Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LITAF

Gene Name Gene ID Reads Annotation
LITAF ENSGALG00000003217 7 lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]











Genes with expression patterns similar to LITAF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LITAF ENSGALG00000003217 7 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000 lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
2. GTPBP6 ENSGALG00000016717 17 1.808 - - - - 1.000 - - 0.808 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
3. TLR3 ENSGALG00000013468 35 1.789 - - - - 0.789 - 1.000 - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
4. FAM43B ENSGALG00000026367 2 1.566 - - - - - 0.761 - - - 0.805 family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
5. TLR7 ENSGALG00000016590 6 1.546 - - - - - 0.761 0.785 - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
6. ENSGALG00000015905 ENSGALG00000015905 5 1 - - - - 1.000 - - - - -
7. ARHGEF17 6 1 - - - - - - - - - 1.000 Rho guanine nucleotide exchange factor 17
8. PGP ENSGALG00000005888 1 1 - - - - 1.000 - - - - - phosphoglycolate phosphatase [Source:NCBI gene;Acc:416559]
9. ENSGALG00000017269 ENSGALG00000017269 13 1 - - - - 1.000 - - - - -
10. VPS37C ENSGALG00000038541 169 1 - - - - 1.000 - - - - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
11. AIM1 51 1 - - - - 1.000 - - - - - absent in melanoma 1, transcript variant X2
12. BAP1 ENSGALG00000004366 12 1 - - - - 1.000 - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
13. RAG1 ENSGALG00000007938 1 1 - - - - 1.000 - - - - - recombination activating 1 [Source:NCBI gene;Acc:423164]
14. TUBA4B ENSGALG00000011324 19 1 - - - - 1.000 - - - - - tubulin alpha 4b
15. PNKD ENSGALG00000022166 595 1 - - - - 1.000 - - - - - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
16. ACMSD ENSGALG00000012197 1 1 - - - - 1.000 - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:HGNC Symbol;Acc:HGNC:19288]
17. ENSGALG00000016257 ENSGALG00000016257 4 1 - - - - 1.000 - - - - -
18. SCAMP4 ENSGALG00000001030 29 1 - - - - 1.000 - - - - - secretory carrier membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:30385]
19. TTLL2 ENSGALG00000011344 14 1 - - - - 1.000 - - - - - tubulin tyrosine ligase like 2, transcript variant X1
20. CHRM2 ENSGALG00000012894 21 1 - - - 1.000 - - - - - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
21. C1orf177 C1orf177 1 1 - - - - 1.000 - - - - -
22. CMTR1 ENSGALG00000010149 12 1 - - - - 1.000 - - - - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
23. EXOC5 ENSGALG00000012105 23 1 - - - - 1.000 - - - - - exocyst complex component 5 [Source:NCBI gene;Acc:423549]
24. LPAR6 ENSGALG00000016998 36 1 - - - - 1.000 - - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
25. POLR3K ENSGALG00000017681 298 1 - - - - 1.000 - - - - - RNA polymerase III subunit K [Source:HGNC Symbol;Acc:HGNC:14121]
26. ENSGALG00000028584 ENSGALG00000028584 4 1 - - - - 1.000 - - - - -
27. IPMK ENSGALG00000002710 40 1 - - - - 1.000 - - - - - inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
28. LOC423752 ENSGALG00000020899 17 1 - - - - 1.000 - - - - - uncharacterized LOC423752, transcript variant X1
29. VWA3B ENSGALG00000040709 5 1 - - - - 1.000 - - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
30. HRH2L ENSGALG00000015953 1 1 - - - - 1.000 - - - - - histamine H2 receptor-like, transcript variant X3
31. SP5 ENSGALG00000034094 130 1 - - - - 1.000 - - - - - Sp5 transcription factor [Source:NCBI gene;Acc:693261]
32. P2RX7 ENSGALG00000003863 7 1 - - - - 1.000 - - - - - purinergic receptor P2X 7 [Source:HGNC Symbol;Acc:HGNC:8537]
33. SERPINB1 ENSGALG00000019555 29 1 - - - - 1.000 - - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
34. ENSGALG00000001004 ENSGALG00000001004 17 1 - - - - 1.000 - - - - -
35. SLC10A2 ENSGALG00000016858 4 1 - - - - 1.000 - - - - - Gallus gallus solute carrier family 10 member 2 (SLC10A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319027]
36. ISOC1 ENSGALG00000000161 46 0.963 - - - - - - - 0.963 - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
37. SPAG16 ENSGALG00000003148 35 0.96 - - - - - - - - - 0.960 sperm associated antigen 16 [Source:HGNC Symbol;Acc:HGNC:23225]
38. DVL3 ENSGALG00000008414 38 0.941 - - - - - 0.941 - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
39. SPATA6 ENSGALG00000010502 16 0.94 - - - - - - - - - 0.940 spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
40. STK32A ENSGALG00000029195 27 0.92 - - - - - - - 0.920 - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
41. SLC16A6 ENSGALG00000004162 21 0.898 - - - - - 0.898 - - - - solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]
42. ATMIN ENSGALG00000040475 16 0.888 - - - - 0.888 - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
43. MYL2_1 ENSGALG00000004582 2367 0.873 - - - - - 0.873 - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
44. SEPN1 SEPN1 58 0.871 - - - - - - - - - 0.871
45. DACT2 ENSGALG00000011288 358 0.852 - - - - - 0.852 - - - - dishevelled binding antagonist of beta catenin 2 [Source:HGNC Symbol;Acc:HGNC:21231]
46. B-BTN2 B-BTN2 1 0.849 - - - 0.849 - - - - - -
47. TMEM56 ENSGALG00000005580 10 0.849 - - - 0.849 - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
48. P2RY4 ENSGALG00000004346 11 0.849 - - - 0.849 - - - - - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
49. AIFM3 ENSGALG00000007720 28 0.849 - - - 0.849 - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
50. ENSGALG00000027945 ENSGALG00000027945 2 0.849 - - - 0.849 - - - - - -
51. TPP1 52 0.849 - - - 0.849 - - - - - - tripeptidyl peptidase 1
52. C6orf58 ENSGALG00000045522 2 0.849 - - - 0.849 - - - - - - chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
53. ENSGALG00000028667 ENSGALG00000028667 1 0.849 - - - 0.849 - - - - - -
54. C15orf60 C15orf60 16 0.849 - - - 0.849 - - - - - -
55. PDX1 ENSGALG00000038454 1 0.849 - - - 0.849 - - - - - - pancreatic and duodenal homeobox 1
56. C14orf159 C14orf159 7 0.849 - - - 0.849 - - - - - -
57. ENSGALG00000027164 ENSGALG00000027164 8 0.849 - - - 0.849 - - - - - -
58. GABRA4 ENSGALG00000014202 1 0.849 - - - 0.849 - - - - - - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
59. SCN9A ENSGALG00000027793 161 0.836 - - - - - - - 0.836 - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
60. ENSGALG00000028936 ENSGALG00000028936 57 0.83 - - - - - - 0.830 - - -
61. gga-mir-10a ENSGALG00000021952 4 0.824 - - - - - - - - - 0.824 gga-mir-10a [Source:miRBase;Acc:MI0007559]
62. NADSYN1 ENSGALG00000004153 8 0.818 - - - - - - - - - 0.818 NAD synthetase 1 [Source:NCBI gene;Acc:422983]
63. SEC61A1 ENSGALG00000005966 9 0.814 - - - - - - - - - 0.814 Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
64. TBC1D8B ENSGALG00000009040 75 0.811 - - - - - - - 0.811 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
65. ENSGALG00000023027 ENSGALG00000023027 5 0.808 - - - - - - - 0.808 - -
66. GABRA5 ENSGALG00000016744 12 0.808 - - - - - - - 0.808 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
67. ACACB 6 0.808 - - - - - - - 0.808 - - acetyl-CoA carboxylase beta
68. SPATA4 ENSGALG00000010822 4 0.808 - - - - - - - 0.808 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
69. TREM-B1 ENSGALG00000003361 8 0.808 - - - - - - - 0.808 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
70. MUC13 7 0.808 - - - - - - - 0.808 - - mucin 13, cell surface associated, transcript variant X10
71. DBN1 ENSGALG00000033405 216 0.808 - - - - - - - 0.808 - - drebrin 1 [Source:NCBI gene;Acc:396496]
72. snoZ39 snoZ39 2 0.808 - - - - - - - 0.808 - -
73. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.808 - - - - - - - 0.808 - - family with sequence similarity 214 member B, transcript variant X14
74. ALKBH3 ENSGALG00000041309 7 0.808 - - - - - - - 0.808 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
75. SLC30A8 ENSGALG00000034377 3 0.808 - - - - - - - 0.808 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
76. ENSGALG00000023353 ENSGALG00000023353 1 0.808 - - - - - - - 0.808 - -
77. CD101 12 0.808 - - - - - - - 0.808 - - CD101 molecule, transcript variant X4
78. GP5 ENSGALG00000045125 3 0.808 - - - - - - - 0.808 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
79. CDHR1 ENSGALG00000002314 24 0.808 - - - - - - - 0.808 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
80. GSAP ENSGALG00000008312 12 0.808 - - - - - - - 0.808 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
81. SOX10 ENSGALG00000012290 3942 0.808 - - - - - - - 0.808 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
82. ENSGALG00000028652 ENSGALG00000028652 65 0.808 - - - - - - - 0.808 - -
83. HBP1 ENSGALG00000008050 19 0.808 - - - - - - - 0.808 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
84. SUSD1 ENSGALG00000015677 12 0.808 - - - - - - - 0.808 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
85. C1orf228 3 0.808 - - - - - - - 0.808 - - chromosome 1 open reading frame 228, transcript variant X5
86. SFT2D2 ENSGALG00000019228 10 0.808 - - - - - - - 0.808 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
87. CPM ENSGALG00000009945 140 0.808 - - - - - - 0.808 - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
88. GPR17 ENSGALG00000037153 3 0.808 - - - - - - - 0.808 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
89. ENSGALG00000011567 ENSGALG00000011567 2 0.805 - - - - - - - - - 0.805
90. ENSGALG00000015172 ENSGALG00000015172 1 0.805 - - - - - - - - - 0.805
91. CAMK4L ENSGALG00000015203 5 0.805 - - - - - - - - - 0.805 calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
92. CCNJL ENSGALG00000040152 4 0.805 - - - - - - - - - 0.805 cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
93. ENSGALG00000016269 ENSGALG00000016269 3 0.805 - - - - - - - - - 0.805
94. THSD1 ENSGALG00000028083 2 0.805 - - - - - - - - - 0.805 thrombospondin type 1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17754]
95. GCNT1 ENSGALG00000015166 4 0.805 - - - - - - - - - 0.805 glucosaminyl (N-acetyl) transferase 1, core 2 [Source:HGNC Symbol;Acc:HGNC:4203]
96. gga-mir-19b-2 ENSGALG00000028596 3 0.805 - - - - - - - - - 0.805 gga-mir-19b-2 [Source:miRBase;Acc:MI0029332]
97. BRPF3 8 0.805 - - - - - - - - - 0.805 bromodomain and PHD finger containing, 3, transcript variant X2
98. ENSGALG00000020738 ENSGALG00000020738 2 0.805 - - - - - - - - - 0.805
99. uc_1 uc_1 1 0.805 - - - - - - - - - 0.805
100. SWAP70 ENSGALG00000005750 32 0.805 - - - - - - - 0.805 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]

There are 133 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA