Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00504

Gene Name Gene ID Reads Annotation
LINC00504 ENSG00000248360 23549 long intergenic non-protein coding RNA 504 [Source:HGNC Symbol;Acc:HGNC:43555]



Genes with expression patterns similar to LINC00504

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00504 ENSG00000248360 23549 2 1.000 1.000 long intergenic non-protein coding RNA 504 [Source:HGNC Symbol;Acc:HGNC:43555]
2. UGDH-AS1 ENSG00000249348 7480 1.891 0.917 0.974 UGDH antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40601]
3. MAB21L3 ENSG00000173212 31065 1.854 0.873 0.981 mab-21 like 3 [Source:HGNC Symbol;Acc:HGNC:26787]
4. KCNQ1OT1 ENSG00000269821 39494 1.842 0.882 0.960 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
5. LOC729348 15072 1.775 0.828 0.947 uncharacterized LOC729348
6. LOC100129434 4077 1.746 0.774 0.972 uncharacterized LOC100129434
7. LOC101926898 1999 1.584 0.727 0.857 uncharacterized LOC101926898
8. TMEM212 ENSG00000186329 2169 0.925 - 0.925 transmembrane protein 212 [Source:HGNC Symbol;Acc:HGNC:34295]
9. CA5A ENSG00000174990 17 0.9 - 0.900 carbonic anhydrase 5A [Source:HGNC Symbol;Acc:HGNC:1377]
10. LOC101928936 2749 0.896 - 0.896 uncharacterized LOC101928936
11. EOMES ENSG00000163508 149 0.893 - 0.893 eomesodermin [Source:HGNC Symbol;Acc:HGNC:3372]
12. THBS1 ENSG00000137801 1481 0.879 - 0.879 thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]
13. LOC100131257 3501 0.876 - 0.876 zinc finger protein 655 pseudogene
14. OGN ENSG00000106809 28 0.864 - 0.864 osteoglycin [Source:HGNC Symbol;Acc:HGNC:8126]
15. LOC101928118 203 0.854 - 0.854 uncharacterized LOC101928118, transcript variant 2
16. DKK1 ENSG00000107984 1295 0.85 - 0.850 dickkopf WNT signaling pathway inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:2891]
17. LINC00506 ENSG00000281392 5309 0.845 0.845 - long intergenic non-protein coding RNA 506 [Source:NCBI gene;Acc:100846978]
18. LOC101928600 70 0.833 - 0.833 uncharacterized LOC101928600
19. AQP1 ENSG00000240583 439 0.824 - 0.824 aquaporin 1 (Colton blood group) [Source:HGNC Symbol;Acc:HGNC:633]
20. LOC55338 753 0.823 - 0.823 uncharacterized LOC55338
21. LIX1 ENSG00000145721 2882 0.798 - 0.798 limb and CNS expressed 1 [Source:HGNC Symbol;Acc:HGNC:18581]
22. KCNJ3 ENSG00000162989 494 0.794 - 0.794 potassium voltage-gated channel subfamily J member 3 [Source:HGNC Symbol;Acc:HGNC:6264]
23. ABCC9 ENSG00000069431 1241 0.789 - 0.789 ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
24. ROR1-AS1 ENSG00000223949 696 0.785 - 0.785 ROR1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40508]
25. CRHBP ENSG00000145708 30 0.782 - 0.782 corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
26. LOC102724434 13 0.781 - 0.781 uncharacterized LOC102724434, transcript variant 3
27. TFAP2D ENSG00000008197 13 0.777 - 0.777 transcription factor AP-2 delta [Source:HGNC Symbol;Acc:HGNC:15581]
28. DDX11L10 ENSG00000233614 4 0.777 - 0.777 DEAD/H-box helicase 11 like 10 [Source:HGNC Symbol;Acc:HGNC:14125]
29. SLC6A2 ENSG00000103546 79 0.777 - 0.777 solute carrier family 6 member 2 [Source:HGNC Symbol;Acc:HGNC:11048]
30. FCER1A ENSG00000179639 4 0.777 - 0.777 Fc fragment of IgE receptor Ia [Source:HGNC Symbol;Acc:HGNC:3609]
31. HAVCR1P1 ENSG00000268442 4 0.777 - 0.777 hepatitis A virus cellular receptor 1 pseudogene 1 [Source:NCBI gene;Acc:100101266]
32. FLJ41941 10 0.777 - 0.777 uncharacterized LOC100192420
33. FBXO47 ENSG00000204952 5 0.777 - 0.777 F-box protein 47 [Source:HGNC Symbol;Acc:HGNC:31969]
34. F5 ENSG00000198734 273 0.777 - 0.777 coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
35. LINC00314 ENSG00000178457 17 0.776 - 0.776 long intergenic non-protein coding RNA 314 [Source:HGNC Symbol;Acc:HGNC:16622]
36. CD79A ENSG00000105369 11 0.775 - 0.775 CD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]
37. SOX30 ENSG00000039600 17 0.773 - 0.773 SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
38. AGRP ENSG00000159723 4 0.773 - 0.773 agouti related neuropeptide [Source:HGNC Symbol;Acc:HGNC:330]
39. PRR27 ENSG00000187533, ENSG00000282868 10 0.771 - 0.771 proline rich 27 [Source:HGNC Symbol;Acc:HGNC:33193]
40. ISM1 ENSG00000101230 654 0.769 - 0.769 isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
41. KRT17 ENSG00000128422 8 0.769 - 0.769 keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]
42. LINC01069 ENSG00000236133 10 0.768 - 0.768 long intergenic non-protein coding RNA 1069 [Source:HGNC Symbol;Acc:HGNC:49109]
43. TBX5-AS1 ENSG00000255399 121 0.768 - 0.768 TBX5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27402]
44. LOC101928804 4 0.767 - 0.767 uncharacterized LOC101928804, transcript variant 2
45. ITGA2B ENSG00000005961 64 0.766 - 0.766 integrin subunit alpha 2b [Source:HGNC Symbol;Acc:HGNC:6138]
46. MCM8-AS1 ENSG00000278719 4 0.766 - 0.766 MCM8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51230]
47. LOC101926889 473 0.766 - 0.766 uncharacterized LOC101926889
48. LOC728095 4 0.766 - 0.766 uncharacterized LOC728095
49. ADGRE4P ENSG00000268758 10 0.764 - 0.764 adhesion G protein-coupled receptor E4, pseudogene [Source:HGNC Symbol;Acc:HGNC:19240]
50. MUC6 ENSG00000184956, ENSG00000277281, ENSG00000277518, ENSG00000283350 25 0.763 - 0.763 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
51. ZNF471 ENSG00000196263 788 0.76 - 0.760 zinc finger protein 471 [Source:HGNC Symbol;Acc:HGNC:23226]
52. LINC01163 ENSG00000280953 16 0.759 - 0.759 long intergenic non-protein coding RNA 1163 [Source:NCBI gene;Acc:101927381]
53. ZNF663P ENSG00000215452 55 0.758 - 0.758 zinc finger protein 663, pseudogene [Source:HGNC Symbol;Acc:HGNC:25342]
54. ADH1A ENSG00000187758 4 0.757 - 0.757 alcohol dehydrogenase 1A (class I), alpha polypeptide [Source:HGNC Symbol;Acc:HGNC:249]
55. TREML3P ENSG00000184106 10 0.756 - 0.756 triggering receptor expressed on myeloid cells like 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:30806]
56. TMOD4 ENSG00000163157 10 0.756 - 0.756 tropomodulin 4 [Source:HGNC Symbol;Acc:HGNC:11874]
57. MUC5B ENSG00000117983 4 0.755 - 0.755 mucin 5B, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7516]
58. MOGAT1 ENSG00000124003 4 0.755 - 0.755 monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
59. ADD3-AS1 ENSG00000203876 38 0.754 - 0.754 ADD3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48682]
60. TREML4 ENSG00000188056 8 0.754 - 0.754 triggering receptor expressed on myeloid cells like 4 [Source:HGNC Symbol;Acc:HGNC:30807]
61. RAD51AP2 ENSG00000214842 6 0.754 - 0.754 RAD51 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:34417]
62. TECRL ENSG00000205678 122 0.754 - 0.754 trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
63. TESPA1 ENSG00000135426 8 0.753 - 0.753 thymocyte expressed, positive selection associated 1 [Source:HGNC Symbol;Acc:HGNC:29109]
64. LTK ENSG00000062524 22 0.753 - 0.753 leukocyte receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6721]
65. KRT13 ENSG00000171401 9 0.75 - 0.750 keratin 13 [Source:HGNC Symbol;Acc:HGNC:6415]
66. SLC23A3 ENSG00000213901 10 0.742 - 0.742 solute carrier family 23 member 3 [Source:HGNC Symbol;Acc:HGNC:20601]
67. LOC101927374 890 0.741 - 0.741 uncharacterized LOC101927374
68. PLS3 ENSG00000102024 7322 0.736 - 0.736 plastin 3 [Source:HGNC Symbol;Acc:HGNC:9091]
69. RGS13 ENSG00000127074 52 0.733 - 0.733 regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
70. TMEM196 ENSG00000173452 121 0.731 - 0.731 transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
71. UCMA ENSG00000165623 9 0.73 - 0.730 upper zone of growth plate and cartilage matrix associated [Source:HGNC Symbol;Acc:HGNC:25205]
72. KNG1 ENSG00000113889 64 0.729 - 0.729 kininogen 1 [Source:HGNC Symbol;Acc:HGNC:6383]
73. C9 ENSG00000113600 14 0.728 - 0.728 complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]
74. LOC643406 3347 0.724 - 0.724 uncharacterized LOC643406
75. EIF4A1 ENSG00000161960 5 0.724 - 0.724 eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]
76. TPD52L1 ENSG00000111907 3455 0.723 - 0.723 tumor protein D52 like 1 [Source:HGNC Symbol;Acc:HGNC:12006]
77. AKR1B15 ENSG00000227471 26 0.722 - 0.722 aldo-keto reductase family 1 member B15 [Source:HGNC Symbol;Acc:HGNC:37281]
78. TBX5 ENSG00000089225 1012 0.722 - 0.722 T-box 5 [Source:HGNC Symbol;Acc:HGNC:11604]
79. LOC101928137 395 0.72 - 0.720 uncharacterized LOC101928137
80. RUNX2 ENSG00000124813 177 0.719 - 0.719 runt related transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10472]
81. SLC7A11-AS1 ENSG00000250033 18 0.718 - 0.718 SLC7A11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44064]
82. DYNC1I1 ENSG00000158560 268 0.718 - 0.718 dynein cytoplasmic 1 intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:2963]
83. HRK ENSG00000135116 5 0.717 - 0.717 harakiri, BCL2 interacting protein [Source:HGNC Symbol;Acc:HGNC:5185]
84. INE1 ENSG00000224975 16 0.715 - 0.715 inactivation escape 1 [Source:HGNC Symbol;Acc:HGNC:6060]
85. LOC100505817 27 0.715 - 0.715 uncharacterized LOC100505817
86. ORM2 ENSG00000228278 7 0.714 - 0.714 orosomucoid 2 [Source:HGNC Symbol;Acc:HGNC:8499]
87. FCRL6 ENSG00000181036 25 0.713 - 0.713 Fc receptor like 6 [Source:HGNC Symbol;Acc:HGNC:31910]
88. C19orf80 C19orf80 11 0.713 - 0.713
89. MYOF ENSG00000138119 385 0.711 - 0.711 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
90. HS3ST3A1 ENSG00000153976 1402 0.71 - 0.710 heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]
91. OR1J1 ENSG00000136834 14 0.71 - 0.710 olfactory receptor family 1 subfamily J member 1 [Source:HGNC Symbol;Acc:HGNC:8208]
92. MANEA-AS1 39 0.708 - 0.708 MANEA antisense RNA 1 (head to head), transcript variant 2
93. GLTPD2 ENSG00000182327 15 0.706 - 0.706 glycolipid transfer protein domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33756]
94. CPB2 ENSG00000080618 33 0.706 - 0.706 carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]
95. LOC148696 5 0.703 - 0.703 uncharacterized LOC148696
96. SHROOM1 ENSG00000164403 1638 0.702 - 0.702 shroom family member 1 [Source:HGNC Symbol;Acc:HGNC:24084]
97. LOC101927973 18 0.702 - 0.702 uncharacterized LOC101927973
98. P2RY2 ENSG00000175591 42 0.701 - 0.701 purinergic receptor P2Y2 [Source:HGNC Symbol;Acc:HGNC:8541]
99. GDF5 ENSG00000125965 14 0.7 - 0.700 growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA