Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01396

Gene Name Gene ID Reads Annotation
LINC01396 ENSG00000273396 3 long intergenic non-protein coding RNA 1396 [Source:HGNC Symbol;Acc:HGNC:50675]



Genes with expression patterns similar to LINC01396

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01396 ENSG00000273396 3 2 1.000 1.000 long intergenic non-protein coding RNA 1396 [Source:HGNC Symbol;Acc:HGNC:50675]
2. LINC00244 ENSG00000279418 2 1 1.000 - long intergenic non-protein coding RNA 244 [Source:HGNC Symbol;Acc:HGNC:13245]
3. LOC100129520 LOC100129520 3 1 1.000 -
4. C11orf44 ENSG00000175728 2 1 1.000 - chromosome 11 open reading frame 44 [Source:HGNC Symbol;Acc:HGNC:26805]
5. MTMR8 ENSG00000102043 4 1 1.000 - myotubularin related protein 8 [Source:HGNC Symbol;Acc:HGNC:16825]
6. HRNR ENSG00000197915 2 1 1.000 - hornerin [Source:HGNC Symbol;Acc:HGNC:20846]
7. MTRNR2L7 ENSG00000256892 4 1 1.000 - MT-RNR2 like 7 [Source:HGNC Symbol;Acc:HGNC:37164]
8. FOXN1 ENSG00000109101 2 1 1.000 - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
9. HNRNPKP3 ENSG00000251557 24 1 1.000 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:42376]
10. SLC35G5 ENSG00000177710, ENSG00000285084 12 1 1.000 - solute carrier family 35 member G5 [Source:HGNC Symbol;Acc:HGNC:15546]
11. MAGEB16 ENSG00000189023 2 1 1.000 - MAGE family member B16 [Source:HGNC Symbol;Acc:HGNC:21188]
12. FAM71D ENSG00000172717 2 1 1.000 - family with sequence similarity 71 member D [Source:HGNC Symbol;Acc:HGNC:20101]
13. LOC102723604 2 1 1.000 - uncharacterized LOC102723604
14. ZRANB2-AS2 ENSG00000229956 12 1 1.000 - ZRANB2 antisense RNA 2 (head to head) [Source:HGNC Symbol;Acc:HGNC:43595]
15. FAM205BP ENSG00000257198 2 1 1.000 - family with sequence similarity 205 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:24504]
16. MAPT-AS1 ENSG00000264589, ENSG00000281578, ENSG00000282067 2 1 1.000 - MAPT antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:43738]
17. WNT8B ENSG00000075290 2 1 1.000 - Wnt family member 8B [Source:HGNC Symbol;Acc:HGNC:12789]
18. OCM ENSG00000122543 12 1 1.000 - oncomodulin [Source:HGNC Symbol;Acc:HGNC:8105]
19. LOC643711 2 1 1.000 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 pseudogene, transcript variant 2
20. LOC102723968 5 1 1.000 - uncharacterized LOC102723968
21. LOC101927583 3 1 1.000 - uncharacterized LOC101927583
22. DRAIC ENSG00000245750 11 1 1.000 - downregulated RNA in cancer, inhibitor of cell invasion and migration [Source:HGNC Symbol;Acc:HGNC:27082]
23. FAM71B ENSG00000170613 2 1 1.000 - family with sequence similarity 71 member B [Source:HGNC Symbol;Acc:HGNC:28397]
24. GKN2 ENSG00000183607 2 1 1.000 - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
25. LOC100506470 2 1 1.000 - uncharacterized LOC100506470
26. LIPJ ENSG00000204022 10 1 1.000 - lipase family member J [Source:HGNC Symbol;Acc:HGNC:21773]
27. LINC00381 ENSG00000226240 3 1 1.000 - long intergenic non-protein coding RNA 381 [Source:HGNC Symbol;Acc:HGNC:42708]
28. PARGP1 ENSG00000239883 8 1 1.000 - poly(ADP-ribose) glycohydrolase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:45008]
29. KIRREL3-AS2 ENSG00000254960 2 1 1.000 - KIRREL3 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:42656]
30. IL5 ENSG00000113525 2 1 1.000 - interleukin 5 [Source:HGNC Symbol;Acc:HGNC:6016]
31. FPR3 ENSG00000187474 3 1 1.000 - formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]
32. F11-AS1 ENSG00000251165 5 1 1.000 - F11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27725]
33. HTR3E ENSG00000186038 2 1 1.000 - 5-hydroxytryptamine receptor 3E [Source:HGNC Symbol;Acc:HGNC:24005]
34. LOC101928797 5 1 1.000 - uncharacterized LOC101928797
35. KCNU1 ENSG00000215262 2 1 1.000 - potassium calcium-activated channel subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:18867]
36. SIRPG ENSG00000089012 6 1 1.000 - signal regulatory protein gamma [Source:HGNC Symbol;Acc:HGNC:15757]
37. TAS2R60 ENSG00000185899, ENSG00000285341 2 1 1.000 - taste 2 receptor member 60 [Source:HGNC Symbol;Acc:HGNC:20639]
38. LOC101928231 8 1 1.000 - uncharacterized LOC101928231
39. LINC01222 ENSG00000233410 2 1 1.000 - long intergenic non-protein coding RNA 1222 [Source:HGNC Symbol;Acc:HGNC:49672]
40. LOC101929439 2 1 1.000 - uncharacterized LOC101929439
41. LOC100130872 2 1 1.000 - uncharacterized LOC100130872
42. LINC01192 ENSG00000241369 3 1 1.000 - long intergenic non-protein coding RNA 1192 [Source:HGNC Symbol;Acc:HGNC:37197]
43. DNASE2B ENSG00000137976 4 0.996 - 0.996 deoxyribonuclease 2 beta [Source:HGNC Symbol;Acc:HGNC:28875]
44. ANKRD34C ENSG00000235711 10 0.996 - 0.996 ankyrin repeat domain 34C [Source:HGNC Symbol;Acc:HGNC:33888]
45. NPIPA8 ENSG00000214940 1 0.996 - 0.996 nuclear pore complex interacting protein family member A8 [Source:HGNC Symbol;Acc:HGNC:41983]
46. LINC00640 ENSG00000258479 2 0.996 - 0.996 long intergenic non-protein coding RNA 640 [Source:HGNC Symbol;Acc:HGNC:44291]
47. CD177 ENSG00000204936 5 0.992 - 0.992 CD177 molecule [Source:HGNC Symbol;Acc:HGNC:30072]
48. CFHR4 ENSG00000134365 5 0.984 - 0.984 complement factor H related 4 [Source:HGNC Symbol;Acc:HGNC:16979]
49. CLEC12A ENSG00000172322 4 0.983 - 0.983 C-type lectin domain family 12 member A [Source:HGNC Symbol;Acc:HGNC:31713]
50. HSF4 ENSG00000102878 20 0.982 - 0.982 heat shock transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:5227]
51. PRKX-AS1 ENSG00000236188 6 0.976 - 0.976 PRKX antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40479]
52. CCDC144NL ENSG00000205212 6 0.976 - 0.976 coiled-coil domain containing 144 family, N-terminal like [Source:HGNC Symbol;Acc:HGNC:33735]
53. TACR3 ENSG00000169836 3 0.965 - 0.965 tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]
54. LINC00871 ENSG00000258700 14 0.962 - 0.962 long intergenic non-protein coding RNA 871 [Source:HGNC Symbol;Acc:HGNC:47038]
55. DSG1 ENSG00000134760 5 0.939 0.939 - desmoglein 1 [Source:HGNC Symbol;Acc:HGNC:3048]
56. EPO ENSG00000130427 14 0.938 - 0.938 erythropoietin [Source:HGNC Symbol;Acc:HGNC:3415]
57. SLC9C2 ENSG00000162753 4 0.937 - 0.937 solute carrier family 9 member C2 (putative) [Source:HGNC Symbol;Acc:HGNC:28664]
58. LINC00548 12 0.921 0.921 - long intergenic non-protein coding RNA 548
59. HIST1H3A ENSG00000275714 26 0.906 - 0.906 histone cluster 1 H3 family member a [Source:HGNC Symbol;Acc:HGNC:4766]
60. SCN10A ENSG00000185313 1 0.893 - 0.893 sodium voltage-gated channel alpha subunit 10 [Source:HGNC Symbol;Acc:HGNC:10582]
61. DYNAP ENSG00000178690 17 0.868 0.868 - dynactin associated protein [Source:HGNC Symbol;Acc:HGNC:26808]
62. VTRNA1-3 ENSG00000202515 2 0.842 - 0.842 vault RNA 1-3 [Source:HGNC Symbol;Acc:HGNC:12656]
63. LOC285804 5 0.839 0.839 - uncharacterized LOC285804
64. MS4A14 ENSG00000166928 13 0.838 - 0.838 membrane spanning 4-domains A14 [Source:HGNC Symbol;Acc:HGNC:30706]
65. DIAPH2-AS1 ENSG00000236256 6 0.835 0.835 - DIAPH2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16972]
66. BTLA ENSG00000186265 8 0.824 - 0.824 B and T lymphocyte associated [Source:HGNC Symbol;Acc:HGNC:21087]
67. GPBAR1 ENSG00000179921 28 0.808 - 0.808 G protein-coupled bile acid receptor 1 [Source:HGNC Symbol;Acc:HGNC:19680]
68. PROK2 ENSG00000163421 2 0.808 - 0.808 prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
69. LOC100287592 17 0.806 0.806 - uncharacterized LOC100287592
70. TSTD2 ENSG00000136925 122 0.806 0.806 - thiosulfate sulfurtransferase like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30087]
71. LYPLA2P2 ENSG00000269153 4 0.806 0.806 - lysophospholipase II pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:50445]
72. ISPD-AS1 ENSG00000229688 3 0.806 0.806 - ISPD antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48962]
73. ALOXE3 ENSG00000179148 3 0.806 0.806 - arachidonate lipoxygenase 3 [Source:HGNC Symbol;Acc:HGNC:13743]
74. MOV10L1 ENSG00000073146 9 0.802 - 0.802 Mov10 like RISC complex RNA helicase 1 [Source:HGNC Symbol;Acc:HGNC:7201]
75. LOC102723828 2 0.8 - 0.800 uncharacterized LOC102723828
76. PCDHGC3 ENSG00000240184 7 0.796 - 0.796 protocadherin gamma subfamily C, 3 [Source:HGNC Symbol;Acc:HGNC:8716]
77. INHA ENSG00000123999 22 0.793 - 0.793 inhibin subunit alpha [Source:HGNC Symbol;Acc:HGNC:6065]
78. LOC100506368 8 0.79 - 0.790 uncharacterized LOC100506368
79. LINC00578 ENSG00000228221 14 0.787 0.787 - long intergenic non-protein coding RNA 578 [Source:HGNC Symbol;Acc:HGNC:43807]
80. C10orf32-ASMT C10orf32-ASMT 5 0.783 - 0.783
81. FAM171A2 ENSG00000161682 2 0.782 - 0.782 family with sequence similarity 171 member A2 [Source:HGNC Symbol;Acc:HGNC:30480]
82. SPTY2D1-AS1 25 0.781 - 0.781 SPTY2D1 antisense RNA 1
83. SH2D3A ENSG00000125731 7 0.777 - 0.777 SH2 domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16885]
84. CTD-2201I18.1 ENSG00000249825 8 0.771 - 0.771 uncharacterized LOC101929215 [Source:NCBI gene;Acc:101929215]
85. ADGRE3 ENSG00000131355 4 0.771 0.771 - adhesion G protein-coupled receptor E3 [Source:HGNC Symbol;Acc:HGNC:23647]
86. LOC283045 5 0.771 0.771 - uncharacterized LOC283045
87. SSPO ENSG00000197558 22 0.77 - 0.770 SCO-spondin [Source:HGNC Symbol;Acc:HGNC:21998]
88. SMN2 ENSG00000205571, ENSG00000273772, ENSG00000277773 12 0.764 0.764 - survival of motor neuron 2, centromeric [Source:HGNC Symbol;Acc:HGNC:11118]
89. CCDC33 ENSG00000140481 4 0.762 0.762 - coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552]
90. OR4N2 ENSG00000176294 3 0.762 0.762 - olfactory receptor family 4 subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:14742]
91. CYP4F2 ENSG00000186115 6 0.745 0.745 - cytochrome P450 family 4 subfamily F member 2 [Source:HGNC Symbol;Acc:HGNC:2645]
92. IRF4 ENSG00000137265 8 0.74 0.740 - interferon regulatory factor 4 [Source:HGNC Symbol;Acc:HGNC:6119]
93. LOC101929239 LOC101929239 5 0.74 0.740 -
94. TMPRSS11E ENSG00000087128, ENSG00000274058 3 0.74 0.740 - transmembrane serine protease 11E [Source:HGNC Symbol;Acc:HGNC:24465]
95. BTBD8 ENSG00000189195 8 0.739 - 0.739 BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:21019]
96. DRICH1 ENSG00000189269 22 0.736 0.736 - aspartate rich 1 [Source:HGNC Symbol;Acc:HGNC:28031]
97. LMOD3 ENSG00000163380 51 0.736 0.736 - leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
98. PRO1804 ENSG00000278873 7 0.736 0.736 - uncharacterized LOC100133319 [Source:NCBI gene;Acc:100133319]
99. FLJ30679 ENSG00000280278 3 0.736 0.736 - uncharacterized protein FLJ30679 [Source:NCBI gene;Acc:146512]
100. KBTBD13 ENSG00000234438 9 0.722 0.722 - kelch repeat and BTB domain containing 13 [Source:HGNC Symbol;Acc:HGNC:37227]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA