Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIX1

Gene Name Gene ID Reads Annotation
LIX1 ENSGALG00000015290 7589 limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]











Genes with expression patterns similar to LIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIX1 ENSGALG00000015290 7589 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
2. TUBB6 ENSGALG00000031275 17690 2.431 - - 0.701 - - - 0.797 0.933 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
3. BAMBI ENSGALG00000040993 7562 2.422 - 0.815 - - - 0.858 - - - 0.749 BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
4. ISL1 ENSGALG00000014884 7666 2.32 - 0.815 - 0.746 - 0.759 - - - - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
5. RDH10 ENSGALG00000034346 15285 1.735 - - - - - 0.882 0.853 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
6. GREB1 ENSGALG00000016455 12794 1.718 - - - - - 0.757 - 0.961 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
7. KRT19 ENSGALG00000019719 38711 1.695 - - - - - 0.860 - - - 0.835 keratin 19 [Source:NCBI gene;Acc:395861]
8. HLX ENSGALG00000037257 5834 1.674 - - - - - 0.901 0.773 - - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
9. CREG1 ENSGALG00000040426 1188 1.672 - - - - - - - 0.960 0.712 - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
10. PPDPF ENSGALG00000005849 16711 1.582 - - - - - - 0.748 - 0.834 - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
11. HBE 329974 1.567 - - - - - - - 0.832 0.735 - hemoglobin subunit epsilon
12. ANXA1 ENSGALG00000015148 13804 1.553 - - - - - 0.736 0.817 - - - annexin A1 [Source:NCBI gene;Acc:404271]
13. TCF21 ENSGALG00000029024 8252 1.55 - - - - 0.701 0.849 - - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
14. MDK ENSGALG00000008367 316136 1.539 - - 0.765 - - 0.774 - - - - midkine [Source:NCBI gene;Acc:423196]
15. BMP4 ENSGALG00000012429 4306 1.534 - - - - - 0.822 0.712 - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
16. MME ENSGALG00000010331 757 1.499 0.742 - - - - - - - 0.757 - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
17. LGALS3 ENSGALG00000012173 3306 1.493 - 0.764 - - - - - - 0.729 - galectin 3 [Source:NCBI gene;Acc:373917]
18. HBG1 HBG1 468163 1.468 - - - - - - - 0.748 0.720 -
19. COMMD10 ENSGALG00000002308 7442 0.978 - - - - - - - 0.978 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
20. NDUFA9 ENSGALG00000017282 14358 0.977 - - - - - - - 0.977 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
21. DRG1 ENSGALG00000006921 10791 0.976 - - - - - - - 0.976 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
22. C14orf1 C14orf1 14289 0.972 - - - - - - - 0.972 - -
23. PSMC3IP ENSGALG00000019741 5428 0.972 - - - - - - - 0.972 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
24. KRR1 ENSGALG00000010227 11783 0.971 - - - - - - - 0.971 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
25. ERP44 ENSGALG00000013452 5352 0.97 - - - - - - - 0.970 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
26. ISY1 ENSGALG00000005012 7477 0.968 - - - - - - - 0.968 - - ISY1 splicing factor homolog
27. KIF18B ENSGALG00000031553 3192 0.968 - - - - - - - 0.968 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
28. ASAH1 ENSGALG00000026364 2783 0.968 - - - - - - - 0.968 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
29. COMMD8 ENSGALG00000026279 13509 0.966 - - - - - - - 0.966 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
30. DCAF4 ENSGALG00000009345 2604 0.966 - - - - - - - 0.966 - - DDB1 and CUL4 associated factor 4
31. PI4K2B ENSGALG00000031538 2607 0.965 - - - - - - - 0.965 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
32. GTF3A ENSGALG00000017098 9264 0.965 - - - - - - - 0.965 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
33. DDX54 ENSGALG00000007490 8729 0.964 - - - - - - - 0.964 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
34. ADAT1 ENSGALG00000000908 1484 0.964 - - - - - - - 0.964 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
35. EXOC8 ENSGALG00000043280 3596 0.963 - - - - - - - 0.963 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
36. MAN2C1 ENSGALG00000001615 2362 0.962 - - - - - - - 0.962 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
37. MRPL22 ENSGALG00000003919 2760 0.962 - - - - - - - 0.962 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
38. KIF21A ENSGALG00000007098 5919 0.961 - - - - - - - 0.961 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
39. NHLRC1 ENSGALG00000012688 1476 0.961 - - - - - - - 0.961 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
40. IQCK ENSGALG00000028197 596 0.96 - - - - - - - 0.960 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
41. FOCAD ENSGALG00000015071 3677 0.959 - - - - - - - 0.959 - - focadhesin [Source:NCBI gene;Acc:427233]
42. HGS ENSGALG00000007224 3487 0.959 - - - - - - - 0.959 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
43. RFWD2 1215 0.958 - - - - - - - 0.958 - - ring finger and WD repeat domain 2, transcript variant X6
44. AIF1L ENSGALG00000029834 13866 0.958 - - - - - - - 0.958 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
45. DACT1 ENSGALG00000012023 1008 0.957 - - - - - - - 0.957 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
46. NUMA1 ENSGALG00000001258 8406 0.957 - - - - - - - 0.957 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
47. TP73 ENSGALG00000001006 335 0.956 - - - - - - - 0.956 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
48. PALB2 ENSGALG00000006078 1549 0.955 - - - - - - - 0.955 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
49. ZDHHC14 ENSGALG00000013695 2648 0.949 - - - - - - - 0.949 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
50. RERE ENSGALG00000002232 8724 0.948 - - - - - - - 0.948 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
51. PIGQ ENSGALG00000001985 1584 0.948 - - - - - - - 0.948 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
52. COMT ENSGALG00000002024 2483 0.944 - - - - - - - 0.944 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
53. SS18 ENSGALG00000015119 4687 0.942 - - - - - - - 0.942 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
54. ERP29 ENSGALG00000023510 47100 0.933 - - - - - - - 0.933 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
55. EI24 ENSGALG00000038097 24081 0.93 - - - - - - - 0.930 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
56. ATG3 ENSGALG00000015204 11277 0.924 - - - - - - - 0.924 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
57. HOXA4 ENSGALG00000022622 22327 0.918 - - - - - - - 0.918 - - homeobox A4 [Source:NCBI gene;Acc:395307]
58. RABIF ENSGALG00000000436 6449 0.916 - - - - - - - 0.916 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
59. LSM5 ENSGALG00000041625 22307 0.913 - - - - - - - 0.913 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
60. ATP6V1C1 ENSGALG00000034099 9898 0.906 - - - - - - - 0.906 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
61. TF ENSGALG00000006453 14007 0.897 - - - - - - - - 0.897 - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
62. BCAR1 ENSGALG00000042895 8222 0.894 - - - - - - - 0.894 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
63. CIDEA ENSGALG00000034500 405 0.893 - - - - - - - - 0.893 - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
64. RIOK3 ENSGALG00000015004 4249 0.893 - - - - - - - 0.893 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
65. EHD3 ENSGALG00000009086 14407 0.886 - - - - - - - 0.886 - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
66. BTBD1 ENSGALG00000006020 14157 0.881 - - - - - - - 0.881 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
67. GPC3 ENSGALG00000006087 3744 0.88 - - - - - 0.880 - - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
68. FYTTD1 ENSGALG00000007581 9341 0.879 - - - - - - - 0.879 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
69. EIF3M ENSGALG00000012109 38661 0.875 - - - - - - - 0.875 - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
70. PCBD1 ENSGALG00000027835 18019 0.871 - - - - - - - - 0.871 - pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
71. SRMS ENSGALG00000005852 174 0.87 - - - - - - - - 0.870 - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
72. HAND1 ENSGALG00000035104 2351 0.868 - - - - - 0.868 - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
73. EVX1 ENSGALG00000037310 1974 0.867 - 0.867 - - - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
74. PRELP ENSGALG00000034456 4354 0.862 - - - - - - - 0.862 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
75. ZRANB2 ENSGALG00000011340 18994 0.861 - - - - - - - 0.861 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
76. SGSM3 ENSGALG00000012033 1839 0.86 - - - - - - - 0.860 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
77. MORF4L1 ENSGALG00000008146 29940 0.856 - - - - - - - 0.856 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
78. BMP5 ENSGALG00000016293 2119 0.856 - - - - - - - - - 0.856 bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
79. PMPCA ENSGALG00000001950 6766 0.855 - - - - - - - 0.855 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
80. HRAS1 HRAS1 7988 0.845 - - - - - - - 0.845 - -
81. METAP2 ENSGALG00000011377 16311 0.843 - - - - - - - 0.843 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
82. IP6K2 ENSGALG00000005701 12539 0.842 - - - - - - - 0.842 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
83. ENSGALG00000024035 ENSGALG00000024035 544 0.841 - - - - - - - - 0.841 -
84. UPK3BL ENSGALG00000001885 1650 0.841 - 0.841 - - - - - - - - uroplakin 3B-like
85. RARRES1 ENSGALG00000009594 3573 0.84 - - - - - - - - 0.840 - retinoic acid receptor responder 1 [Source:NCBI gene;Acc:395209]
86. WASF1 ENSGALG00000015066 5628 0.84 - - - - - - - 0.840 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
87. NPHS2 ENSGALG00000004163 850 0.84 - - - - - - - - 0.840 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
88. HSPD1 ENSGALG00000008094 40870 0.838 - - - - - - - 0.838 - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
89. YTHDF2 ENSGALG00000034831 15118 0.833 - - - - - - - 0.833 - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
90. FASTKD2 ENSGALG00000008529 7439 0.833 - - - - - - - 0.833 - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
91. BMI1 ENSGALG00000041267 6618 0.829 - - - - - - - 0.829 - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
92. ID2 ENSGALG00000035016 22120 0.825 - - - - - 0.825 - - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
93. NFKBIZ ENSGALG00000015346 770 0.825 - - - - - - - - 0.825 - NFKB inhibitor zeta [Source:NCBI gene;Acc:418404]
94. LOC395095 ENSGALG00000028374 195 0.825 - 0.825 - - - - - - - - keratin, transcript variant X1
95. CUL3 ENSGALG00000005108 9571 0.825 - - - - - - - 0.825 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
96. NAV2 ENSGALG00000003999 6587 0.823 - - - - - 0.823 - - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
97. DCDC2 ENSGALG00000042454 2306 0.822 - - - - - - - - 0.822 - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
98. DHCR7 ENSGALG00000004106 4731 0.822 - - - - - - - 0.822 - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
99. TCF7L2 ENSGALG00000008883 13688 0.82 - - - - - 0.820 - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
100. COLEC10 ENSGALG00000033144 3436 0.82 - - - - - 0.820 - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA