Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00535

Gene Name Gene ID Reads Annotation
LINC00535 ENSG00000246662 12 long intergenic non-protein coding RNA 535 [Source:HGNC Symbol;Acc:HGNC:43644]



Genes with expression patterns similar to LINC00535

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00535 ENSG00000246662 12 2 1.000 1.000 long intergenic non-protein coding RNA 535 [Source:HGNC Symbol;Acc:HGNC:43644]
2. C2orf73 ENSG00000177994 30 0.839 - 0.839 chromosome 2 open reading frame 73 [Source:HGNC Symbol;Acc:HGNC:26861]
3. HIGD2B ENSG00000175202 3 0.824 0.824 - HIG1 hypoxia inducible domain family member 2B [Source:HGNC Symbol;Acc:HGNC:26984]
4. LURAP1L-AS1 ENSG00000235448 3 0.824 0.824 - LURAP1L antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49761]
5. STATH ENSG00000126549, ENSG00000282891 2 0.824 0.824 - statherin [Source:HGNC Symbol;Acc:HGNC:11369]
6. PRM1 ENSG00000175646 4 0.824 0.824 - protamine 1 [Source:HGNC Symbol;Acc:HGNC:9447]
7. C20orf24 17 0.824 0.824 - chromosome 20 open reading frame 24, transcript variant 3
8. LOC100506071 5 0.824 0.824 - uncharacterized LOC100506071
9. SERF1B ENSG00000205572, ENSG00000277429, ENSG00000278839 3 0.824 0.824 - small EDRK-rich factor 1B [Source:HGNC Symbol;Acc:HGNC:10756]
10. C2-AS1 ENSG00000281756 6 0.824 0.824 - C2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49464]
11. LOC101927797 LOC101927797 8 0.824 0.824 -
12. OR6C68 ENSG00000205327 3 0.824 0.824 - olfactory receptor family 6 subfamily C member 68 [Source:HGNC Symbol;Acc:HGNC:31297]
13. RBPJL ENSG00000124232 19 0.824 0.824 - recombination signal binding protein for immunoglobulin kappa J region like [Source:HGNC Symbol;Acc:HGNC:13761]
14. OR2A1-AS1 ENSG00000244479 2 0.824 0.824 - OR2A1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49168]
15. SLC17A4 ENSG00000146039 59 0.824 0.824 - solute carrier family 17 member 4 [Source:HGNC Symbol;Acc:HGNC:10932]
16. LINC01121 ENSG00000205054 2 0.824 0.824 - long intergenic non-protein coding RNA 1121 [Source:HGNC Symbol;Acc:HGNC:49266]
17. SENP3-EIF4A1 ENSG00000277957 7 0.824 0.824 - SENP3-EIF4A1 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49182]
18. TRIM53AP ENSG00000225581 4 0.824 0.824 - tripartite motif containing 53A, pseudogene [Source:HGNC Symbol;Acc:HGNC:19025]
19. SOWAHD ENSG00000187808 8 0.824 0.824 - sosondowah ankyrin repeat domain family member D [Source:HGNC Symbol;Acc:HGNC:32960]
20. GRP ENSG00000134443 111 0.824 0.824 - gastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]
21. LOC102467226 2 0.824 0.824 - uncharacterized LOC102467226
22. CD300A ENSG00000167851 21 0.818 - 0.818 CD300a molecule [Source:HGNC Symbol;Acc:HGNC:19319]
23. IL36RN ENSG00000136695 5 0.809 - 0.809 interleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]
24. FOXE1 ENSG00000178919 8 0.794 - 0.794 forkhead box E1 [Source:HGNC Symbol;Acc:HGNC:3806]
25. IL17F ENSG00000112116 3 0.794 - 0.794 interleukin 17F [Source:HGNC Symbol;Acc:HGNC:16404]
26. CES1P1 ENSG00000228695, ENSG00000281948 17 0.79 - 0.790 carboxylesterase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:18546]
27. OTX2 ENSG00000165588 4 0.79 - 0.790 orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8522]
28. LOC101928035 9 0.79 - 0.790 uncharacterized LOC101928035
29. TTTY10 ENSG00000229236 4 0.789 - 0.789 testis-specific transcript, Y-linked 10 [Source:HGNC Symbol;Acc:HGNC:18491]
30. BLID ENSG00000259571 4 0.789 - 0.789 BH3-like motif containing, cell death inducer [Source:HGNC Symbol;Acc:HGNC:33495]
31. IL23R ENSG00000162594 45 0.786 - 0.786 interleukin 23 receptor [Source:HGNC Symbol;Acc:HGNC:19100]
32. FXYD6-FXYD2 ENSG00000255245 4 0.784 - 0.784 FXYD6-FXYD2 readthrough [Source:HGNC Symbol;Acc:HGNC:39978]
33. C10orf55 ENSG00000222047 15 0.78 - 0.780 chromosome 10 open reading frame 55 [Source:HGNC Symbol;Acc:HGNC:31008]
34. HOXD11 ENSG00000128713 5 0.777 - 0.777 homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]
35. HIST2H3D ENSG00000183598 14 0.775 0.775 - histone cluster 2 H3 family member d [Source:HGNC Symbol;Acc:HGNC:25311]
36. C11orf21 ENSG00000110665 8 0.774 - 0.774 chromosome 11 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:13231]
37. DPPA5 ENSG00000203909 8 0.772 - 0.772 developmental pluripotency associated 5 [Source:HGNC Symbol;Acc:HGNC:19201]
38. CLEC4E ENSG00000166523 5 0.767 - 0.767 C-type lectin domain family 4 member E [Source:HGNC Symbol;Acc:HGNC:14555]
39. CRISP1 ENSG00000124812 9 0.766 - 0.766 cysteine rich secretory protein 1 [Source:HGNC Symbol;Acc:HGNC:304]
40. CLCNKB ENSG00000184908 10 0.76 - 0.760 chloride voltage-gated channel Kb [Source:HGNC Symbol;Acc:HGNC:2027]
41. PSMC3IP ENSG00000131470 5 0.756 - 0.756 PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
42. BTC ENSG00000174808 5 0.754 - 0.754 betacellulin [Source:HGNC Symbol;Acc:HGNC:1121]
43. LBX2 ENSG00000179528 16 0.752 - 0.752 ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525]
44. LOC729609 16 0.752 0.752 - uncharacterized LOC729609
45. FLJ22763 16 0.752 - 0.752 uncharacterized LOC401081
46. HOXD10 ENSG00000128710 34 0.743 - 0.743 homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
47. CSN1S1 ENSG00000126545 16 0.739 - 0.739 casein alpha s1 [Source:HGNC Symbol;Acc:HGNC:2445]
48. CCL25 ENSG00000131142 11 0.739 - 0.739 C-C motif chemokine ligand 25 [Source:HGNC Symbol;Acc:HGNC:10624]
49. LINC01477 ENSG00000261715 7 0.738 0.738 - long intergenic non-protein coding RNA 1477 [Source:HGNC Symbol;Acc:HGNC:51119]
50. ACTL10 ENSG00000182584 17 0.735 - 0.735 actin like 10 [Source:HGNC Symbol;Acc:HGNC:16127]
51. SNORA44 ENSG00000273544 7 0.728 0.728 - small nucleolar RNA, H/ACA box 44 [Source:HGNC Symbol;Acc:HGNC:32637]
52. LINC01314 55 0.728 - 0.728 long intergenic non-protein coding RNA 1314
53. HCG4B ENSG00000220391, ENSG00000226563, ENSG00000227262, ENSG00000227956, ENSG00000231287, ENSG00000231941, ENSG00000236033 19 0.724 0.724 - HLA complex group 4B [Source:HGNC Symbol;Acc:HGNC:22919]
54. APOBEC3B ENSG00000179750 10 0.722 - 0.722 apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]
55. C6orf222 ENSG00000189325 6 0.721 - 0.721 chromosome 6 open reading frame 222 [Source:HGNC Symbol;Acc:HGNC:33769]
56. LINC01137 ENSG00000233621 17 0.721 - 0.721 long intergenic non-protein coding RNA 1137 [Source:HGNC Symbol;Acc:HGNC:49453]
57. KIF25-AS1 ENSG00000229921 3 0.718 0.718 - KIF25 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:20953]
58. COL19A1 ENSG00000082293 18 0.717 - 0.717 collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
59. PROB1 ENSG00000228672 5 0.716 - 0.716 proline rich basic protein 1 [Source:HGNC Symbol;Acc:HGNC:41906]
60. SNRPN ENSG00000128739 33 0.715 0.715 - small nuclear ribonucleoprotein polypeptide N [Source:HGNC Symbol;Acc:HGNC:11164]
61. CCR5 ENSG00000160791 7 0.71 0.710 - C-C motif chemokine receptor 5 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:1606]
62. KLK5 ENSG00000167754 17 0.709 - 0.709 kallikrein related peptidase 5 [Source:HGNC Symbol;Acc:HGNC:6366]
63. C19orf84 ENSG00000262874 39 0.701 - 0.701 chromosome 19 open reading frame 84 [Source:HGNC Symbol;Acc:HGNC:27112]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA