Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00642

Gene Name Gene ID Reads Annotation
LINC00642 ENSG00000233208 16 long intergenic non-protein coding RNA 642 [Source:HGNC Symbol;Acc:HGNC:44293]



Genes with expression patterns similar to LINC00642

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00642 ENSG00000233208 16 2 1.000 1.000 long intergenic non-protein coding RNA 642 [Source:HGNC Symbol;Acc:HGNC:44293]
2. NODAL ENSG00000156574 3 0.939 - 0.939 nodal growth differentiation factor [Source:HGNC Symbol;Acc:HGNC:7865]
3. PRG2 ENSG00000186652 99 0.916 - 0.916 proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362]
4. LOC101928491 2 0.908 - 0.908 uncharacterized LOC101928491
5. LOC285593 2 0.908 - 0.908 uncharacterized LOC285593, transcript variant 2
6. LINC00901 ENSG00000242385 2 0.908 - 0.908 long intergenic non-protein coding RNA 901 [Source:HGNC Symbol;Acc:HGNC:40352]
7. ARHGEF38-IT1 ENSG00000249885 2 0.908 - 0.908 ARHGEF38 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41483]
8. ELFN1-AS1 ENSG00000236081 4 0.908 - 0.908 ELFN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39071]
9. EPX ENSG00000121053 6 0.908 - 0.908 eosinophil peroxidase [Source:HGNC Symbol;Acc:HGNC:3423]
10. HOTTIP ENSG00000243766 6 0.908 - 0.908 HOXA distal transcript antisense RNA [Source:HGNC Symbol;Acc:HGNC:37461]
11. FOXP1-AS1 ENSG00000244203 2 0.908 - 0.908 FOXP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41942]
12. UROC1 ENSG00000159650 2 0.908 - 0.908 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
13. COL4A3 ENSG00000169031 9 0.908 - 0.908 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
14. FLJ46066 29 0.905 - 0.905 uncharacterized LOC401103
15. CLC ENSG00000105205 68 0.891 - 0.891 Charcot-Leyden crystal galectin [Source:HGNC Symbol;Acc:HGNC:2014]
16. LMNTD2 ENSG00000185522, ENSG00000275873 9 0.89 - 0.890 lamin tail domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28561]
17. RASL11A ENSG00000122035 11 0.883 - 0.883 RAS like family 11 member A [Source:HGNC Symbol;Acc:HGNC:23802]
18. IL1B ENSG00000125538 9 0.882 - 0.882 interleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]
19. LCN2 ENSG00000148346 6 0.867 - 0.867 lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526]
20. APOF ENSG00000175336 6 0.863 - 0.863 apolipoprotein F [Source:HGNC Symbol;Acc:HGNC:615]
21. MEF2C-AS1 ENSG00000248309 14 0.858 - 0.858 MEF2C antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48908]
22. CLEC4D ENSG00000166527 5 0.851 - 0.851 C-type lectin domain family 4 member D [Source:HGNC Symbol;Acc:HGNC:14554]
23. NPIPB5 ENSG00000243716, ENSG00000284218 7 0.838 - 0.838 nuclear pore complex interacting protein family member B5 [Source:HGNC Symbol;Acc:HGNC:37233]
24. PCP4L1 ENSG00000248485 11 0.825 - 0.825 Purkinje cell protein 4 like 1 [Source:HGNC Symbol;Acc:HGNC:20448]
25. SNORA22 ENSG00000206634 6 0.818 - 0.818 small nucleolar RNA, H/ACA box 22 [Source:HGNC Symbol;Acc:HGNC:32612]
26. CCDC151 ENSG00000198003 22 0.818 - 0.818 coiled-coil domain containing 151 [Source:HGNC Symbol;Acc:HGNC:28303]
27. PTGES3L-AARSD1 ENSG00000108825 5 0.816 - 0.816 PTGES3L-AARSD1 readthrough [Source:HGNC Symbol;Acc:HGNC:43946]
28. NIPAL4 ENSG00000172548 13 0.812 - 0.812 NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
29. PRTN3 ENSG00000196415, ENSG00000277804 24 0.78 - 0.780 proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]
30. MPO ENSG00000005381 179 0.774 - 0.774 myeloperoxidase [Source:HGNC Symbol;Acc:HGNC:7218]
31. CFP ENSG00000126759 47 0.769 - 0.769 complement factor properdin [Source:HGNC Symbol;Acc:HGNC:8864]
32. LOC100133669 14 0.769 - 0.769 uncharacterized LOC100133669, transcript variant X1
33. CDKN2A ENSG00000147889 7 0.764 - 0.764 cyclin dependent kinase inhibitor 2A [Source:HGNC Symbol;Acc:HGNC:1787]
34. CPA3 ENSG00000163751 6 0.759 - 0.759 carboxypeptidase A3 [Source:HGNC Symbol;Acc:HGNC:2298]
35. LOC441155 123 0.758 0.758 - zinc finger CCCH-type domain-containing-like, transcript variant X1
36. KCNJ1 ENSG00000151704 23 0.75 - 0.750 potassium voltage-gated channel subfamily J member 1 [Source:HGNC Symbol;Acc:HGNC:6255]
37. LOC79160 4 0.744 0.744 - uncharacterized LOC79160
38. LINC01353 ENSG00000231507 4 0.744 0.744 - long intergenic non-protein coding RNA 1353 [Source:HGNC Symbol;Acc:HGNC:50580]
39. LOC102503427 2 0.744 0.744 - uncharacterized LOC102503427
40. LINC01231 ENSG00000236511 12 0.744 0.744 - long intergenic non-protein coding RNA 1231 [Source:HGNC Symbol;Acc:HGNC:49688]
41. SLFN14 ENSG00000236320 2 0.744 0.744 - schlafen family member 14 [Source:HGNC Symbol;Acc:HGNC:32689]
42. RAB40A ENSG00000172476 3 0.744 0.744 - RAB40A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18283]
43. FAM83A-AS1 ENSG00000204949 5 0.744 0.744 - FAM83A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48658]
44. SNORA27 ENSG00000207051 75 0.744 0.744 - small nucleolar RNA, H/ACA box 27 [Source:HGNC Symbol;Acc:HGNC:32617]
45. ADORA2A-AS1 ENSG00000178803 3 0.744 0.744 - ADORA2A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37122]
46. FNDC9 ENSG00000172568 13 0.744 0.744 - fibronectin type III domain containing 9 [Source:HGNC Symbol;Acc:HGNC:33547]
47. IFIH1 ENSG00000115267 24 0.744 0.744 - interferon induced with helicase C domain 1 [Source:HGNC Symbol;Acc:HGNC:18873]
48. FAM201A ENSG00000204860 8 0.744 0.744 - family with sequence similarity 201 member A [Source:HGNC Symbol;Acc:HGNC:27239]
49. CA5A ENSG00000174990 17 0.744 0.744 - carbonic anhydrase 5A [Source:HGNC Symbol;Acc:HGNC:1377]
50. LOC100506142 4 0.744 0.744 - uncharacterized LOC100506142
51. FCGR1A ENSG00000150337 9 0.744 0.744 - Fc fragment of IgG receptor Ia [Source:HGNC Symbol;Acc:HGNC:3613]
52. LINC01511 ENSG00000250584, ENSG00000281736 2 0.744 0.744 - long intergenic non-protein coding RNA 1511 [Source:HGNC Symbol;Acc:HGNC:51200]
53. PCDHA2 ENSG00000204969 6 0.744 0.744 - protocadherin alpha 2 [Source:HGNC Symbol;Acc:HGNC:8668]
54. GJA8 ENSG00000121634 5 0.744 0.744 - gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]
55. GJA9-MYCBP ENSG00000274944 2 0.744 0.744 - GJA9-MYCBP readthrough [Source:NCBI gene;Acc:100527950]
56. SYN3 ENSG00000185666 27 0.742 - 0.742 synapsin III [Source:HGNC Symbol;Acc:HGNC:11496]
57. PSPN ENSG00000125650 11 0.734 - 0.734 persephin [Source:HGNC Symbol;Acc:HGNC:9579]
58. LGALS7B ENSG00000178934, ENSG00000282902 10 0.73 - 0.730 galectin 7B [Source:HGNC Symbol;Acc:HGNC:34447]
59. SSTR5-AS1 ENSG00000261713 7 0.727 - 0.727 SSTR5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26502]
60. CARD9 ENSG00000187796 45 0.726 - 0.726 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
61. YBX3P1 ENSG00000261614 39 0.725 - 0.725 Y-box binding protein 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2429]
62. CYP4F35P ENSG00000265787 27 0.716 - 0.716 cytochrome P450 family 4 subfamily F member 35, pseudogene [Source:HGNC Symbol;Acc:HGNC:39954]
63. PCDHA10 ENSG00000250120 7 0.714 - 0.714 protocadherin alpha 10 [Source:HGNC Symbol;Acc:HGNC:8664]
64. SIGLEC8 ENSG00000105366 7 0.705 - 0.705 sialic acid binding Ig like lectin 8 [Source:HGNC Symbol;Acc:HGNC:10877]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA