Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMNB1

Gene Name Gene ID Reads Annotation
LMNB1 ENSGALG00000014692 529 lamin B1 [Source:NCBI gene;Acc:396223]











Genes with expression patterns similar to LMNB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMNB1 ENSGALG00000014692 529 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin B1 [Source:NCBI gene;Acc:396223]
2. ATG10 ENSGALG00000027714 1100 1.483 - - - - - 0.750 - - 0.733 - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
3. KDELC2 ENSGALG00000017158 479 0.875 - - - - - - - - 0.875 - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
4. BRSK2 ENSGALG00000006681 158 0.84 - - - - - - - - 0.840 - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
5. CHST13 ENSGALG00000029632 391 0.836 - - - - - 0.836 - - - - carbohydrate sulfotransferase 13 [Source:HGNC Symbol;Acc:HGNC:21755]
6. TTC7A ENSGALG00000010020 793 0.833 - - - - - 0.833 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
7. ST3GAL1 ENSGALG00000037773 2014 0.831 - - - - - 0.831 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:NCBI gene;Acc:396140]
8. FBXO34 ENSGALG00000032563 656 0.83 - - - - - - - - 0.830 - F-box protein 34 [Source:NCBI gene;Acc:423554]
9. SPDL1 ENSGALG00000001942 4403 0.829 - - - - - - - - 0.829 - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
10. AMDHD2 ENSGALG00000009234 1730 0.824 - - - - - - - - 0.824 - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
11. DCLRE1A ENSGALG00000008938 1351 0.824 - - - - - - - - 0.824 - DNA cross-link repair 1A [Source:NCBI gene;Acc:423902]
12. LOC419851 ENSGALG00000023953 80 0.82 - - - - - 0.820 - - - - complement component 4 binding protein, alpha chain
13. LAMC3 517 0.819 - - - - - - - - 0.819 - laminin subunit gamma 3
14. UACA ENSGALG00000034100 617 0.818 - - - - - 0.818 - - - - uveal autoantigen with coiled-coil domains and ankyrin repeats
15. MBOAT2 ENSGALG00000016412 194 0.817 - - - - - - - - 0.817 - membrane bound O-acyltransferase domain containing 2 [Source:NCBI gene;Acc:421925]
16. FNDC3B ENSGALG00000009222 4689 0.816 - - - - - 0.816 - - - - fibronectin type III domain containing 3B [Source:NCBI gene;Acc:424984]
17. DUSP12 ENSGALG00000007084 1477 0.814 - - - - - - - - 0.814 - dual specificity phosphatase 12 [Source:NCBI gene;Acc:425349]
18. KIAA0430 268 0.813 - - - - - - - 0.813 - - KIAA0430, transcript variant X4
19. TOPBP1 ENSGALG00000034461 3094 0.811 - - - - - - - - 0.811 - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
20. PNPLA4 ENSGALG00000016618 142 0.811 - - - - - 0.811 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
21. MCC ENSGALG00000000208 61 0.809 - - - - - 0.809 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
22. AQP1 ENSGALG00000005209 111 0.808 - - - - - 0.808 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
23. JAKMIP2 ENSGALG00000007593 95 0.808 - - - - - 0.808 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
24. GCHFR ENSGALG00000032239 1608 0.807 - - - - - 0.807 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
25. CHORDC1 ENSGALG00000035461 2439 0.804 - - - - - - - - 0.804 - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
26. CLASP1 ENSGALG00000011645 1378 0.803 - - - - - 0.803 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
27. GPD1L2 ENSGALG00000012061 31 0.803 - - - - - 0.803 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
28. ENSGALG00000026461 ENSGALG00000026461 61 0.802 - - - - - 0.802 - - - -
29. RAC3 ENSGALG00000040606 355 0.799 - - - - - 0.799 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
30. RAB37 ENSGALG00000027789 17 0.799 - - - - - - - 0.799 - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
31. C1orf168 C1orf168 98 0.798 - - - - - 0.798 - - - -
32. KIF7 ENSGALG00000006611 33 0.795 - - - - - 0.795 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
33. GOLIM4 GOLIM4 2322 0.795 - - - - - 0.795 - - - -
34. SH2D1B ENSGALG00000028448 17 0.795 - - - - - 0.795 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
35. HJURP ENSGALG00000015363 54 0.794 - - - - - 0.794 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
36. OLFML1 ENSGALG00000027184 19 0.794 - - - - - 0.794 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
37. CRCP ENSGALG00000002587 8809 0.791 - - - - - 0.791 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
38. WHAMM ENSGALG00000006002 1678 0.791 - - - - - 0.791 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
39. GTF3C4 ENSGALG00000031016 1221 0.789 - - - - - 0.789 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
40. SGSM2 ENSGALG00000005737 95 0.788 - - - - - 0.788 - - - - small G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29026]
41. BLVRA ENSGALG00000031786 23 0.786 - - - - - 0.786 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
42. NIPAL4 ENSGALG00000039687 29 0.786 - - - - - 0.786 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
43. SLC30A6 ENSGALG00000010618 3197 0.785 - - - - - 0.785 - - - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
44. GPR180 ENSGALG00000016897 1545 0.785 - - - - - - - - 0.785 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
45. ENSGALG00000002946 ENSGALG00000002946 56 0.785 - - - - - 0.785 - - - -
46. BET1 ENSGALG00000024485 2451 0.784 - - - - - 0.784 - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
47. NARFL ENSGALG00000005365 2668 0.78 - - - - - - - - 0.780 - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
48. TPCN3 ENSGALG00000008198 124 0.78 - - - - - 0.780 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
49. DRD4 ENSGALG00000040761 79 0.78 - - - - - 0.780 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
50. FBXO39 ENSGALG00000029322 212 0.779 - - - - - - - 0.779 - - F-box protein 39 [Source:HGNC Symbol;Acc:HGNC:28565]
51. ADNP2 ENSGALG00000035669 318 0.778 - - - - - 0.778 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
52. ZZEF1 ENSGALG00000001546 767 0.778 - - - - - - - 0.778 - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
53. TMEM206 ENSGALG00000009822 80 0.777 - - - - - - - 0.777 - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
54. FAM20A ENSGALG00000040655 934 0.774 - - - - - 0.774 - - - - FAM20A, golgi associated secretory pathway pseudokinase [Source:HGNC Symbol;Acc:HGNC:23015]
55. XPC ENSGALG00000006357 2484 0.773 - - - - - 0.773 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
56. EVC2 ENSGALG00000015029 51 0.773 - - - - - 0.773 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
57. HDHD1 HDHD1 2928 0.77 - - - - - - - - 0.770 -
58. CARKD CARKD 2914 0.769 - - - - - 0.769 - - - -
59. GNAI1 ENSGALG00000008382 195 0.769 - - - - 0.769 - - - - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
60. C1H12ORF4 2696 0.768 - - - - - 0.768 - - - - chromosome 1 open reading frame, human C12orf4
61. TEAD3 ENSGALG00000043513 449 0.767 - - - - - - - 0.767 - - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
62. PACSIN2 ENSGALG00000014159 601 0.767 - - - - - 0.767 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
63. APLF ENSGALG00000008745 887 0.766 - - - - - 0.766 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
64. MXRA5 ENSGALG00000016635 352 0.765 - - - - - 0.765 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
65. POLB ENSGALG00000040828 7462 0.763 - - - - - 0.763 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
66. SMOC2 ENSGALG00000011205 340 0.76 - - - - - 0.760 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
67. SERPINF2 ENSGALG00000002987 236 0.76 - - - - - 0.760 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
68. DSEL ENSGALG00000042505 92 0.759 - - - - - 0.759 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
69. SCAF8 ENSGALG00000013635 421 0.758 - - - - - 0.758 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
70. SARDH ENSGALG00000002855 798 0.758 - - - - - - - - 0.758 - sarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]
71. ENSGALG00000006740 ENSGALG00000006740 30 0.757 - - - - - 0.757 - - - -
72. CDC14A ENSGALG00000005248 502 0.756 - - - - - 0.756 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
73. ELMSAN1 ENSGALG00000009282 79 0.753 - - - - - 0.753 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
74. ARID4A ENSGALG00000012037 8554 0.752 - - - - - - - - 0.752 - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
75. ENSGALG00000014545 ENSGALG00000014545 285 0.752 - - - - - 0.752 - - - -
76. DBT ENSGALG00000005280 2893 0.751 - - - - - 0.751 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
77. C20ORF7 C20ORF7 2383 0.751 - - - - - 0.751 - - - -
78. ABCC3 ENSGALG00000007522 340 0.751 - - - - - 0.751 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
79. YWHAQ ENSGALG00000016433 3450 0.75 - - - - - 0.750 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
80. LRR1 ENSGALG00000012230 1062 0.75 - - - - - 0.750 - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
81. LTC4SL ENSGALG00000011450 645 0.749 - - - - - 0.749 - - - - leukotriene C4 synthase-like, transcript variant X3
82. DIAPH3 ENSGALG00000016937 1069 0.749 - - - - - 0.749 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
83. UBALD1 ENSGALG00000007619 8536 0.748 - - - - - - - - - 0.748 UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
84. LOC776067 ENSGALG00000016808 9164 0.747 - - - - - - - - 0.747 - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
85. GYPC ENSGALG00000011566 99 0.747 - - - - - 0.747 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
86. SERPINB1 ENSGALG00000019555 29 0.746 - - - - - 0.746 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
87. KLHL40 ENSGALG00000005292 61 0.745 - - - - - 0.745 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
88. COBL ENSGALG00000013102 84 0.745 - - - - - 0.745 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
89. MRPL1 ENSGALG00000010324 5972 0.745 - - - - - 0.745 - - - - mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:HGNC:14275]
90. MTSS1 ENSGALG00000041969 1312 0.743 - - - - - 0.743 - - - - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
91. IBTK ENSGALG00000015864 3154 0.743 - - - - - - - - 0.743 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
92. ENSGALG00000012451 ENSGALG00000012451 7912 0.742 - - - - - - - - 0.742 -
93. SLC9A9 ENSGALG00000002374 179 0.742 - - - - - 0.742 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
94. GLRX ENSGALG00000027483 217 0.741 - - - - - - - - 0.741 - glutaredoxin [Source:NCBI gene;Acc:396069]
95. SCYL3 ENSGALG00000036264 2935 0.741 - - - - - - - - 0.741 - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
96. ACN9 ACN9 269 0.74 - - - - - 0.740 - - - -
97. RAD54B ENSGALG00000043597 1699 0.74 - - - - - 0.740 - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
98. UBA6 ENSGALG00000011762 753 0.739 - - - - - 0.739 - - - - ubiquitin like modifier activating enzyme 6 [Source:HGNC Symbol;Acc:HGNC:25581]
99. GOLGA1 ENSGALG00000001025 334 0.739 - - - - - 0.739 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
100. WARS ENSGALG00000011228 193 0.739 - - - - - 0.739 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA