Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMCD1

Gene Name Gene ID Reads Annotation
LMCD1 ENSGALG00000008349 928 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]











Genes with expression patterns similar to LMCD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMCD1 ENSGALG00000008349 928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
2. PCGF2 ENSGALG00000018815 38 1.688 - - - - - 0.752 0.936 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
3. ANKS1B ENSGALG00000011549 440 1.681 - - 0.742 - - - 0.939 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
4. PARVA ENSGALG00000005438 91 1.584 - - 0.738 - - - 0.846 - - - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
5. SCARB1 ENSGALG00000046226 428 1.546 - - 0.814 - - - - - - 0.732 scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
6. FAM107B ENSGALG00000033226 1539 1.501 - - 0.766 - - - 0.735 - - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
7. MMRN2 770 1.496 - - 0.739 - - - 0.757 - - - multimerin 2, transcript variant X1
8. KAZALD1 ENSGALG00000007837 2463 1.484 - - - - - - - 0.725 0.759 - Kazal type serine peptidase inhibitor domain 1 [Source:HGNC Symbol;Acc:HGNC:25460]
9. ENDOV 121 0.937 - - - - - - 0.937 - - - endonuclease V
10. VTI1B ENSGALG00000009526 133 0.936 - - - - - - 0.936 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
11. RIPPLY2 ENSGALG00000015845 34 0.932 - - - - - - 0.932 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
12. NAPRT1 NAPRT1 227 0.931 - - - - - - 0.931 - - -
13. C18H17ORF67 ENSGALG00000024428 10 0.93 - - - - - - 0.930 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
14. ANO3 ENSGALG00000013311 16 0.93 - - - - - - 0.930 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
15. TEX2 ENSGALG00000003496 23 0.93 - - - - - - 0.930 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
16. DCBLD1 ENSGALG00000014907 19 0.93 - - - - - - 0.930 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
17. MUC5B MUC5B 62 0.93 - - - - - - 0.930 - - -
18. MAP3K1 ENSGALG00000014718 60 0.93 - - - - - - 0.930 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
19. ENSGALG00000023475 ENSGALG00000023475 19 0.93 - - - - - - 0.930 - - -
20. NCOA6 ENSGALG00000001182 83 0.929 - - - - - - 0.929 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
21. POFUT1 ENSGALG00000006594 367 0.925 - - - - - - 0.925 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
22. KRT222 ENSGALG00000003859 53 0.924 - - - - - - 0.924 - - - keratin 222 [Source:NCBI gene;Acc:420046]
23. MOCOS ENSGALG00000013149 25 0.923 - - - - - - 0.923 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
24. LAMP1 ENSGALG00000037697 247 0.923 - - - - - - 0.923 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
25. ENSGALG00000029120 ENSGALG00000029120 73 0.919 - - - - - - 0.919 - - -
26. KCTD5 ENSGALG00000006423 192 0.919 - - - - - - 0.919 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
27. C9orf171 C9orf171 35 0.918 - - - - - - 0.918 - - -
28. TSPAN14 ENSGALG00000002414 69 0.918 - - - - - - 0.918 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
29. SVOPL ENSGALG00000012812 27 0.917 - - - - - - 0.917 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
30. ENSGALG00000001515 ENSGALG00000001515 833 0.914 - - - - - - 0.914 - - -
31. NKD1 ENSGALG00000003767 76 0.913 - - - - - - 0.913 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
32. CADM2 ENSGALG00000043393 810 0.91 - - - - - - 0.910 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
33. LOC770996 ENSGALG00000016570 635 0.908 - - - - - - 0.908 - - - L-gulonolactone oxidase-like
34. ENSGALG00000014900 ENSGALG00000014900 335 0.907 - - - - - - 0.907 - - -
35. MKX ENSGALG00000007426 65 0.904 - - - - - - 0.904 - - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]
36. FAM21A FAM21A 251 0.902 - - - - - - 0.902 - - -
37. CPNE1 ENSGALG00000040856 610 0.902 - - - - - - 0.902 - - - copine 1 [Source:NCBI gene;Acc:419134]
38. C1orf168 C1orf168 98 0.902 - - 0.902 - - - - - - -
39. ENSGALG00000020753 ENSGALG00000020753 159 0.902 - - - - - - 0.902 - - -
40. YTHDC1 ENSGALG00000035906 471 0.902 - - - - - - 0.902 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
41. RAB8B ENSGALG00000003487 295 0.901 - - - - - - 0.901 - - - RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
42. GRIA2 ENSGALG00000009405 275 0.901 - - - - - - 0.901 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
43. KYNU ENSGALG00000012418 353 0.9 - - - - - - 0.900 - - - kynureninase, transcript variant X3
44. SNORD2 SNORD2 51 0.9 - - - - - - 0.900 - - -
45. AGL ENSGALG00000005407 93 0.899 - - - - - - 0.899 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
46. FAM82B FAM82B 374 0.898 - - - - - - 0.898 - - -
47. PCP4 ENSGALG00000022819 880 0.897 - - - - - - 0.897 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
48. PYROXD1 ENSGALG00000013173 89 0.897 - - - - - - 0.897 - - - pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
49. PLCXD1 ENSGALG00000016721 289 0.896 - - - - - - 0.896 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
50. ATP6V1AL ENSGALG00000000048 21 0.895 - - - - - - 0.895 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
51. GHDC ENSGALG00000003333 178 0.894 - - - - - - 0.894 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
52. TC2N ENSGALG00000010738 92 0.893 - - - - - - 0.893 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
53. ZNF148 ENSGALG00000012049 365 0.893 - - - - - - 0.893 - - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
54. FGB ENSGALG00000009262 1169 0.892 - - - - - - 0.892 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
55. MLF1 ENSGALG00000009654 619 0.891 - - - - - - 0.891 - - - myeloid leukemia factor 1, transcript variant X3
56. COL4A2 ENSGALG00000016843 261 0.891 - - - - - - 0.891 - - - collagen type IV alpha 2 chain [Source:NCBI gene;Acc:418752]
57. TP53I3 ENSGALG00000016502 178 0.891 - - - - - - 0.891 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
58. LOC100857820 ENSGALG00000001824 16 0.89 - - - - - - 0.890 - - - uncharacterized LOC100857820
59. ZDHHC5 ENSGALG00000007362 296 0.89 - - - - - - 0.890 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
60. RELN ENSGALG00000008193 43 0.889 - - - - - - 0.889 - - - reelin [Source:NCBI gene;Acc:427850]
61. IFT27 ENSGALG00000042990 221 0.889 - - - - - - 0.889 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
62. RSFR 61 0.888 - - - - - - 0.888 - - - leukocyte ribonuclease A-2
63. TSPAN4 ENSGALG00000006837 150 0.886 - - - - - - 0.886 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
64. NPTN ENSGALG00000001741 481 0.884 - - - - - - 0.884 - - - neuroplastin [Source:NCBI gene;Acc:415316]
65. ASB13 ENSGALG00000008401 181 0.884 - - - - - - 0.884 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
66. HTR2C ENSGALG00000005853 90 0.882 - - - - - - 0.882 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
67. KNDC1 ENSGALG00000007007 31 0.88 - - 0.880 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
68. FBXL18 ENSGALG00000004611 97 0.88 - - - - - - 0.880 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
69. HRSP12 HRSP12 1165 0.88 - - - - - - 0.880 - - -
70. TDRD5 ENSGALG00000033634 40 0.88 - - - - - - 0.880 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
71. ARHGAP15 ENSGALG00000012421 58 0.88 - - - - - - 0.880 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
72. PDE4D ENSGALG00000014727 53 0.879 - - - - - - 0.879 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
73. ELK4 ENSGALG00000042137 69 0.879 - - - - - - 0.879 - - - ELK4, ETS transcription factor
74. RCL1 ENSGALG00000015024 133 0.878 - - - - - - 0.878 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
75. GATA4 ENSGALG00000016662 6 0.876 - - 0.876 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
76. ENSGALG00000012463 ENSGALG00000012463 242 0.876 - - - - - - 0.876 - - -
77. DENND6B ENSGALG00000043771 22 0.876 - - 0.876 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
78. VEPH1 ENSGALG00000009682 51 0.876 - - 0.876 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
79. FAM76B ENSGALG00000017202 688 0.875 - - - - - - 0.875 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
80. CPNE7 ENSGALG00000000507 54 0.875 - - - - - - 0.875 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
81. ZP2 ENSGALG00000002428 10 0.874 - - 0.874 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
82. CENPQ ENSGALG00000016692 293 0.873 - - 0.873 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
83. LRRC2 ENSGALG00000013634 69 0.873 - - - - - - 0.873 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
84. APBA2 ENSGALG00000003930 408 0.871 - - - - - - 0.871 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
85. UIMC1 ENSGALG00000001158 22 0.871 - - 0.871 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
86. LSM14B ENSGALG00000005125 31 0.869 - - 0.869 - - - - - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
87. PLA1A ENSGALG00000014997 152 0.867 - - 0.867 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
88. TRAF3IP3 ENSGALG00000001373 11 0.867 - - 0.867 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
89. TPTE2 ENSGALG00000017031 29 0.866 - - 0.866 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
90. CAPN6 ENSGALG00000008006 16 0.866 - - 0.866 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
91. CRK ENSGALG00000002656 15 0.864 - - 0.864 - - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
92. SP2 ENSGALG00000000233 43 0.864 - - 0.864 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
93. PALMD ENSGALG00000005442 901 0.863 - - - - - - - - - 0.863 palmdelphin [Source:NCBI gene;Acc:424475]
94. SCN4B ENSGALG00000007409 22 0.862 - - 0.862 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
95. KBTBD8 ENSGALG00000007569 20 0.862 - - - - - - - - - 0.862 kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
96. FGF22 ENSGALG00000041822 37 0.862 - - 0.862 - - - - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
97. NSUN5 ENSGALG00000000891 1356 0.861 - - - - - - 0.861 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
98. TRIM71 ENSGALG00000019622 1633 0.861 - - - - - - 0.861 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
99. LZTS3 ENSGALG00000016001 3 0.86 - - - - - - - - - 0.860 leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
100. CACNA1D ENSGALG00000005332 34 0.86 - - 0.860 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]

There are 346 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA