Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMCD1

Gene Name Gene ID Reads Annotation
LMCD1 ENSDARG00000002002 298 LIM and cysteine-rich domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1067]










Genes with expression patterns similar to LMCD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LMCD1 ENSDARG00000002002 298 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM and cysteine-rich domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1067]
2. ror1 ENSDARG00000015176 378 1.705 0.779 0.926 - - - - - - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
3. LRRC8E LRRC8E 495 1.674 - 0.857 - - - - 0.817 - -
4. egfl6 ENSDARG00000045958 335 1.666 - - - - - 0.726 0.940 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
5. polr3a ENSDARG00000102569 1072 1.659 - - - - - 0.825 0.834 - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
6. ube2w ENSDARG00000044923 438 1.641 - 0.903 - - - 0.738 - - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
7. pfas ENSDARG00000003750 296 1.604 - 0.901 - - - 0.703 - - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
8. ATP10B ENSDARG00000076230 989 1.593 - 0.822 - - - 0.771 - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
9. CR762484.3 CR762484.3 395 1.591 - 0.827 - - - - 0.764 - -
10. CABZ01115256.1 CABZ01115256.1 683 1.59 - 0.877 - - - 0.713 - - -
11. rnf114 ENSDARG00000009886 725 1.584 - 0.769 - - - 0.815 - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
12. plekhf2 ENSDARG00000021141 529 1.579 - 0.878 - - - - - - 0.701 pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
13. slc44a1b ENSDARG00000090982 240 1.571 - 0.784 - - - - 0.787 - - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
14. bag5 ENSDARG00000017316 195 1.551 - - - - - 0.799 - - 0.752 BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
15. paf1 ENSDARG00000098432 1806 1.55 - - - - - 0.778 0.772 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
16. agtrap ENSDARG00000077082, ENSDARG00000114680 329 1.546 - 0.801 - - - - 0.745 - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
17. frmd8 ENSDARG00000073696 2661 1.543 - 0.772 - - - - 0.771 - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
18. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.539 - - - - - 0.734 0.805 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
19. NANS NANS 270 1.524 - - - - - 0.773 0.751 - -
20. wdfy2 ENSDARG00000040453 406 1.518 - 0.721 - - - 0.797 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
21. asb13b ENSDARG00000089833 251 1.515 0.709 0.806 - - - - - - - ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
22. anln ENSDARG00000060917 1432 1.502 - 0.703 - - - 0.799 - - - anillin, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4486]
23. GSG2 GSG2 1162 1.487 - 0.762 - - - - 0.725 - -
24. POLDIP3 ENSDARG00000099375 832 1.482 - - - - - 0.768 0.714 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
25. PATZ1 ENSDARG00000076584 1116 1.469 0.725 0.744 - - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
26. tmem167b_1 ENSDARG00000059400 1453 1.462 - - - - - 0.740 0.722 - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
27. ghrhra ENSDARG00000104961 230 1.405 0.704 0.701 - - - - - - - growth hormone releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-050315-2]
28. pm20d1.2 ENSDARG00000062096 97 0.959 - 0.959 - - - - - - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
29. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.947 - 0.947 - - - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
30. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.934 - 0.934 - - - - - - - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
31. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 0.932 - 0.932 - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
32. CEP170B ENSDARG00000074636 336 0.931 - 0.931 - - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
33. arhgef25b ENSDARG00000014465 669 0.929 - 0.929 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
34. serpina10a ENSDARG00000005924 1177 0.927 - 0.927 - - - - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
35. BX649281.3 BX649281.3 808 0.916 - 0.916 - - - - - - -
36. vps18 ENSDARG00000070433 320 0.915 - 0.915 - - - - - - - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
37. ano5b ENSDARG00000036147 89 0.913 - - - - - - 0.913 - - anoctamin 5b [Source:ZFIN;Acc:ZDB-GENE-061215-108]
38. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.913 - - - - - - 0.913 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
39. si:ch211-197g15.8 ENSDARG00000094984 218 0.913 - 0.913 - - - - - - - si:ch211-197g15.8 [Source:ZFIN;Acc:ZDB-GENE-050208-377]
40. rnf123 ENSDARG00000031269 519 0.91 - 0.910 - - - - - - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]
41. CABZ01032488.1 ENSDARG00000099154 262 0.909 - 0.909 - - - - - - - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
42. acsl5 ENSDARG00000075931 880 0.907 - 0.907 - - - - - - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
43. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 0.905 - 0.905 - - - - - - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
44. hmgcs1 ENSDARG00000103025 231 0.905 - 0.905 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
45. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.904 - 0.904 - - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
46. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.903 - 0.903 - - - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
47. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 0.902 - - - - - 0.902 - - - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
48. plcd1b ENSDARG00000034080 4074 0.901 - 0.901 - - - - - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
49. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 0.9 - 0.900 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
50. smarcd2 ENSDARG00000088877 416 0.897 0.897 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
51. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.894 - 0.894 - - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
52. CU638740.1 CU638740.1 398 0.893 - 0.893 - - - - - - -
53. slc44a2 ENSDARG00000037059 1903 0.891 - 0.891 - - - - - - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
54. tmem205 ENSDARG00000100677 101 0.89 - - - - - - 0.890 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
55. stk38a ENSDARG00000019973 1343 0.89 - - - - - - 0.890 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
56. pgpep1 ENSDARG00000054666 489 0.889 - 0.889 - - - - - - - pyroglutamyl-peptidase I [Source:ZFIN;Acc:ZDB-GENE-050522-88]
57. C12H16orf52 C12H16orf52 193 0.889 - 0.889 - - - - - - -
58. calb2b ENSDARG00000036344 2417 0.885 - 0.885 - - - - - - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
59. iqsec2 iqsec2 304 0.885 - - - - - - 0.885 - -
60. VMO1_1 VMO1_1 828 0.885 - 0.885 - - - - - - -
61. CABZ01038494.1 ENSDARG00000088258 908 0.884 - 0.884 - - - - - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
62. ap5m1 ENSDARG00000031533 153 0.883 - 0.883 - - - - - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
63. LRRC29 ENSDARG00000076425 284 0.881 0.881 - - - - - - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
64. MSR1 MSR1 449 0.881 - 0.881 - - - - - - -
65. guk1a ENSDARG00000030340 517 0.878 - - - - - - 0.878 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
66. CLCN4 ENSDARG00000035808 397 0.877 - 0.877 - - - - - - - chloride channel, voltage-sensitive 4 [Source:ZFIN;Acc:ZDB-GENE-061013-353]
67. cacna1sa ENSDARG00000029457 883 0.876 - 0.876 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
68. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.876 - 0.876 - - - - - - - transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
69. NAIF1_1 NAIF1_1 1336 0.875 - - - - - 0.875 - - -
70. ercc4 ENSDARG00000014161 2167 0.871 - 0.871 - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
71. epb41l4b ENSDARG00000061398 721 0.869 - - - - - - 0.869 - - erythrocyte membrane protein band 4.1 like 4B [Source:ZFIN;Acc:ZDB-GENE-100921-92]
72. rgs3b ENSDARG00000035132 876 0.869 - 0.869 - - - - - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
73. enc1 ENSDARG00000035398 1657 0.869 - 0.869 - - - - - - - ectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
74. samd13 ENSDARG00000062977 331 0.869 - - - - - - 0.869 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
75. rad18 ENSDARG00000027938 574 0.867 - - - - - - 0.867 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
76. CABZ01024770.1 CABZ01024770.1 150 0.866 - - - - - - 0.866 - -
77. srrm4 ENSDARG00000086327 153 0.865 - 0.865 - - - - - - - serine/arginine repetitive matrix 4 [Source:ZFIN;Acc:ZDB-GENE-050208-34]
78. ankrd46a ENSDARG00000044328 482 0.864 - 0.864 - - - - - - - ankyrin repeat domain 46a [Source:ZFIN;Acc:ZDB-GENE-030131-2643]
79. tgm5l ENSDARG00000098837 174 0.863 - - - - - - 0.863 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
80. gnb1a ENSDARG00000090454 481 0.862 - - - - - - 0.862 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
81. PLA2G3_1 PLA2G3_1 411 0.86 - 0.860 - - - - - - -
82. pof1b ENSDARG00000054060 2355 0.86 - 0.860 - - - - - - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
83. ZFHX3 ENSDARG00000103057 7759 0.859 - 0.859 - - - - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
84. znf646p znf646p 719 0.858 - - - - - - 0.858 - -
85. si:ch211-193k19.1 ENSDARG00000035660 636 0.857 - - - - - - 0.857 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
86. atp7a ENSDARG00000003699 476 0.856 - - - - - - 0.856 - - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
87. lsr ENSDARG00000099291 881 0.856 - - - - - - 0.856 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
88. zgc:111868 ENSDARG00000099060 68 0.854 - 0.854 - - - - - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
89. angptl4 ENSDARG00000035859 2701 0.854 - 0.854 - - - - - - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
90. sorbs2b ENSDARG00000061603 2491 0.854 - 0.854 - - - - - - - sorbin and SH3 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070308-3]
91. mrpl37 ENSDARG00000062916 1600 0.853 - - - - - 0.853 - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
92. ccdc104 ccdc104 248 0.853 0.853 - - - - - - - -
93. xrcc6bp1 662 0.853 - 0.853 - - - - - - - XRCC6 binding protein 1
94. pla2g7 ENSDARG00000003584 365 0.853 - 0.853 - - - - - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
95. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 0.852 - 0.852 - - - - - - - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
96. hey1 ENSDARG00000070538 986 0.851 - - - - - - 0.851 - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
97. CHST5 CHST5 1293 0.851 - 0.851 - - - - - - -
98. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 0.85 - - - - - - 0.850 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
99. sh3gl3a ENSDARG00000013360 3602 0.85 - 0.850 - - - - - - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
100. ubn2 ubn2 534 0.849 - - - - - - 0.849 - -

There are 1071 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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