Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00208

Gene Name Gene ID Reads Annotation
LINC00208 ENSG00000170983 7 long intergenic non-protein coding RNA 208 [Source:HGNC Symbol;Acc:HGNC:15535]



Genes with expression patterns similar to LINC00208

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00208 ENSG00000170983 7 2 1.000 1.000 long intergenic non-protein coding RNA 208 [Source:HGNC Symbol;Acc:HGNC:15535]
2. LOC102477328 2 1 1.000 - uncharacterized LOC102477328
3. KRT16 ENSG00000186832 4 1 1.000 - keratin 16 [Source:HGNC Symbol;Acc:HGNC:6423]
4. SEMG2 ENSG00000124157 2 1 1.000 - semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]
5. PAXIP1-AS2 ENSG00000214106 9 1 1.000 - PAXIP1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:48958]
6. LOC574538 2 1 1.000 - uncharacterized LOC574538
7. PRF1 ENSG00000180644 5 1 1.000 - perforin 1 [Source:HGNC Symbol;Acc:HGNC:9360]
8. LOC101927577 5 1 1.000 - uncharacterized LOC101927577, transcript variant 2
9. FLJ37035 ENSG00000224023 8 1 1.000 - uncharacterized LOC399821 [Source:NCBI gene;Acc:399821]
10. LOC642943 4 1 1.000 - SPATA31 subfamily A pseudogene
11. LOC400863 LOC400863 3 1 1.000 -
12. SPO11 ENSG00000054796 2 1 1.000 - SPO11, initiator of meiotic double stranded breaks [Source:HGNC Symbol;Acc:HGNC:11250]
13. LOC388692 2 1 1.000 - uncharacterized LOC388692
14. MROH2B ENSG00000171495 2 1 1.000 - maestro heat like repeat family member 2B [Source:HGNC Symbol;Acc:HGNC:26857]
15. POF1B ENSG00000124429 4 1 1.000 - POF1B, actin binding protein [Source:HGNC Symbol;Acc:HGNC:13711]
16. LRCH3 ENSG00000186001 16 1 1.000 - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
17. GPR22 ENSG00000172209, ENSG00000283812 4 1 1.000 - G protein-coupled receptor 22 [Source:HGNC Symbol;Acc:HGNC:4477]
18. SPEF1 ENSG00000101222 8 1 1.000 - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
19. CLEC4F ENSG00000152672 2 1 1.000 - C-type lectin domain family 4 member F [Source:HGNC Symbol;Acc:HGNC:25357]
20. TET2-AS1 ENSG00000251586 2 1 1.000 - TET2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41125]
21. GBP3 ENSG00000117226 4 1 1.000 - guanylate binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4184]
22. DAZL ENSG00000092345 3 1 1.000 - deleted in azoospermia like [Source:HGNC Symbol;Acc:HGNC:2685]
23. HYALP1 2 1 1.000 - hyaluronoglucosaminidase pseudogene 1
24. PRKAR2A-AS1 ENSG00000224424 8 1 1.000 - PRKAR2A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40471]
25. FER1L6-AS2 ENSG00000253868 2 1 1.000 - FER1L6 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:26534]
26. CAPNS2 ENSG00000256812 2 1 1.000 - calpain small subunit 2 [Source:HGNC Symbol;Acc:HGNC:16371]
27. LINC01566 ENSG00000259841 2 1 1.000 - long intergenic non-protein coding RNA 1566 [Source:HGNC Symbol;Acc:HGNC:27555]
28. NKG7 ENSG00000105374 6 1 1.000 - natural killer cell granule protein 7 [Source:HGNC Symbol;Acc:HGNC:7830]
29. MARK2P9 ENSG00000232709 2 1 1.000 - microtubule affinity regulating kinase 2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:39800]
30. C17orf64 ENSG00000141371 3 1 1.000 - chromosome 17 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:26990]
31. CYP3A7-CYP3A51P ENSG00000282301 5 1 1.000 - CYP3A7-CYP3A51P readthrough [Source:HGNC Symbol;Acc:HGNC:51504]
32. SIGLEC8 ENSG00000105366 7 1 1.000 - sialic acid binding Ig like lectin 8 [Source:HGNC Symbol;Acc:HGNC:10877]
33. LOC389602 6 1 1.000 - uncharacterized LOC389602, transcript variant X1
34. POM121L2 ENSG00000158553 3 1 1.000 - POM121 transmembrane nucleoporin like 2 [Source:HGNC Symbol;Acc:HGNC:13973]
35. C15orf54 ENSG00000175746 2 1 1.000 - chromosome 15 open reading frame 54 (putative) [Source:HGNC Symbol;Acc:HGNC:33797]
36. MEIKIN ENSG00000239642 6 1 1.000 - meiotic kinetochore factor [Source:HGNC Symbol;Acc:HGNC:51253]
37. MRGPRD ENSG00000172938 2 1 1.000 - MAS related GPR family member D [Source:HGNC Symbol;Acc:HGNC:29626]
38. NOXO1 ENSG00000196408 2 1 1.000 - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
39. CCDC183 ENSG00000213213 10 1 1.000 - coiled-coil domain containing 183 [Source:HGNC Symbol;Acc:HGNC:28236]
40. GOLGA6L2 ENSG00000174450 3 1 1.000 - golgin A6 family-like 2 [Source:HGNC Symbol;Acc:HGNC:26695]
41. IL36RN ENSG00000136695 5 1 1.000 - interleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]
42. TMEM174 ENSG00000164325 2 1 1.000 - transmembrane protein 174 [Source:HGNC Symbol;Acc:HGNC:28187]
43. LINC01168 ENSG00000240707 1 0.956 - 0.956 long intergenic non-protein coding RNA 1168 [Source:HGNC Symbol;Acc:HGNC:49537]
44. PRSS38 ENSG00000185888 1 0.956 - 0.956 serine protease 38 [Source:HGNC Symbol;Acc:HGNC:29625]
45. LOC100505811 LOC100505811 1 0.956 - 0.956
46. SNORD11B ENSG00000271852 1 0.956 - 0.956 small nucleolar RNA, C/D box 11B [Source:HGNC Symbol;Acc:HGNC:33571]
47. FAM72C ENSG00000263513 1 0.956 - 0.956 family with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]
48. ATP6V0CP3 ENSG00000213435 1 0.956 - 0.956 ATPase H+ transporting V0 subunit c pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:40001]
49. VENTXP1 ENSG00000259849 1 0.956 - 0.956 VENT homeobox pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:30900]
50. KRTAP5-2 ENSG00000205867, ENSG00000278489, ENSG00000281533 2 0.956 - 0.956 keratin associated protein 5-2 [Source:HGNC Symbol;Acc:HGNC:23597]
51. OPA1-AS1 ENSG00000224855 1 0.956 - 0.956 OPA1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40421]
52. LINC00410 ENSG00000231674 1 0.956 - 0.956 long intergenic non-protein coding RNA 410 [Source:HGNC Symbol;Acc:HGNC:42742]
53. MTOR-AS1 ENSG00000225602 1 0.956 - 0.956 MTOR antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40242]
54. RGPD4-AS1 ENSG00000230651 1 0.956 - 0.956 RGPD4 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:49273]
55. EQTN ENSG00000120160 5 0.956 - 0.956 equatorin [Source:HGNC Symbol;Acc:HGNC:1359]
56. CLDN20 ENSG00000171217 1 0.956 - 0.956 claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
57. LINC01432 ENSG00000234435 1 0.956 - 0.956 long intergenic non-protein coding RNA 1432 [Source:HGNC Symbol;Acc:HGNC:50745]
58. LOC101927926 3 0.956 - 0.956 uncharacterized LOC101927926
59. LINC01197 ENSG00000248441 9 0.95 0.950 - long intergenic non-protein coding RNA 1197 [Source:HGNC Symbol;Acc:HGNC:49597]
60. FOLH1B ENSG00000134612 2 0.949 - 0.949 folate hydrolase 1B [Source:HGNC Symbol;Acc:HGNC:13636]
61. TSPEAR-AS2 ENSG00000182912 1 0.948 - 0.948 TSPEAR antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:16428]
62. ESX1 ENSG00000123576 4 0.947 - 0.947 ESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:14865]
63. HOTAIR ENSG00000228630 10 0.945 - 0.945 HOX transcript antisense RNA [Source:HGNC Symbol;Acc:HGNC:33510]
64. ANKRD26P3 ENSG00000237636 2 0.942 - 0.942 ankyrin repeat domain 26 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39689]
65. PLA2G5 ENSG00000127472 2 0.928 - 0.928 phospholipase A2 group V [Source:HGNC Symbol;Acc:HGNC:9038]
66. MUC13 ENSG00000173702 5 0.918 0.918 - mucin 13, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7511]
67. LINC00359 3 0.913 - 0.913 long intergenic non-protein coding RNA 359
68. STMND1 ENSG00000230873 9 0.912 0.912 - stathmin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:44668]
69. LOC100506142 4 0.899 - 0.899 uncharacterized LOC100506142
70. LOC100288974 LOC100288974 37 0.895 0.895 -
71. LOC101060542 3 0.893 - 0.893 uncharacterized LOC101060542
72. VPREB3 ENSG00000128218 12 0.886 0.886 - V-set pre-B cell surrogate light chain 3 [Source:HGNC Symbol;Acc:HGNC:12710]
73. CCL8 ENSG00000108700 10 0.886 - 0.886 C-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:10635]
74. FA2H ENSG00000103089 28 0.884 0.884 - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
75. F9 ENSG00000101981 2 0.867 - 0.867 coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]
76. ABCC6P1 ENSG00000256340 37 0.863 - 0.863 ATP binding cassette subfamily C member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33352]
77. LOC101928882 9 0.854 0.854 - uncharacterized LOC101928882
78. KCNC4-AS1 3 0.85 - 0.850 KCNC4 antisense RNA 1 (head to head)
79. AACSP1 ENSG00000250420 6 0.844 0.844 - acetoacetyl-CoA synthetase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:18226]
80. TMOD4 ENSG00000163157 10 0.844 0.844 - tropomodulin 4 [Source:HGNC Symbol;Acc:HGNC:11874]
81. EPPIN ENSG00000101448 10 0.842 0.842 - epididymal peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:15932]
82. LINC01069 ENSG00000236133 10 0.84 0.840 - long intergenic non-protein coding RNA 1069 [Source:HGNC Symbol;Acc:HGNC:49109]
83. IBSP ENSG00000029559 1 0.833 - 0.833 integrin binding sialoprotein [Source:HGNC Symbol;Acc:HGNC:5341]
84. GCSAML ENSG00000169224 47 0.829 - 0.829 germinal center associated signaling and motility like [Source:HGNC Symbol;Acc:HGNC:29583]
85. C10orf95 ENSG00000120055 1 0.827 - 0.827 chromosome 10 open reading frame 95 [Source:HGNC Symbol;Acc:HGNC:25880]
86. FLJ13224 ENSG00000177340, ENSG00000282176 10 0.819 0.819 - uncharacterized LOC79857 [Source:NCBI gene;Acc:79857]
87. HIST1H4F ENSG00000274618 14 0.809 0.809 - histone cluster 1 H4 family member f [Source:HGNC Symbol;Acc:HGNC:4783]
88. LOC101927973 18 0.809 0.809 - uncharacterized LOC101927973
89. SAP30L-AS1 ENSG00000245275 3 0.792 0.792 - SAP30L antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:26760]
90. FLG ENSG00000143631 7 0.792 0.792 - filaggrin [Source:HGNC Symbol;Acc:HGNC:3748]
91. LINC00528 ENSG00000269220 5 0.79 0.790 - long intergenic non-protein coding RNA 528 [Source:HGNC Symbol;Acc:HGNC:26875]
92. LOC100506368 8 0.79 0.790 - uncharacterized LOC100506368
93. LRRIQ4 ENSG00000188306 7 0.79 0.790 - leucine rich repeats and IQ motif containing 4 [Source:HGNC Symbol;Acc:HGNC:34298]
94. KRTAP5-10 ENSG00000204572 11 0.789 0.789 - keratin associated protein 5-10 [Source:HGNC Symbol;Acc:HGNC:23605]
95. LINC00624 ENSG00000278811 6 0.783 - 0.783 long intergenic non-protein coding RNA 624 [Source:HGNC Symbol;Acc:HGNC:44254]
96. HTR3A ENSG00000166736 15 0.782 - 0.782 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
97. MKRN9P ENSG00000258128 4 0.78 - 0.780 makorin ring finger protein 9, pseudogene [Source:HGNC Symbol;Acc:HGNC:7116]
98. IGSF22 ENSG00000179057 6 0.775 0.775 - immunoglobulin superfamily member 22 [Source:HGNC Symbol;Acc:HGNC:26750]
99. GPR158-AS1 ENSG00000233642 12 0.773 - 0.773 GPR158 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44163]
100. CNBD2 ENSG00000149646 10 0.768 - 0.768 cyclic nucleotide binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16145]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA