Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00408

Gene Name Gene ID Reads Annotation
LINC00408 ENSG00000226250 1 long intergenic non-protein coding RNA 408 [Source:HGNC Symbol;Acc:HGNC:42740]



Genes with expression patterns similar to LINC00408

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. MINK1 ENSG00000141503 0 1 - 1.000 misshapen like kinase 1 [Source:HGNC Symbol;Acc:HGNC:17565]
2. ATP11A-AS1 ENSG00000232684 10 1 - 1.000 ATP11A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40645]
3. IL19 ENSG00000142224 1 1 - 1.000 interleukin 19 [Source:HGNC Symbol;Acc:HGNC:5990]
4. CATSPER4 ENSG00000188782 0 1 - 1.000 cation channel sperm associated 4 [Source:HGNC Symbol;Acc:HGNC:23220]
5. LOC101927070 4 1 - 1.000 uncharacterized LOC101927070
6. LOC102724933 0 1 - 1.000 uncharacterized LOC102724933
7. VTRNA1-1 ENSG00000199990 1 1 - 1.000 vault RNA 1-1 [Source:HGNC Symbol;Acc:HGNC:12654]
8. MIR649 ENSG00000207575 0 1 - 1.000 microRNA 649 [Source:HGNC Symbol;Acc:HGNC:32905]
9. LOC100506076 2 1 - 1.000 uncharacterized LOC100506076, transcript variant 1
10. LOC101928052 2 1 - 1.000 uncharacterized LOC101928052
11. LOC101929715 0 1 - 1.000 uncharacterized LOC101929715
12. OR10H1 ENSG00000186723 0 1 - 1.000 olfactory receptor family 10 subfamily H member 1 [Source:HGNC Symbol;Acc:HGNC:8172]
13. ADAM20 ENSG00000134007 0 1 - 1.000 ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
14. KRTAP3-3 ENSG00000212899, ENSG00000263101 0 1 - 1.000 keratin associated protein 3-3 [Source:HGNC Symbol;Acc:HGNC:18890]
15. FCRL2 ENSG00000132704 0 1 - 1.000 Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]
16. LINC00408 ENSG00000226250 1 1 - 1.000 long intergenic non-protein coding RNA 408 [Source:HGNC Symbol;Acc:HGNC:42740]
17. SNCA-AS1 ENSG00000247775 0 1 - 1.000 SNCA antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50600]
18. KRTAP5-11 ENSG00000204571 1 1 - 1.000 keratin associated protein 5-11 [Source:HGNC Symbol;Acc:HGNC:23606]
19. LINC00854 2 1 - 1.000 long intergenic non-protein coding RNA 854
20. FAM83C ENSG00000125998 2 0.984 - 0.984 family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
21. MAGEB1 ENSG00000214107 1 0.98 - 0.980 MAGE family member B1 [Source:HGNC Symbol;Acc:HGNC:6808]
22. GH1 ENSG00000259384 2 0.944 - 0.944 growth hormone 1 [Source:HGNC Symbol;Acc:HGNC:4261]
23. MUC5AC ENSG00000215182, ENSG00000283158 1 0.928 - 0.928 mucin 5AC, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7515]
24. LINC01412 ENSG00000232606 1 0.925 - 0.925 long intergenic non-protein coding RNA 1412 [Source:HGNC Symbol;Acc:HGNC:50704]
25. MYBPC3 ENSG00000134571 3 0.92 - 0.920 myosin binding protein C, cardiac [Source:HGNC Symbol;Acc:HGNC:7551]
26. PP2D1 ENSG00000183977 6 0.912 - 0.912 protein phosphatase 2C like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28406]
27. LOC494141 30 0.89 - 0.890 solute carrier family 25 member 51 pseudogene, transcript variant 3
28. LINC00689 ENSG00000231419 3 0.89 - 0.890 long intergenic non-protein coding RNA 689 [Source:HGNC Symbol;Acc:HGNC:27217]
29. CASP14 ENSG00000105141 10 0.841 - 0.841 caspase 14 [Source:HGNC Symbol;Acc:HGNC:1502]
30. LOC101241902 1 0.827 - 0.827 chromosome 4 open reading frame 46 pseudogene
31. MC2R ENSG00000185231 2 0.825 - 0.825 melanocortin 2 receptor [Source:HGNC Symbol;Acc:HGNC:6930]
32. GSTA3 ENSG00000174156 1 0.816 - 0.816 glutathione S-transferase alpha 3 [Source:HGNC Symbol;Acc:HGNC:4628]
33. ASB16 ENSG00000161664 6 0.815 - 0.815 ankyrin repeat and SOCS box containing 16 [Source:HGNC Symbol;Acc:HGNC:19768]
34. PGPEP1L ENSG00000183571 14 0.797 - 0.797 pyroglutamyl-peptidase I like [Source:HGNC Symbol;Acc:HGNC:27080]
35. HAMP ENSG00000105697 9 0.782 - 0.782 hepcidin antimicrobial peptide [Source:HGNC Symbol;Acc:HGNC:15598]
36. NR5A1 ENSG00000136931 41 0.764 - 0.764 nuclear receptor subfamily 5 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7983]
37. LINC01201 ENSG00000228659 2 0.73 - 0.730 long intergenic non-protein coding RNA 1201 [Source:HGNC Symbol;Acc:HGNC:49632]
38. LOC100271832 1 0.726 - 0.726 uncharacterized LOC100271832
39. CBLN3 ENSG00000139899 123 0.715 - 0.715 cerebellin 3 precursor [Source:HGNC Symbol;Acc:HGNC:20146]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA