Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMNB2

Gene Name Gene ID Reads Annotation
LMNB2 ENSGALG00000000470 4364 lamin B2 [Source:NCBI gene;Acc:396222]











Genes with expression patterns similar to LMNB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMNB2 ENSGALG00000000470 4364 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin B2 [Source:NCBI gene;Acc:396222]
2. H2AFY_1 ENSGALG00000040141 4895 1.933 - - - - - - 0.965 0.968 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
3. KCTD9 ENSGALG00000000275 3455 1.927 - - - - - - 0.967 0.960 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
4. GCC2 ENSGALG00000016806 1085 1.913 - - 0.921 - - - 0.992 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
5. RRN3 ENSGALG00000041989 3934 1.861 - - 0.888 - - - 0.973 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
6. RBBP6 ENSGALG00000006043 9708 1.826 - - - - - - 0.986 0.840 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
7. THOC2 ENSGALG00000008507 9501 1.823 - - 0.846 - - - 0.977 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
8. SNAPC5 ENSGALG00000007695 4117 1.774 - - 0.788 - - - - 0.986 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
9. LGALS1 ENSGALG00000012420 13993 1.759 - - 0.820 - - - - 0.939 - - galectin 1 [Source:NCBI gene;Acc:396491]
10. NFI1 NFI1 6210 1.74 - - 0.819 - - - - 0.921 - -
11. DUSP19 ENSGALG00000043268 5543 1.739 - - 0.822 - - - 0.917 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
12. WBP11 ENSGALG00000011745 11182 1.736 - - - - - - 0.849 0.887 - - WW domain binding protein 11, transcript variant X1
13. PGS1 ENSGALG00000007181 3187 1.728 - - 0.759 - - - - 0.969 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
14. GTF2E1 ENSGALG00000042320 7712 1.718 - - 0.867 - - - 0.851 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
15. TM9SF3 ENSGALG00000005534 15290 1.715 - - 0.767 - - - 0.948 - - - transmembrane 9 superfamily member 3
16. HDHD2 ENSGALG00000034801 6373 1.697 - - 0.757 - - - - 0.940 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
17. MRPS11 ENSGALG00000006777 16009 1.661 - - 0.767 - - - 0.894 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
18. SELK SELK 15022 1.567 - - 0.867 - - - 0.700 - - -
19. DERL2 ENSGALG00000041844 4509 1.547 - - 0.809 - - - 0.738 - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
20. TPX2 ENSGALG00000006267 26087 1.429 - - 0.723 - - - - 0.706 - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
21. MTFMT ENSGALG00000007353 805 0.993 - - - - - - 0.993 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
22. BCAS1 ENSGALG00000007796 379 0.993 - - - - - - 0.993 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
23. SLC1A1 ENSGALG00000010187 637 0.993 - - - - - - 0.993 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
24. CAMKK2 ENSGALG00000040131 2795 0.992 - - - - - - 0.992 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
25. CETN2 ENSGALG00000007510 1688 0.992 - - - - - - 0.992 - - - centrin 2 [Source:NCBI gene;Acc:422303]
26. UBAC1 ENSGALG00000042564 598 0.992 - - - - - - 0.992 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
27. HACE1 ENSGALG00000015415 1194 0.992 - - - - - - 0.992 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
28. ATP8B1 ENSGALG00000030834 521 0.991 - - - - - - - 0.991 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
29. KLHL29 ENSGALG00000016495 582 0.991 - - - - - - 0.991 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
30. SDCCAG8 ENSGALG00000010713 311 0.991 - - - - - - 0.991 - - - serologically defined colon cancer antigen 8, transcript variant X5
31. SREBF2 ENSGALG00000041687 4519 0.99 - - - - - - 0.990 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
32. POPDC3 ENSGALG00000027420 700 0.99 - - - - - - 0.990 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
33. ENSGALG00000002923 ENSGALG00000002923 2233 0.99 - - - - - - 0.990 - - -
34. IRAK2 ENSGALG00000008407 5934 0.987 - - - - - - 0.987 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
35. DNAJA3 ENSGALG00000007821 3963 0.986 - - - - - - 0.986 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
36. SHQ1 ENSGALG00000007798 1982 0.985 - - - - - - 0.985 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
37. NPHP3 ENSGALG00000034586 1465 0.985 - - - - - - 0.985 - - - nephrocystin 3, transcript variant X1
38. BFAR ENSGALG00000003111 1778 0.984 - - - - - - 0.984 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
39. IMPACT ENSGALG00000015093 1334 0.983 - - - - - - 0.983 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
40. NDUFB8 ENSGALG00000005704 5781 0.982 - - - - - - 0.982 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
41. FAM192A ENSGALG00000021473 10213 0.982 - - - - - - - 0.982 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
42. LEPROTL1 ENSGALG00000024482 4251 0.982 - - - - - - 0.982 - - - leptin receptor overlapping transcript-like 1
43. MOB2 ENSGALG00000030499 3658 0.982 - - - - - - 0.982 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
44. AKAP7 ENSGALG00000029794 3287 0.982 - - - - - - 0.982 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
45. ABCD3 ENSGALG00000005647 4844 0.981 - - - - - - 0.981 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
46. DISP1 3281 0.981 - - - - - - 0.981 - - - dispatched RND transporter family member 1, transcript variant X3
47. EIF4G3 ENSGALG00000010084 5881 0.981 - - - - - - 0.981 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
48. PNO1 ENSGALG00000009093 11153 0.981 - - - - - - 0.981 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
49. MSRA ENSGALG00000028032 2607 0.98 - - - - - - 0.980 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
50. ATN1 ENSGALG00000014554 3270 0.98 - - - - - - 0.980 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
51. METTL11A METTL11A 11876 0.979 - - - - - - 0.979 - - -
52. INTS10 ENSGALG00000010130 6320 0.979 - - - - - - 0.979 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
53. ARHGAP29 ENSGALG00000005683 3622 0.978 - - - - - - 0.978 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
54. MOB1B ENSGALG00000011573 567 0.978 - - - - - - 0.978 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
55. YBX1 ENSGALG00000004848 20992 0.978 - - - - - - 0.978 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
56. MAP1LC3A ENSGALG00000038721 2230 0.977 - - - - - - 0.977 - - - microtubule associated protein 1 light chain 3 alpha
57. RILPL2 ENSGALG00000003321 5632 0.977 - - - - - - 0.977 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
58. MED6 ENSGALG00000029743 9414 0.976 - - - - - - 0.976 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
59. MYST2 MYST2 8078 0.976 - - - - - - 0.976 - - -
60. AP2B1 ENSGALG00000042125 13229 0.975 - - - - - - 0.975 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
61. AK6 ENSGALG00000020534 4791 0.975 - - - - - - 0.975 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
62. UFD1L 12964 0.974 - - - - - - - 0.974 - - ubiquitin fusion degradation 1 like (yeast)
63. ATE1 ENSGALG00000009502 3751 0.974 - - - - - - 0.974 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
64. ACADSB ENSGALG00000041417 7710 0.973 - - - - - - - 0.973 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
65. TMEM100 ENSGALG00000026465 1785 0.972 - - - - - - - 0.972 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
66. ANKRD17 ENSGALG00000011642 3192 0.972 - - - - - - - 0.972 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
67. RBM6 ENSGALG00000035578 1690 0.972 - - - - - - - 0.972 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
68. EI24 ENSGALG00000038097 24081 0.972 - - - - - - 0.972 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
69. FGFRL1 ENSGALG00000037525 1687 0.972 - - - - - - - 0.972 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
70. ENSGALG00000026930 ENSGALG00000026930 681 0.971 - - - - - - - 0.971 - -
71. NAA50 ENSGALG00000033889 3551 0.971 - - - - - - - 0.971 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
72. PAX-6 PAX-6 2650 0.971 - - - - - - - 0.971 - -
73. POLR3E ENSGALG00000007008 4010 0.971 - - - - - - 0.971 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
74. ZMYM4 ENSGALG00000002499 435 0.971 - - - - - - - 0.971 - - zinc finger MYM-type containing 4, transcript variant X1
75. CLCN3 ENSGALG00000009674 3704 0.971 - - - - - - 0.971 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
76. NFASC ENSGALG00000031776 4264 0.971 - - - - - - - 0.971 - - neurofascin [Source:NCBI gene;Acc:419824]
77. gga-mir-1787 ENSGALG00000025542 1373 0.971 - - - - - - - 0.971 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
78. TECPR2 ENSGALG00000011373 1063 0.971 - - - - - - - 0.971 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
79. ADARB1 ENSGALG00000007527 2480 0.97 - - - - - - - 0.970 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
80. FBXW8 ENSGALG00000008207 1639 0.97 - - - - - - - 0.970 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
81. DOCK8 481 0.97 - - - - - - - 0.970 - - dedicator of cytokinesis 8, transcript variant X1
82. gga-mir-6643 ENSGALG00000027935 4442 0.97 - - - - - - 0.970 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
83. SNCAIP ENSGALG00000005330 2425 0.969 - - - - - - - 0.969 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
84. PTPN11 ENSGALG00000004821 2658 0.969 - - - - - - - 0.969 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
85. PPP3R1 ENSGALG00000023648 3417 0.969 - - - - - - 0.969 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
86. TBCCD1 ENSGALG00000006566 2696 0.969 - - - - - - 0.969 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
87. EED ENSGALG00000014060 6467 0.968 - - - - - - - 0.968 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
88. PPT1 ENSGALG00000003936 2540 0.968 - - - - - - - 0.968 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
89. TMEM108 ENSGALG00000036412 2903 0.968 - - - - - - 0.968 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
90. DENND5B 4077 0.968 - - - - - - - 0.968 - - DENN domain containing 5B, transcript variant X1
91. EPS15 ENSGALG00000010543 1598 0.968 - - - - - - - 0.968 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
92. MB21D1 2460 0.967 - - - - - - - 0.967 - - Mab-21 domain containing 1
93. KNOP1 ENSGALG00000002042 6251 0.967 - - - - - - - 0.967 - - lysine-rich nucleolar protein 1, transcript variant X1
94. KIAA1432 KIAA1432 1792 0.967 - - - - - - - 0.967 - -
95. VPS13B 2293 0.966 - - - - - - - 0.966 - - vacuolar protein sorting 13 homolog B
96. MTRF1 ENSGALG00000016951 3983 0.966 - - - - - - - 0.966 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
97. ARID4A ENSGALG00000012037 8554 0.966 - - - - - - 0.966 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
98. ENSGALG00000027854 ENSGALG00000027854 5007 0.964 - - - - - - 0.964 - - -
99. IPO9 ENSGALG00000000397 9263 0.964 - - - - - - - 0.964 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
100. RBM12B ENSGALG00000035129 4314 0.964 - - - - - - 0.964 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]

There are 636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA