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Results for LINC01556

Gene Name Gene ID Reads Annotation
LINC01556 ENSG00000204709, ENSG00000206526, ENSG00000231041, ENSG00000233566, ENSG00000237313, ENSG00000237634 7 long intergenic non-protein coding RNA 1556 [Source:HGNC Symbol;Acc:HGNC:21195]



Genes with expression patterns similar to LINC01556

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01556 ENSG00000204709, ENSG00000206526, ENSG00000231041, ENSG00000233566, ENSG00000237313, ENSG00000237634 7 2 1.000 1.000 long intergenic non-protein coding RNA 1556 [Source:HGNC Symbol;Acc:HGNC:21195]
2. C19orf83 C19orf83 5 1 1.000 -
3. LINC00887 ENSG00000214145 28 1 1.000 - long intergenic non-protein coding RNA 887 [Source:HGNC Symbol;Acc:HGNC:48574]
4. ABCC11 ENSG00000121270 1 0.853 - 0.853 ATP binding cassette subfamily C member 11 [Source:HGNC Symbol;Acc:HGNC:14639]
5. FPR2 ENSG00000171049 2 0.85 - 0.850 formyl peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:3827]
6. LOC101928401 2 0.85 - 0.850 uncharacterized LOC101928401
7. LOC100144595 0 0.845 - 0.845 uncharacterized LOC100144595
8. DEFB125 ENSG00000178591 0 0.845 - 0.845 defensin beta 125 [Source:HGNC Symbol;Acc:HGNC:18105]
9. LINC00881 ENSG00000241135 0 0.845 - 0.845 long intergenic non-protein coding RNA 881 [Source:HGNC Symbol;Acc:HGNC:48567]
10. LINC01143 ENSG00000237751 1 0.845 - 0.845 long intergenic non-protein coding RNA 1143 [Source:HGNC Symbol;Acc:HGNC:49458]
11. PHOSPHO1 ENSG00000173868 2 0.845 - 0.845 phosphoethanolamine/phosphocholine phosphatase [Source:HGNC Symbol;Acc:HGNC:16815]
12. PDCD1 ENSG00000188389, ENSG00000276977 3 0.845 - 0.845 programmed cell death 1 [Source:HGNC Symbol;Acc:HGNC:8760]
13. TMC3-AS1 ENSG00000259343 1 0.845 - 0.845 TMC3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51424]
14. LINC00298 ENSG00000235665 1 0.845 - 0.845 long intergenic non-protein coding RNA 298 [Source:HGNC Symbol;Acc:HGNC:49257]
15. SELE ENSG00000007908 0 0.845 - 0.845 selectin E [Source:HGNC Symbol;Acc:HGNC:10718]
16. LOC102606466 0 0.845 - 0.845 uncharacterized LOC102606466
17. ZNF705D ENSG00000215343 2 0.835 - 0.835 zinc finger protein 705D [Source:HGNC Symbol;Acc:HGNC:33202]
18. LVRN ENSG00000172901 7 0.834 - 0.834 laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
19. HSPA7 ENSG00000225217 7 0.831 - 0.831 heat shock protein family A (Hsp70) member 7 [Source:HGNC Symbol;Acc:HGNC:5240]
20. LINC00917 ENSG00000168367 1 0.829 - 0.829 long intergenic non-protein coding RNA 917 [Source:HGNC Symbol;Acc:HGNC:48607]
21. SBSN ENSG00000189001 2 0.828 - 0.828 suprabasin [Source:HGNC Symbol;Acc:HGNC:24950]
22. SLC23A1 ENSG00000170482 5 0.825 - 0.825 solute carrier family 23 member 1 [Source:HGNC Symbol;Acc:HGNC:10974]
23. C8orf87 ENSG00000279847 1 0.813 - 0.813 chromosome 8 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:42974]
24. PPP1R42 ENSG00000178125 2 0.795 - 0.795 protein phosphatase 1 regulatory subunit 42 [Source:HGNC Symbol;Acc:HGNC:33732]
25. CETN4P ENSG00000224786 3 0.775 - 0.775 centrin 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:35450]
26. RPL13P5 ENSG00000240370 10 0.771 0.771 - ribosomal protein L13 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:30363]
27. LOC158435 7 0.752 - 0.752 uncharacterized LOC158435
28. PYY ENSG00000131096 5 0.717 0.717 - peptide YY [Source:HGNC Symbol;Acc:HGNC:9748]
29. AP2A1 ENSG00000196961 5 0.717 0.717 - adaptor related protein complex 2 subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:561]
30. SLC39A2 ENSG00000165794 10 0.717 0.717 - solute carrier family 39 member 2 [Source:HGNC Symbol;Acc:HGNC:17127]
31. ZNF727 ENSG00000214652 3 0.717 0.717 - zinc finger protein 727 [Source:HGNC Symbol;Acc:HGNC:22785]
32. CTB-7E3.1 2 0.717 0.717 - uncharacterized LOC102557615
33. NXPE1 ENSG00000095110 3 0.717 0.717 - neurexophilin and PC-esterase domain family member 1 [Source:HGNC Symbol;Acc:HGNC:28527]
34. CSF3 ENSG00000108342 2 0.717 0.717 - colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]
35. RBMXL2 ENSG00000170748 6 0.717 0.717 - RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]
36. LOC101927311 2 0.717 0.717 - uncharacterized LOC101927311
37. TNFSF18 ENSG00000120337 2 0.717 0.717 - TNF superfamily member 18 [Source:HGNC Symbol;Acc:HGNC:11932]
38. ACSM5 ENSG00000183549 2 0.717 0.717 - acyl-CoA synthetase medium chain family member 5 [Source:HGNC Symbol;Acc:HGNC:26060]
39. GRIP2 ENSG00000144596 6 0.717 0.717 - glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]
40. PRKRIP1 ENSG00000128563 8 0.717 0.717 - PRKR interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21894]
41. GRHL3 ENSG00000158055 6 0.717 0.717 - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
42. PCDHA10 ENSG00000250120 7 0.717 0.717 - protocadherin alpha 10 [Source:HGNC Symbol;Acc:HGNC:8664]
43. MAP3K19 ENSG00000176601 11 0.717 0.717 - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
44. LOC101928894 2 0.717 0.717 - uncharacterized LOC101928894
45. LOC101927472 6 0.717 0.717 - uncharacterized LOC101927472
46. FOLR3 ENSG00000110203 5 0.717 0.717 - folate receptor 3 [Source:HGNC Symbol;Acc:HGNC:3795]
47. MIR218-1 ENSG00000207732 3 0.717 0.717 - microRNA 218-1 [Source:HGNC Symbol;Acc:HGNC:31595]
48. LNX1-AS2 ENSG00000248494 3 0.717 0.717 - LNX1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41450]
49. C6orf201 ENSG00000185689 6 0.717 0.717 - chromosome 6 open reading frame 201 [Source:HGNC Symbol;Acc:HGNC:21620]
50. LINC01091 ENSG00000249464 3 0.717 0.717 - long intergenic non-protein coding RNA 1091 [Source:HGNC Symbol;Acc:HGNC:27721]
51. FAM183B FAM183B 2 0.717 0.717 -
52. GLP2R ENSG00000065325 256 0.717 0.717 - glucagon like peptide 2 receptor [Source:HGNC Symbol;Acc:HGNC:4325]
53. SKAP1 ENSG00000141293 52 0.716 0.716 - src kinase associated phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15605]
54. MIR31HG ENSG00000171889 14 0.703 0.703 - MIR31 host gene [Source:HGNC Symbol;Acc:HGNC:37187]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA