Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01548

Gene Name Gene ID Reads Annotation
LINC01548 ENSG00000229086 5 long intergenic non-protein coding RNA 1548 [Source:HGNC Symbol;Acc:HGNC:1296]



Genes with expression patterns similar to LINC01548

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01548 ENSG00000229086 5 2 1.000 1.000 long intergenic non-protein coding RNA 1548 [Source:HGNC Symbol;Acc:HGNC:1296]
2. MIR630 ENSG00000283798 6 1.817 1.000 0.817 microRNA 630 [Source:HGNC Symbol;Acc:HGNC:32886]
3. GFI1 ENSG00000162676 13 1 1.000 - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
4. LINC01320 ENSG00000228262 16 1 - 1.000 long intergenic non-protein coding RNA 1320 [Source:HGNC Symbol;Acc:HGNC:50526]
5. CFHR4 ENSG00000134365 5 1 1.000 - complement factor H related 4 [Source:HGNC Symbol;Acc:HGNC:16979]
6. OXCT2 ENSG00000198754 2 1 1.000 - 3-oxoacid CoA-transferase 2 [Source:HGNC Symbol;Acc:HGNC:18606]
7. LINC00440 ENSG00000234660 2 1 - 1.000 long intergenic non-protein coding RNA 440 [Source:HGNC Symbol;Acc:HGNC:42777]
8. NT5C1B-RDH14 ENSG00000250741 2 1 - 1.000 NT5C1B-RDH14 readthrough [Source:HGNC Symbol;Acc:HGNC:38831]
9. LINC00463 ENSG00000234056 4 1 - 1.000 long intergenic non-protein coding RNA 463 [Source:HGNC Symbol;Acc:HGNC:42813]
10. ADGRG7 ENSG00000144820 2 1 - 1.000 adhesion G protein-coupled receptor G7 [Source:HGNC Symbol;Acc:HGNC:19241]
11. HLA-DRB6 ENSG00000229391 3 1 1.000 - major histocompatibility complex, class II, DR beta 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4954]
12. SRGAP2-AS1 ENSG00000230806 2 1 - 1.000 SRGAP2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40902]
13. LOC388406 2 1 1.000 - uncharacterized LOC388406
14. SNORA11B ENSG00000221102 2 1 1.000 - small nucleolar RNA, H/ACA box 11B [Source:HGNC Symbol;Acc:HGNC:33620]
15. ITLN2 ENSG00000158764 2 1 1.000 - intelectin 2 [Source:HGNC Symbol;Acc:HGNC:20599]
16. PRM1 ENSG00000175646 4 1 - 1.000 protamine 1 [Source:HGNC Symbol;Acc:HGNC:9447]
17. MIR3607 2 1 - 1.000 microRNA 3607
18. CLLU1OS ENSG00000205057 2 1 - 1.000 chronic lymphocytic leukemia up-regulated 1 opposite strand [Source:HGNC Symbol;Acc:HGNC:24070]
19. LINC00620 ENSG00000224514 3 1 1.000 - long intergenic non-protein coding RNA 620 [Source:HGNC Symbol;Acc:HGNC:44223]
20. CCDC155 ENSG00000161609 3 1 1.000 - coiled-coil domain containing 155 [Source:HGNC Symbol;Acc:HGNC:26520]
21. LOC101927987 2 1 - 1.000 uncharacterized LOC101927987
22. LHX8 ENSG00000162624 3 1 - 1.000 LIM homeobox 8 [Source:HGNC Symbol;Acc:HGNC:28838]
23. FOXD4L1 ENSG00000184492 4 1 1.000 - forkhead box D4 like 1 [Source:HGNC Symbol;Acc:HGNC:18521]
24. TPO ENSG00000115705, ENSG00000277603 9 1 1.000 - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
25. LINC01358 ENSG00000237352 4 1 1.000 - long intergenic non-protein coding RNA 1358 [Source:HGNC Symbol;Acc:HGNC:50589]
26. SPDYE1 ENSG00000136206 3 1 1.000 - speedy/RINGO cell cycle regulator family member E1 [Source:HGNC Symbol;Acc:HGNC:16408]
27. OR5E1P ENSG00000170688, ENSG00000280497, ENSG00000281056 2 1 - 1.000 olfactory receptor family 5 subfamily E member 1 pseudogene [Source:HGNC Symbol;Acc:HGNC:8342]
28. C22orf34 ENSG00000188511 2 1 1.000 - chromosome 22 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:28010]
29. FMO9P ENSG00000215834 2 1 1.000 - flavin containing monooxygenase 9 pseudogene [Source:HGNC Symbol;Acc:HGNC:32210]
30. PCAT18 ENSG00000265369 2 0.998 - 0.998 prostate cancer associated transcript 18 [Source:HGNC Symbol;Acc:HGNC:49211]
31. PROX2 ENSG00000119608 2 0.994 - 0.994 prospero homeobox 2 [Source:HGNC Symbol;Acc:HGNC:26715]
32. LINC01120 ENSG00000223631 2 0.994 - 0.994 long intergenic non-protein coding RNA 1120 [Source:HGNC Symbol;Acc:HGNC:49265]
33. PCDHA2 ENSG00000204969 6 0.976 - 0.976 protocadherin alpha 2 [Source:HGNC Symbol;Acc:HGNC:8668]
34. SCARNA4 ENSG00000280466, ENSG00000281394 2 0.973 - 0.973 small Cajal body-specific RNA 4 [Source:HGNC Symbol;Acc:HGNC:32560]
35. SNORA31 ENSG00000199477 2 0.97 - 0.970 small nucleolar RNA, H/ACA box 31 [Source:HGNC Symbol;Acc:HGNC:32621]
36. NIPAL1 ENSG00000163293 9 0.943 - 0.943 NIPA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
37. LOC101929550 5 0.935 - 0.935 uncharacterized LOC101929550
38. MIR137HG ENSG00000225206 7 0.931 - 0.931 MIR137 host gene [Source:HGNC Symbol;Acc:HGNC:42871]
39. SNORA38 ENSG00000200816, ENSG00000263879, ENSG00000263994, ENSG00000264153, ENSG00000265754, ENSG00000266004, ENSG00000266847 2 0.92 - 0.920 small nucleolar RNA, H/ACA box 38 [Source:HGNC Symbol;Acc:HGNC:32631]
40. HSPA4L ENSG00000164070 23 0.913 - 0.913 heat shock protein family A (Hsp70) member 4 like [Source:HGNC Symbol;Acc:HGNC:17041]
41. GPR18 ENSG00000125245 2 0.905 - 0.905 G protein-coupled receptor 18 [Source:HGNC Symbol;Acc:HGNC:4472]
42. COX6B2 ENSG00000160471 11 0.902 - 0.902 cytochrome c oxidase subunit 6B2 [Source:HGNC Symbol;Acc:HGNC:24380]
43. ZNF699 ENSG00000196110 3 0.878 - 0.878 zinc finger protein 699 [Source:HGNC Symbol;Acc:HGNC:24750]
44. COLCA1 ENSG00000196167 30 0.876 - 0.876 colorectal cancer associated 1 [Source:HGNC Symbol;Acc:HGNC:33789]
45. DSCAM-AS1 ENSG00000235123 10 0.873 - 0.873 DSCAM antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40197]
46. DKFZp451B082 ENSG00000285564 5 0.868 - 0.868 uncharacterized LOC401282 [Source:NCBI gene;Acc:401282]
47. TMEM72-AS1 ENSG00000224812 24 0.861 - 0.861 TMEM72 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27349]
48. ADRB1 ENSG00000043591 19 0.853 - 0.853 adrenoceptor beta 1 [Source:HGNC Symbol;Acc:HGNC:285]
49. CXCL13 ENSG00000156234 15 0.846 0.846 - C-X-C motif chemokine ligand 13 [Source:HGNC Symbol;Acc:HGNC:10639]
50. LOC101926897 16 0.84 0.840 - uncharacterized LOC101926897
51. KRTAP5-7 ENSG00000244411 5 0.825 0.825 - keratin associated protein 5-7 [Source:HGNC Symbol;Acc:HGNC:23602]
52. IQUB ENSG00000164675 27 0.823 - 0.823 IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
53. LOC100507534 3 0.821 - 0.821 uncharacterized LOC100507534
54. MYH1 ENSG00000109061 8 0.818 0.818 - myosin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:7567]
55. LRRC73 ENSG00000204052 16 0.817 0.817 - leucine rich repeat containing 73 [Source:HGNC Symbol;Acc:HGNC:21375]
56. FEZF2 ENSG00000153266 10 0.813 - 0.813 FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13506]
57. LOC101927697 10 0.804 0.804 - uncharacterized LOC101927697
58. CPN2 ENSG00000178772 85 0.791 - 0.791 carboxypeptidase N subunit 2 [Source:HGNC Symbol;Acc:HGNC:2313]
59. LOC100130744 11 0.79 - 0.790 uncharacterized LOC100130744
60. ACER2 ENSG00000177076 29 0.788 - 0.788 alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
61. SLC26A3 ENSG00000091138 6 0.787 - 0.787 solute carrier family 26 member 3 [Source:HGNC Symbol;Acc:HGNC:3018]
62. LKAAEAR1 ENSG00000171695 19 0.786 0.786 - LKAAEAR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:33718]
63. SLC18A2 ENSG00000165646 56 0.786 0.786 - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
64. RIPPLY2 ENSG00000203877 5 0.784 0.784 - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
65. UCP3 ENSG00000175564 65 0.779 - 0.779 uncoupling protein 3 [Source:HGNC Symbol;Acc:HGNC:12519]
66. SLC22A18AS ENSG00000254827, ENSG00000274454 16 0.778 0.778 - solute carrier family 22 member 18 antisense [Source:HGNC Symbol;Acc:HGNC:10965]
67. PGBD4 ENSG00000182405 31 0.777 - 0.777 piggyBac transposable element derived 4 [Source:HGNC Symbol;Acc:HGNC:19401]
68. LRRC39 ENSG00000122477 13 0.765 0.765 - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
69. SNORA12 ENSG00000212464 118 0.749 - 0.749 small nucleolar RNA, H/ACA box 12 [Source:HGNC Symbol;Acc:HGNC:32600]
70. INE2 ENSG00000281371 3 0.746 0.746 - inactivation escape 2 [Source:HGNC Symbol;Acc:HGNC:6061]
71. KHK ENSG00000138030 41 0.746 0.746 - ketohexokinase [Source:HGNC Symbol;Acc:HGNC:6315]
72. AGAP2-AS1 ENSG00000255737 11 0.744 0.744 - AGAP2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48633]
73. WBP2NL ENSG00000183066 24 0.744 0.744 - WBP2 N-terminal like [Source:HGNC Symbol;Acc:HGNC:28389]
74. PNMAL2 41 0.739 0.739 - paraneoplastic Ma antigen family-like 2
75. FAM57B ENSG00000149926 119 0.73 0.730 - family with sequence similarity 57 member B [Source:HGNC Symbol;Acc:HGNC:25295]
76. RARRES1 ENSG00000118849 35 0.729 0.729 - retinoic acid receptor responder 1 [Source:HGNC Symbol;Acc:HGNC:9867]
77. CYP39A1 ENSG00000146233 244 0.724 - 0.724 cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
78. DLX4 ENSG00000108813 8 0.723 0.723 - distal-less homeobox 4 [Source:HGNC Symbol;Acc:HGNC:2917]
79. TMEFF2 ENSG00000144339 69 0.721 0.721 - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
80. PKD1L3 ENSG00000277481 3 0.719 - 0.719 polycystin 1 like 3, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:21716]
81. SLCO6A1 ENSG00000205359 4 0.717 0.717 - solute carrier organic anion transporter family member 6A1 [Source:HGNC Symbol;Acc:HGNC:23613]
82. HIST1H2AC ENSG00000180573 14 0.713 0.713 - histone cluster 1 H2A family member c [Source:HGNC Symbol;Acc:HGNC:4733]
83. DNAJC28 ENSG00000177692, ENSG00000262911 28 0.71 - 0.710 DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
84. BRINP2 ENSG00000198797 12 0.707 0.707 - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
85. LOC100190940 12 0.707 - 0.707 uncharacterized LOC100190940
86. SOWAHD ENSG00000187808 8 0.707 - 0.707 sosondowah ankyrin repeat domain family member D [Source:HGNC Symbol;Acc:HGNC:32960]
87. ERICH6B ENSG00000165837 6 0.704 - 0.704 glutamate rich 6B [Source:HGNC Symbol;Acc:HGNC:26523]
88. LOC101928353 LOC101928353 13 0.704 0.704 -
89. EPB41L4A-AS2 52 0.704 0.704 - EPB41L4A antisense RNA 2 (head to head)
90. LRRC38 ENSG00000162494 13 0.703 0.703 - leucine rich repeat containing 38 [Source:HGNC Symbol;Acc:HGNC:27005]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA