Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIN9

Gene Name Gene ID Reads Annotation
LIN9 ENSGALG00000009233 2968 lin-9 DREAM MuvB core complex component [Source:NCBI gene;Acc:421316]











Genes with expression patterns similar to LIN9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIN9 ENSGALG00000009233 2968 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lin-9 DREAM MuvB core complex component [Source:NCBI gene;Acc:421316]
2. FAM177A1 ENSGALG00000010046 4318 1.5 - - - - - - 0.754 0.746 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
3. MRPS30 ENSGALG00000014874 3416 1.482 - - - - - - 0.718 0.764 - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
4. PRKACB ENSGALG00000028530 12506 1.476 - - - - - 0.737 - 0.739 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
5. C1H12ORF4 2696 1.455 - - - - - 0.717 - 0.738 - - chromosome 1 open reading frame, human C12orf4
6. OFD1 ENSGALG00000016576 1916 0.824 - - - - - 0.824 - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
7. TXLNA 6802 0.82 - - - - - - - 0.820 - - taxilin alpha, transcript variant X2
8. ENSGALG00000006740 ENSGALG00000006740 30 0.812 - - - - - 0.812 - - - -
9. PTGFRN ENSGALG00000015464 14584 0.81 - - - - - - 0.810 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
10. LSG1 ENSGALG00000007058 4591 0.801 - - - - - - - 0.801 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
11. GPHN ENSGALG00000009587 3045 0.78 - - - - - - 0.780 - - - gephyrin [Source:NCBI gene;Acc:428878]
12. TRAF7 ENSGALG00000005767 4615 0.775 - - - - - - 0.775 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
13. SURF2 ENSGALG00000003181 3500 0.774 - - - - - - 0.774 - - - surfeit 2 [Source:NCBI gene;Acc:417156]
14. MTSS1 ENSGALG00000041969 1312 0.774 - - - - - 0.774 - - - - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
15. WDR92 ENSGALG00000008760 3934 0.771 - - - - - 0.771 - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
16. ATG4C ENSGALG00000010985 6102 0.771 - - - - - - 0.771 - - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
17. ARL9 ENSGALG00000026653 1867 0.767 - - - - - - - 0.767 - - ADP ribosylation factor like GTPase 9 [Source:HGNC Symbol;Acc:HGNC:23592]
18. SUCO ENSGALG00000003081 4116 0.764 - - - - - - - 0.764 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
19. CDC34 ENSGALG00000024332 4562 0.763 - - - - - - 0.763 - - - cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
20. SGSM2 ENSGALG00000005737 95 0.761 - - - - - 0.761 - - - - small G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29026]
21. CHN1 ENSGALG00000009293 6415 0.76 - - - - - - 0.760 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
22. TARDBP ENSGALG00000002906 24748 0.759 - - - - - - 0.759 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
23. EXOG ENSGALG00000006153 4551 0.759 - - - - - - - 0.759 - - exo/endonuclease G [Source:HGNC Symbol;Acc:HGNC:3347]
24. TBK1 ENSGALG00000009840 1650 0.756 - - - - - - - 0.756 - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
25. gga-mir-7474 ENSGALG00000033766 5727 0.755 - - - - - 0.755 - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
26. SUV420H1 SUV420H1 2361 0.754 - - - - - 0.754 - - - -
27. ARL1 ENSGALG00000011651 3230 0.753 - - - - - - 0.753 - - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
28. ALAS1 3660 0.752 - - - - - - 0.752 - - - 5'-aminolevulinate synthase 1, transcript variant X1
29. KIAA0355 ENSGALG00000004949 4352 0.751 - - - - - - 0.751 - - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
30. DGCR2 ENSGALG00000005891 8405 0.751 - - - - - - 0.751 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
31. ADI1 ENSGALG00000025796 8636 0.749 - - - - - - - 0.749 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
32. IBA57 ENSGALG00000005328 4362 0.749 - - - - - - 0.749 - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
33. MAST4 ENSGALG00000014784 4153 0.748 - - - - - 0.748 - - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
34. PEX10 ENSGALG00000001223 5704 0.748 - - - - - - - 0.748 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
35. MSANTD4 ENSGALG00000017177 3306 0.748 - - - - - - - 0.748 - - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
36. DZIP1 ENSGALG00000016895 681 0.746 - - - - - 0.746 - - - - DAZ interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:20908]
37. ASAP2 ENSGALG00000016419 1393 0.746 - - - - - 0.746 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
38. EPFIP1L ENSGALG00000007683 18050 0.745 - - - - - - 0.745 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
39. HVCN1 ENSGALG00000004562 2550 0.745 - - - - - - 0.745 - - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
40. VDAC2 ENSGALG00000005002 12592 0.744 - - - - - - 0.744 - - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
41. gga-mir-1737 ENSGALG00000025206 3910 0.744 - - - - - - 0.744 - - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
42. NUDT4 ENSGALG00000011285 2998 0.742 - - - - - - 0.742 - - - nudix hydrolase 4, transcript variant X5
43. PNPLA4 ENSGALG00000016618 142 0.741 - - - - - 0.741 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
44. EHD3 ENSGALG00000009086 14407 0.741 - - - - - - 0.741 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
45. MORC2 2505 0.741 - - - - - - - 0.741 - - MORC family CW-type zinc finger 2, transcript variant X2
46. GULP1 4107 0.74 - - - - - - 0.740 - - - GULP, engulfment adaptor PTB domain containing 1, transcript variant X13
47. CDC40 ENSGALG00000015061 6118 0.74 - - - - - - 0.740 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
48. CDC45 ENSGALG00000001616 8432 0.74 - - - - - - 0.740 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
49. TAX1BP1 ENSGALG00000042822 7728 0.74 - - - - - - 0.740 - - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
50. NMT1 ENSGALG00000000857 5770 0.739 - - - - - - 0.739 - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
51. NUMB ENSGALG00000009300 4220 0.739 - - - - - - - 0.739 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
52. C17H9ORF16 C17H9ORF16 7908 0.739 - - - - - - 0.739 - - -
53. CCDC132 CCDC132 2632 0.738 - - - - - - - 0.738 - -
54. SLC30A6 ENSGALG00000010618 3197 0.738 - - - - - 0.738 - - - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
55. MED27 ENSGALG00000003683 6808 0.737 - - - - - - 0.737 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
56. CSNK1G1 ENSGALG00000030812 31618 0.737 - - - - - - 0.737 - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
57. ENSGALG00000026461 ENSGALG00000026461 61 0.737 - - - - - 0.737 - - - -
58. MIEN1 ENSGALG00000026328 3396 0.736 - - - - - - 0.736 - - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
59. NEK6 ENSGALG00000001118 20333 0.735 - - - - - - 0.735 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
60. FADS1 ENSGALG00000007127 5231 0.735 - - - - - - - 0.735 - - fatty acid desaturase 1
61. PANK4 ENSGALG00000001165 2356 0.734 - - - - - - 0.734 - - - pantothenate kinase 4 [Source:NCBI gene;Acc:100736561]
62. MBNL3 ENSGALG00000032045 10980 0.734 - - - - - - 0.734 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
63. EXOC3L1 ENSGALG00000001702 1355 0.733 - - - - - - - 0.733 - - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
64. PCTP ENSGALG00000003099 5851 0.732 - - - - - - 0.732 - - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
65. UBR2 ENSGALG00000009906 7717 0.731 - - - - - - 0.731 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
66. GCHFR ENSGALG00000032239 1608 0.73 - - - - - 0.730 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
67. CDC42BPA ENSGALG00000009158 3926 0.73 - - - - - - 0.730 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
68. LETM1 ENSGALG00000015706 2366 0.73 - - - - - - - 0.730 - - leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
69. TM4SF18 4553 0.73 - - - - - - 0.730 - - - transmembrane 4 L six family member 18, transcript variant X2
70. ABCA3 ENSGALG00000037837 1606 0.73 - - - - - - 0.730 - - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
71. RARRES1 ENSGALG00000009594 3573 0.73 - - - - - - - 0.730 - - retinoic acid receptor responder 1 [Source:NCBI gene;Acc:395209]
72. DACH1 ENSGALG00000037015 5648 0.729 - - - - - - 0.729 - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
73. SPEN ENSGALG00000036932 9688 0.729 - - - - - - 0.729 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
74. WWC1 ENSGALG00000001826 4666 0.728 - - - - - - - 0.728 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
75. NAV2 ENSGALG00000003999 6587 0.727 - - - - - - 0.727 - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
76. FIGNL1 ENSGALG00000026363 2194 0.725 - - - - - 0.725 - - - - fidgetin like 1, transcript variant X2
77. NOC2L ENSGALG00000002222 6569 0.725 - - - - - - - 0.725 - - NOC2 like nucleolar associated transcriptional repressor [Source:NCBI gene;Acc:419433]
78. MAP3K7 ENSGALG00000015596 15164 0.725 - - - - - - 0.725 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
79. TPRKB ENSGALG00000013018 8687 0.724 - - - - - - 0.724 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
80. CDR2L ENSGALG00000026295 4142 0.723 - - - - - - - 0.723 - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
81. MPG ENSGALG00000028691 1874 0.723 - - - - - - - 0.723 - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
82. UBN1 ENSGALG00000031416 2848 0.723 - - - - - - 0.723 - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
83. MFAP1 ENSGALG00000028295 6043 0.723 - - - - - - - 0.723 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
84. BRIX1 ENSGALG00000003373 27878 0.723 - - - - - - - - - 0.723 BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
85. UBE2E3 ENSGALG00000020793 9517 0.722 - - - - - - 0.722 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
86. TET1 ENSGALG00000031604 13002 0.722 - - - - - - 0.722 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
87. TMEM70 ENSGALG00000033568 10720 0.722 - - - - - - 0.722 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
88. SWIP-1 SWIP-1 6024 0.72 - - - - - - - 0.720 - -
89. RUVBL1 ENSGALG00000005931 9379 0.72 - - - - - - 0.720 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
90. CDC42BPB ENSGALG00000011432 8220 0.72 - - - - - - 0.720 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
91. NRBP1 ENSGALG00000016512 4725 0.719 - - - - - - 0.719 - - - nuclear receptor binding protein 1 [Source:NCBI gene;Acc:421985]
92. HERC2 ENSGALG00000016739 9900 0.719 - - - - - - 0.719 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
93. C1orf174 ENSGALG00000000975 4947 0.719 - - - - - - 0.719 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
94. CCNC ENSGALG00000015471 6497 0.718 - - - - - - - 0.718 - - cyclin C [Source:NCBI gene;Acc:421791]
95. JOSD1 ENSGALG00000041766 1445 0.718 - - - - - - - 0.718 - - Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
96. MSRA ENSGALG00000028032 2607 0.718 - - - - - - - 0.718 - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
97. KLHL13 KLHL13 2712 0.718 - - - - - - 0.718 - - -
98. SS18 ENSGALG00000015119 4687 0.718 - - - - - - 0.718 - - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
99. LOC419851 ENSGALG00000023953 80 0.718 - - - - - 0.718 - - - - complement component 4 binding protein, alpha chain
100. IFRD1 ENSGALG00000009448 8865 0.717 - - - - - - 0.717 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]

There are 71 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA