Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00871

Gene Name Gene ID Reads Annotation
LINC00871 ENSG00000258700 14 long intergenic non-protein coding RNA 871 [Source:HGNC Symbol;Acc:HGNC:47038]



Genes with expression patterns similar to LINC00871

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00871 ENSG00000258700 14 2 1.000 1.000 long intergenic non-protein coding RNA 871 [Source:HGNC Symbol;Acc:HGNC:47038]
2. DNASE2B ENSG00000137976 4 0.964 - 0.964 deoxyribonuclease 2 beta [Source:HGNC Symbol;Acc:HGNC:28875]
3. ANKRD34C ENSG00000235711 10 0.964 - 0.964 ankyrin repeat domain 34C [Source:HGNC Symbol;Acc:HGNC:33888]
4. NPIPA8 ENSG00000214940 1 0.964 - 0.964 nuclear pore complex interacting protein family member A8 [Source:HGNC Symbol;Acc:HGNC:41983]
5. LINC00640 ENSG00000258479 2 0.964 - 0.964 long intergenic non-protein coding RNA 640 [Source:HGNC Symbol;Acc:HGNC:44291]
6. LINC01396 ENSG00000273396 3 0.962 - 0.962 long intergenic non-protein coding RNA 1396 [Source:HGNC Symbol;Acc:HGNC:50675]
7. CD177 ENSG00000204936 5 0.96 - 0.960 CD177 molecule [Source:HGNC Symbol;Acc:HGNC:30072]
8. CLEC12A ENSG00000172322 4 0.951 - 0.951 C-type lectin domain family 12 member A [Source:HGNC Symbol;Acc:HGNC:31713]
9. HSF4 ENSG00000102878 20 0.948 - 0.948 heat shock transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:5227]
10. CFHR4 ENSG00000134365 5 0.946 - 0.946 complement factor H related 4 [Source:HGNC Symbol;Acc:HGNC:16979]
11. CCDC144NL ENSG00000205212 6 0.945 - 0.945 coiled-coil domain containing 144 family, N-terminal like [Source:HGNC Symbol;Acc:HGNC:33735]
12. PRKX-AS1 ENSG00000236188 6 0.944 - 0.944 PRKX antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40479]
13. TACR3 ENSG00000169836 3 0.933 - 0.933 tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]
14. EPO ENSG00000130427 14 0.906 - 0.906 erythropoietin [Source:HGNC Symbol;Acc:HGNC:3415]
15. SLC9C2 ENSG00000162753 4 0.906 - 0.906 solute carrier family 9 member C2 (putative) [Source:HGNC Symbol;Acc:HGNC:28664]
16. HIST1H3A ENSG00000275714 26 0.872 - 0.872 histone cluster 1 H3 family member a [Source:HGNC Symbol;Acc:HGNC:4766]
17. ZNF648 ENSG00000179930 6 0.871 0.871 - zinc finger protein 648 [Source:HGNC Symbol;Acc:HGNC:18190]
18. SHCBP1L ENSG00000157060 13 0.871 0.871 - SHC binding and spindle associated 1 like [Source:HGNC Symbol;Acc:HGNC:16788]
19. LINC00624 ENSG00000278811 6 0.871 0.871 - long intergenic non-protein coding RNA 624 [Source:HGNC Symbol;Acc:HGNC:44254]
20. DNAH17 ENSG00000187775 4 0.871 0.871 - dynein axonemal heavy chain 17 [Source:HGNC Symbol;Acc:HGNC:2946]
21. ERICH6B ENSG00000165837 6 0.871 0.871 - glutamate rich 6B [Source:HGNC Symbol;Acc:HGNC:26523]
22. LRRC72 ENSG00000205858 3 0.871 0.871 - leucine rich repeat containing 72 [Source:HGNC Symbol;Acc:HGNC:42972]
23. SFRP5 ENSG00000120057 116 0.871 0.871 - secreted frizzled related protein 5 [Source:HGNC Symbol;Acc:HGNC:10779]
24. CD69 ENSG00000110848 3 0.871 0.871 - CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]
25. LOC104968399 7 0.871 0.871 - uncharacterized LOC104968399, transcript variant 3
26. A2MP1 ENSG00000256069 6 0.871 0.871 - alpha-2-macroglobulin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:8]
27. CCL25 ENSG00000131142 11 0.871 0.871 - C-C motif chemokine ligand 25 [Source:HGNC Symbol;Acc:HGNC:10624]
28. ATP6V1B1-AS1 ENSG00000239322 8 0.871 0.871 - ATP6V1B1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51118]
29. DQX1 ENSG00000144045 8 0.871 0.871 - DEAQ-box RNA dependent ATPase 1 [Source:HGNC Symbol;Acc:HGNC:20410]
30. SCN10A ENSG00000185313 1 0.862 - 0.862 sodium voltage-gated channel alpha subunit 10 [Source:HGNC Symbol;Acc:HGNC:10582]
31. ZNF663P ENSG00000215452 55 0.842 0.842 - zinc finger protein 663, pseudogene [Source:HGNC Symbol;Acc:HGNC:25342]
32. CTSLP2 ENSG00000266217, ENSG00000280913 6 0.813 0.813 - cathepsin L pseudogene 2 [Source:NCBI gene;Acc:1517]
33. VTRNA1-3 ENSG00000202515 2 0.811 - 0.811 vault RNA 1-3 [Source:HGNC Symbol;Acc:HGNC:12656]
34. GPBAR1 ENSG00000179921 28 0.809 - 0.809 G protein-coupled bile acid receptor 1 [Source:HGNC Symbol;Acc:HGNC:19680]
35. MS4A14 ENSG00000166928 13 0.804 - 0.804 membrane spanning 4-domains A14 [Source:HGNC Symbol;Acc:HGNC:30706]
36. CXCL17 ENSG00000189377 11 0.795 0.795 - C-X-C motif chemokine ligand 17 [Source:HGNC Symbol;Acc:HGNC:19232]
37. BTLA ENSG00000186265 8 0.794 - 0.794 B and T lymphocyte associated [Source:HGNC Symbol;Acc:HGNC:21087]
38. NCF1B ENSG00000182487 8 0.793 0.793 - neutrophil cytosolic factor 1B pseudogene [Source:HGNC Symbol;Acc:HGNC:32522]
39. LTA ENSG00000173503, ENSG00000223919, ENSG00000226275, ENSG00000226979, ENSG00000230279, ENSG00000231408, ENSG00000238130 8 0.789 0.789 - lymphotoxin alpha [Source:HGNC Symbol;Acc:HGNC:6709]
40. NFKBID ENSG00000167604 19 0.785 0.785 - NFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]
41. PROK2 ENSG00000163421 2 0.78 - 0.780 prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
42. INHA ENSG00000123999 22 0.78 - 0.780 inhibin subunit alpha [Source:HGNC Symbol;Acc:HGNC:6065]
43. KRTDAP ENSG00000188508 13 0.779 0.779 - keratinocyte differentiation associated protein [Source:HGNC Symbol;Acc:HGNC:16313]
44. LOC101929268 10 0.779 0.779 - uncharacterized LOC101929268
45. LOC102723828 2 0.771 - 0.771 uncharacterized LOC102723828
46. MOV10L1 ENSG00000073146 9 0.768 - 0.768 Mov10 like RISC complex RNA helicase 1 [Source:HGNC Symbol;Acc:HGNC:7201]
47. PCDHGC3 ENSG00000240184 7 0.766 - 0.766 protocadherin gamma subfamily C, 3 [Source:HGNC Symbol;Acc:HGNC:8716]
48. FAM171A2 ENSG00000161682 2 0.764 - 0.764 family with sequence similarity 171 member A2 [Source:HGNC Symbol;Acc:HGNC:30480]
49. FLJ42969 ENSG00000248599 6 0.757 0.757 - uncharacterized LOC441374 [Source:NCBI gene;Acc:441374]
50. LOC101928994 10 0.757 0.757 - uncharacterized LOC101928994
51. LOC100506368 8 0.755 - 0.755 uncharacterized LOC100506368
52. CTD-2201I18.1 ENSG00000249825 8 0.753 - 0.753 uncharacterized LOC101929215 [Source:NCBI gene;Acc:101929215]
53. C10orf32-ASMT C10orf32-ASMT 5 0.751 - 0.751
54. SPTY2D1-AS1 25 0.749 - 0.749 SPTY2D1 antisense RNA 1
55. CXCL3 ENSG00000163734 39 0.745 0.745 - C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]
56. SH2D3A ENSG00000125731 7 0.744 - 0.744 SH2 domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16885]
57. NALCN ENSG00000102452 29 0.733 0.733 - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
58. ETV3L ENSG00000253831 14 0.732 0.732 - ETS variant 3 like [Source:HGNC Symbol;Acc:HGNC:33834]
59. TMPRSS11B ENSG00000185873 5 0.732 0.732 - transmembrane serine protease 11B [Source:HGNC Symbol;Acc:HGNC:25398]
60. SSPO ENSG00000197558 22 0.731 - 0.731 SCO-spondin [Source:HGNC Symbol;Acc:HGNC:21998]
61. SNORA10 ENSG00000206811 8 0.73 0.730 - small nucleolar RNA, H/ACA box 10 [Source:HGNC Symbol;Acc:HGNC:32598]
62. MAP3K10 ENSG00000130758 7 0.719 - 0.719 mitogen-activated protein kinase kinase kinase 10 [Source:HGNC Symbol;Acc:HGNC:6849]
63. IL32 ENSG00000008517 190 0.716 0.716 - interleukin 32 [Source:HGNC Symbol;Acc:HGNC:16830]
64. MTHFD2P1 ENSG00000244681 51 0.712 0.712 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48859]
65. LOC101927438 9 0.708 0.708 - uncharacterized LOC101927438
66. BTBD8 ENSG00000189195 8 0.708 - 0.708 BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:21019]
67. CCR10 ENSG00000184451 9 0.701 0.701 - C-C motif chemokine receptor 10 [Source:HGNC Symbol;Acc:HGNC:4474]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA