Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00882

Gene Name Gene ID Reads Annotation
LINC00882 ENSG00000242759 14 long intergenic non-protein coding RNA 882 [Source:HGNC Symbol;Acc:HGNC:48568]



Genes with expression patterns similar to LINC00882

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00882 ENSG00000242759 14 2 1.000 1.000 long intergenic non-protein coding RNA 882 [Source:HGNC Symbol;Acc:HGNC:48568]
2. CST2 ENSG00000170369 2 0.941 - 0.941 cystatin SA [Source:HGNC Symbol;Acc:HGNC:2474]
3. SNORD17 ENSG00000212232 5 0.907 0.907 - small nucleolar RNA, C/D box 17 [Source:HGNC Symbol;Acc:HGNC:32713]
4. CCDC144A ENSG00000170160 18 0.907 0.907 - coiled-coil domain containing 144A [Source:HGNC Symbol;Acc:HGNC:29072]
5. TECRL ENSG00000205678 122 0.907 0.907 - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
6. CACNA1S ENSG00000081248 9 0.907 0.907 - calcium voltage-gated channel subunit alpha1 S [Source:HGNC Symbol;Acc:HGNC:1397]
7. LINC01097 ENSG00000281202 11 0.907 0.907 - long intergenic non-protein coding RNA 1097 [Source:HGNC Symbol;Acc:HGNC:27738]
8. HORMAD1 ENSG00000143452 3 0.907 0.907 - HORMA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25245]
9. TM4SF19-AS1 ENSG00000235897 5 0.907 0.907 - TM4SF19 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41085]
10. CEACAM6 ENSG00000086548 9 0.907 0.907 - carcinoembryonic antigen related cell adhesion molecule 6 [Source:HGNC Symbol;Acc:HGNC:1818]
11. LOC101928896 7 0.907 0.907 - uncharacterized LOC101928896
12. LHFPL3-AS1 ENSG00000226869 5 0.907 0.907 - LHFPL3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40341]
13. CCDC144NL ENSG00000205212 6 0.907 0.907 - coiled-coil domain containing 144 family, N-terminal like [Source:HGNC Symbol;Acc:HGNC:33735]
14. CSRP3 ENSG00000129170 6 0.907 0.907 - cysteine and glycine rich protein 3 [Source:HGNC Symbol;Acc:HGNC:2472]
15. GPC5-AS1 ENSG00000235984 9 0.907 0.907 - GPC5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39886]
16. PARP15 ENSG00000173200 5 0.907 0.907 - poly(ADP-ribose) polymerase family member 15 [Source:HGNC Symbol;Acc:HGNC:26876]
17. LOC101929064 3 0.907 0.907 - uncharacterized LOC101929064
18. DEFB127 ENSG00000088782 12 0.897 - 0.897 defensin beta 127 [Source:HGNC Symbol;Acc:HGNC:16206]
19. FAM180A ENSG00000189320 1 0.897 - 0.897 family with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
20. CEMP1 ENSG00000205923 1 0.897 - 0.897 cementum protein 1 [Source:HGNC Symbol;Acc:HGNC:32553]
21. LOC101929420 7 0.895 - 0.895 uncharacterized LOC101929420
22. LOC101927229 16 0.889 0.889 - uncharacterized LOC101927229
23. SLC14A2-AS1 ENSG00000267097, ENSG00000285384 16 0.887 - 0.887 SLC14A2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51125]
24. PROSER2-AS1 ENSG00000225778 35 0.872 0.872 - PROSER2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27343]
25. GALNT8 ENSG00000130035 5 0.855 - 0.855 polypeptide N-acetylgalactosaminyltransferase 8 [Source:HGNC Symbol;Acc:HGNC:4130]
26. TCEAL6 ENSG00000204071 17 0.85 - 0.850 transcription elongation factor A like 6 [Source:HGNC Symbol;Acc:HGNC:24553]
27. MUC16 ENSG00000181143 6 0.848 0.848 - mucin 16, cell surface associated [Source:HGNC Symbol;Acc:HGNC:15582]
28. ANKRD19P ENSG00000187984 6 0.848 0.848 - ankyrin repeat domain 19, pseudogene [Source:HGNC Symbol;Acc:HGNC:22567]
29. SNORA5A ENSG00000206838 2 0.846 - 0.846 small nucleolar RNA, H/ACA box 5A [Source:HGNC Symbol;Acc:HGNC:32588]
30. ZSCAN23 ENSG00000187987 12 0.846 0.846 - zinc finger and SCAN domain containing 23 [Source:HGNC Symbol;Acc:HGNC:21193]
31. LOC101928443 6 0.843 0.843 - uncharacterized LOC101928443, transcript variant 2
32. FOXE1 ENSG00000178919 8 0.843 0.843 - forkhead box E1 [Source:HGNC Symbol;Acc:HGNC:3806]
33. LOC101929608 9 0.831 - 0.831 uncharacterized LOC101929608
34. ZNF80 ENSG00000174255 6 0.83 0.830 - zinc finger protein 80 [Source:HGNC Symbol;Acc:HGNC:13155]
35. H2BFWT ENSG00000123569 6 0.83 - 0.830 H2B histone family member W, testis specific [Source:HGNC Symbol;Acc:HGNC:27252]
36. KCNQ5-IT1 ENSG00000233844 16 0.83 0.830 - KCNQ5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41354]
37. LOC100507639 6 0.822 - 0.822 uncharacterized LOC100507639
38. CASC9 ENSG00000249395 4 0.815 - 0.815 cancer susceptibility 9 [Source:HGNC Symbol;Acc:HGNC:48906]
39. MMD2 ENSG00000136297 5 0.814 0.814 - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
40. SLC31A2 ENSG00000136867 58 0.811 0.811 - solute carrier family 31 member 2 [Source:HGNC Symbol;Acc:HGNC:11017]
41. LOC100652758 22 0.794 - 0.794 uncharacterized LOC100652758, transcript variant 2
42. LINC01180 ENSG00000266979 2 0.782 - 0.782 long intergenic non-protein coding RNA 1180 [Source:HGNC Symbol;Acc:HGNC:49558]
43. OR7C1 ENSG00000127530 9 0.778 - 0.778 olfactory receptor family 7 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8373]
44. LENG8 ENSG00000167615, ENSG00000274305, ENSG00000276458, ENSG00000276681 20 0.77 - 0.770 leukocyte receptor cluster member 8 [Source:HGNC Symbol;Acc:HGNC:15500]
45. CHRNB3 ENSG00000147432 13 0.769 0.769 - cholinergic receptor nicotinic beta 3 subunit [Source:HGNC Symbol;Acc:HGNC:1963]
46. MPP4 ENSG00000082126 24 0.763 0.763 - membrane palmitoylated protein 4 [Source:HGNC Symbol;Acc:HGNC:13680]
47. GPR87 ENSG00000138271 5 0.76 - 0.760 G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
48. C1orf234 11 0.755 0.755 - chromosome 1 open reading frame 234
49. PKP1 ENSG00000081277 8 0.748 0.748 - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
50. PVRL3-AS1 7 0.724 - 0.724 PVRL3 antisense RNA 1
51. LOC101928030 6 0.723 0.723 - uncharacterized LOC101928030
52. KCNJ6 ENSG00000157542 71 0.723 0.723 - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
53. ECM2 ENSG00000106823 6 0.717 0.717 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
54. MYCBP ENSG00000214114 5 0.714 - 0.714 MYC binding protein [Source:HGNC Symbol;Acc:HGNC:7554]
55. HSPA7 ENSG00000225217 7 0.711 0.711 - heat shock protein family A (Hsp70) member 7 [Source:HGNC Symbol;Acc:HGNC:5240]
56. DLGAP1-AS4 ENSG00000263878 8 0.707 0.707 - DLGAP1 antisense RNA 4 [Source:HGNC Symbol;Acc:HGNC:44333]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA