3685 1.637 - - - - - - 0.827 0.810 - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
3. MGLL ENSGALG00000032736 612 1.465 - - - - - - 0.725 0.740 - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
4. NAA16 ENSGALG00000032808 3366 1.438 - - - - - - 0.734 - - 0.704 N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
5. RAMP2 ENSGALG00000024449 5860 1.423 - - - 0.716 - - - 0.707 - - receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
6. LPAR1 ENSGALG00000015729 3874 0.862 - - - - - - 0.862 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
7. PRNP ENSGALG00000000209 2159 0.855 - - - - - - - 0.855 - - prion protein [Source:NCBI gene;Acc:396452]
8. DMD ENSGALG00000016281 5657 0.851 - - - - - - - 0.851 - - dystrophin [Source:NCBI gene;Acc:396236]
9. PARL ENSGALG00000002315 15943 0.843 - - - - - - 0.843 - - - presenilin associated rhomboid like
10. SMYD1 ENSGALG00000015935 75 0.84 - - - - - - - 0.840 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
11. PRKCE ENSGALG00000010000 99 0.839 - - - - - - - 0.839 - - protein kinase C epsilon, transcript variant X1
12. BMI1 ENSGALG00000041267 6618 0.837 - - - - - - 0.837 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
13. CNTN1 ENSGALG00000009523 158 0.834 - - - - - - - 0.834 - - contactin 1 [Source:NCBI gene;Acc:417786]
14. DAB2 ENSGALG00000003803 6143 0.833 - - - - - - 0.833 - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
15. ARHGAP40 ENSGALG00000003550 484 0.828 - - - - - - - 0.828 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
16. MTDH ENSGALG00000034050 9525 0.82 - - - - - - 0.820 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
17. PAPD7 ENSGALG00000013061 2031 0.816 - - - - - - 0.816 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
18. COPS2 ENSGALG00000000404 8980 0.816 - - - - - - 0.816 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
19. SHROOM2 ENSGALG00000030802 4517 0.813 - - - - - - 0.813 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
20. ENSGALG00000008755 ENSGALG00000008755 3523 0.811 - - - - - - - 0.811 - -
21. ENSGALG00000019430 ENSGALG00000019430 32 0.809 - - - - - - - 0.809 - -
22. PTGFRN ENSGALG00000015464 14584 0.806 - - - - - - - 0.806 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
23. CDC73 ENSGALG00000002469 4586 0.805 - - - - - - 0.805 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
24. HTATSF1 ENSGALG00000006410 3526 0.804 - - - - - - 0.804 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
25. ARPC1B ENSGALG00000032588 2407 0.803 - - - - - - - 0.803 - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
26. TRIP12 ENSGALG00000002929 11713 0.801 - - - - - - 0.801 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
27. HAUS1 ENSGALG00000040397 6195 0.801 - - - - - - 0.801 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
28. CD99 ENSGALG00000024488 10058 0.799 - - - - - - - 0.799 - - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
29. NIPA2 ENSGALG00000016737 3792 0.799 - - - - - - 0.799 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
30. ARHGAP25 ENSGALG00000035194 74 0.799 - - - - - - - 0.799 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
31. DTYMK ENSGALG00000006305 11736 0.799 - - - - - - 0.799 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
32. ITGB3 ENSGALG00000000379 1969 0.798 - - - - - - - 0.798 - - integrin subunit beta 3 [Source:NCBI gene;Acc:374209]
33. ACE ENSGALG00000000498 1398 0.797 - - - - - - - - 0.797 - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
34. MFI2 MFI2 1172 0.797 - - - - - - - 0.797 - -
35. PCDH10 ENSGALG00000009719 483 0.796 - - - - - - - 0.796 - - protocadherin 10 [Source:NCBI gene;Acc:408048]
36. LPXN 133 0.791 - - - - - - - 0.791 - - leupaxin, transcript variant X4
37. CANX ENSGALG00000032148 11297 0.791 - - - - - - 0.791 - - - calnexin [Source:NCBI gene;Acc:416288]
38. COQ7 ENSGALG00000006861 5118 0.791 - - - - - - 0.791 - - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
39. SGMS1 ENSGALG00000003701 2459 0.79 - - - - - - - 0.790 - - sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
40. TRAPPC4 ENSGALG00000007707 3568 0.79 - - - - - - 0.790 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
41. DPYSL3 ENSGALG00000007582 7743 0.79 - - - - - - 0.790 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
42. UBE2V2 ENSGALG00000028133 7044 0.788 - - - - - - 0.788 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
43. UBE2E1 ENSGALG00000011286 5483 0.788 - - - - - - 0.788 - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
44. AMD1 ENSGALG00000039575 8900 0.787 - - - - - - 0.787 - - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
45. KIAA2026 ENSGALG00000015050 4659 0.787 - - - - - - 0.787 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
46. WDR92 ENSGALG00000008760 3934 0.786 - - - - - - 0.786 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
47. RIT1 ENSGALG00000014647 7174 0.785 - - - - - - 0.785 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
48. CDC42SE2 ENSGALG00000027258 4725 0.784 - - - - - - 0.784 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
49. NEK4 ENSGALG00000041428 4473 0.784 - - - - - - 0.784 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
50. LMOD1 ENSGALG00000028721 81 0.784 - - - - - - - 0.784 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
51. VPS29 ENSGALG00000004529 22509 0.782 - - - - - - 0.782 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
52. MMEL1 ENSGALG00000001115 46 0.781 - - - - - - - 0.781 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
53. NXPH2 ENSGALG00000029083 353 0.781 - - - - - - - 0.781 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
54. PARN ENSGALG00000003091 6363 0.779 - - - - - - 0.779 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
55. ELN 765 0.779 - - - - - - - 0.779 - - elastin, transcript variant X24
56. DNPEP ENSGALG00000011318 10623 0.779 - - - - - - 0.779 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
57. PDGFB ENSGALG00000012178 509 0.778 - - - - - - - 0.778 - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
58. TOP3B ENSGALG00000030051 5953 0.778 - - - - - - 0.778 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
59. DIEXF ENSGALG00000009887 4782 0.777 - - - - - - 0.777 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
60. RPS19BP1 ENSGALG00000029810 5768 0.776 - - - - - - 0.776 - - - ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
61. SRP72 ENSGALG00000011403 13666 0.776 - - - - - - 0.776 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
62. UCK1 ENSGALG00000003732 2325 0.775 - - - - - - - 0.775 - - uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:14859]
63. LASP-2 LASP-2 4415 0.775 - - - - - - - 0.775 - -
64. U3 U3 1604 0.775 - - - - - - - 0.775 - -
65. ZFR ENSGALG00000003235 8466 0.774 - - - - - - 0.774 - - - zinc finger RNA binding protein, transcript variant X3
66. HAPLN3 ENSGALG00000021135 1695 0.773 - - - - - - - 0.773 - - hyaluronan and proteoglycan link protein 3 [Source:HGNC Symbol;Acc:HGNC:21446]
67. C5H15ORF29 C5H15ORF29 3709 0.773 - - - - - - 0.773 - - -
68. PRCP ENSGALG00000037521 4012 0.773 - - - - - - - 0.773 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
69. PRSS35 ENSGALG00000015847 52 0.772 - - - - - - - 0.772 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
70. RPE ENSGALG00000002847 7644 0.772 - - - - - - 0.772 - - - ribulose-5-phosphate-3-epimerase, transcript variant X2
71. RALY ENSGALG00000033696 1110 0.772 - - - - - - - 0.772 - - RALY heterogeneous nuclear ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15921]
72. DZANK1 ENSGALG00000008731 120 0.771 - - - - - - - 0.771 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
73. MNR2 ENSGALG00000011349 3340 0.771 - - - - - - - 0.771 - - homeodomain protein
74. RNF185 ENSGALG00000006960 5428 0.771 - - - - - - 0.771 - - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
75. TNFAIP8 ENSGALG00000027761 2383 0.771 - - - - - - 0.771 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
76. IFT74 ENSGALG00000001801 1932 0.771 - - - - - - 0.771 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
77. EIF2D ENSGALG00000000856 8348 0.77 - - - - - - 0.770 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
78. ENSGALG00000019522 ENSGALG00000019522 122 0.77 - - - - - - - 0.770 - -
79. FTSJ2 FTSJ2 2951 0.769 - - - - - - 0.769 - - -
80. CMTM8 ENSGALG00000011484 2826 0.769 - - - - - - - 0.769 - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
81. URM1 ENSGALG00000004971 17880 0.768 - - - - - - 0.768 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
82. TRAF-5 TRAF-5 102 0.768 - - - - - - - 0.768 - -
83. LBP ENSGALG00000006756 1684 0.767 - - 0.767 - - - - - - - lipopolysaccharide binding protein, transcript variant X1
84. RIPK4 ENSGALG00000040189 102 0.767 - - - - - - - 0.767 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
85. MSL3 ENSGALG00000041433 2957 0.767 - - - - - - 0.767 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
86. HS3ST1 ENSGALG00000014934 182 0.766 - - - - - - - 0.766 - - heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]
87. MARK3 ENSGALG00000011505 14846 0.766 - - - - - - 0.766 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
88. SUV39H2 ENSGALG00000013920 4360 0.765 - - - - - - 0.765 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
89. PPM1F ENSGALG00000039121 26 0.764 - - - - - - - 0.764 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
90. JARID2 ENSGALG00000012702 4280 0.764 - - - - - - 0.764 - - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
91. CLDND1 ENSGALG00000039538 5048 0.763 - - - - - - 0.763 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
92. MBNL1 ENSGALG00000029190 3953 0.763 - - - - - - 0.763 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
93. MYOF ENSGALG00000006705 793 0.762 - - - - - - - 0.762 - - myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
94. MPRIP ENSGALG00000004798 6700 0.762 - - - - - - 0.762 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
95. ARL2BP ENSGALG00000034102 2700 0.762 - - - - - - 0.762 - - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
96. XPO1 ENSGALG00000029476 9526 0.761 - - - - - - 0.761 - - - exportin 1 [Source:NCBI gene;Acc:421192]
97. MED16 ENSGALG00000001978 2387 0.761 - - - - - - 0.761 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
98. SEC22B ENSGALG00000039704 16080 0.761 - - - - - - 0.761 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
99. ZYX ENSGALG00000014688 8686 0.761 - - - - - - 0.761 - - - zyxin [Source:NCBI gene;Acc:418300]
100. TMCO4 ENSGALG00000004081 31 0.76 - - - - - - - 0.760 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA