Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIN9

Gene Name Gene ID Reads Annotation
LIN9 ENSDARG00000028475 227 lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]










Genes with expression patterns similar to LIN9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LIN9 ENSDARG00000028475 227 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
2. eltd1 eltd1 295 1.842 - - - - - 0.936 0.906 - -
3. tbcela ENSDARG00000002682 1179 1.791 - - - - - 0.874 0.917 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
4. C4H12orf45 C4H12orf45 483 1.781 - - - - - 0.944 0.837 - -
5. cdk10 ENSDARG00000034256 166 1.777 - - - - - 0.899 0.878 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
6. si:ch211-162i8.5 ENSDARG00000111716 76 1.756 - - - - - 0.859 0.897 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
7. si:ch211-208h1.1 si:ch211-208h1.1 262 1.745 - - - - - 0.863 0.882 - -
8. si:ch211-163b2.4 ENSDARG00000094890 140 1.721 - - - - - 0.881 0.840 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
9. slc30a10 ENSDARG00000103983 46 1.717 - - - - - 0.884 0.833 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
10. rnf11a ENSDARG00000010442 592 1.709 - 0.790 - - - 0.919 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
11. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.709 - - - - - 0.881 0.828 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
12. msxe msxe 362 1.693 - - - 0.774 - 0.919 - - -
13. PMFBP1 ENSDARG00000101917 292 1.687 0.777 - - - - 0.910 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
14. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.685 - 0.767 - - - 0.918 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
15. tgfbrap1 ENSDARG00000061508 504 1.682 - - - - - 0.905 0.777 - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
16. CT867948.2 CT867948.2 131 1.679 - - - - - 0.827 0.852 - -
17. lamc3 ENSDARG00000093572 562 1.675 - 0.888 0.787 - - - - - - laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
18. zgc:162160 ENSDARG00000060259 117 1.671 - - 0.832 - - 0.839 - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
19. eif3hb ENSDARG00000036116 203 1.667 - - - - - 0.887 0.780 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
20. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.665 0.746 - - - - 0.919 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
21. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.662 - - - 0.751 - 0.911 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
22. ndst3 ENSDARG00000041776 605 1.652 - - - - - 0.876 0.776 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
23. nexmifb ENSDARG00000029296 416 1.649 - - - 0.776 - 0.873 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
24. commd3 ENSDARG00000045402 1601 1.644 - - - - - 0.944 0.700 - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
25. st6galnac5a ENSDARG00000039220 76 1.639 0.731 - - - - 0.908 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
26. ift52 ENSDARG00000045025 606 1.637 - 0.899 - - - 0.738 - - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
27. ENSDARG00000077141 ENSDARG00000077141 227 1.635 - - 0.715 - - 0.920 - - -
28. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 1.629 - - - - - 0.795 0.834 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
29. C8H1orf194 C8H1orf194 111 1.623 - - - 0.765 - 0.858 - - -
30. DVL3 1098 1.614 - - - 0.810 - 0.804 - - - dishevelled segment polarity protein 3
31. ap2m1b ENSDARG00000033899 317 1.607 - - - - - 0.704 0.903 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
32. TESK1 TESK1 109 1.607 - - 0.749 - - 0.858 - - -
33. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.607 - 0.778 - - - 0.829 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
34. KLHL35 ENSDARG00000063577 77 1.605 - - - 0.777 - - 0.828 - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
35. traip ENSDARG00000011262 410 1.605 - - - - - 0.767 0.838 - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
36. mir133a-1 77 1.598 - - 0.724 - - 0.874 - - - microRNA 133a-1
37. elk1 ENSDARG00000078066 414 1.596 - - - 0.711 - 0.885 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
38. CR847906.1 ENSDARG00000099493 88 1.595 - - 0.752 - - 0.843 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
39. zgc:171489 ENSDARG00000052300 119 1.59 - - - - - 0.711 0.879 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
40. BX927294.1 BX927294.1 361 1.59 - - - 0.723 - 0.867 - - -
41. wu:fb30e12 wu:fb30e12 1254 1.587 - - 0.800 - - 0.787 - - -
42. thbs3b ENSDARG00000012060 922 1.585 - 0.872 - - - 0.713 - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
43. CABZ01061567.1 CABZ01061567.1 295 1.573 - - - - - 0.728 0.845 - -
44. fgfr1op2 ENSDARG00000009657 904 1.569 - - - 0.834 - 0.735 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
45. LPHN3 LPHN3 195 1.569 - - 0.748 - - 0.821 - - -
46. trnt1 ENSDARG00000075297, ENSDARG00000116975 366 1.567 - - - - - 0.771 0.796 - - tRNA nucleotidyl transferase, CCA-adding, 1 [Source:ZFIN;Acc:ZDB-GENE-040625-176]
47. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.561 - - - 0.768 - 0.793 - - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
48. dnpep ENSDARG00000022599, ENSDARG00000111999 913 1.559 - 0.790 - - - 0.769 - - - aspartyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-040426-852]
49. avpr1b avpr1b 58 1.559 - - 0.782 - - 0.777 - - -
50. cog8 ENSDARG00000002798 229 1.553 - - 0.759 - - 0.794 - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
51. si:ch211-199m9.3 50 1.547 0.777 0.770 - - - - - - - si:ch211-199m9.3, transcript variant X3
52. phf10 ENSDARG00000070084 1210 1.546 - - - - - 0.820 0.726 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
53. fbrsl1 ENSDARG00000058232 885 1.543 - - 0.734 - - 0.809 - - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
54. stox2a ENSDARG00000070162 1620 1.543 - 0.727 - - - 0.816 - - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
55. ddx42 ENSDARG00000037928 1659 1.542 - - - - - 0.762 0.780 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
56. carf ENSDARG00000019950 303 1.542 - - - - - 0.754 0.788 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
57. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 1.539 - - 0.756 - - - 0.783 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
58. SACM1L SACM1L 416 1.536 - - - 0.721 - 0.815 - - -
59. si:ch211-113e8.10 ENSDARG00000079631 498 1.536 - - - 0.747 - 0.789 - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
60. si:ch211-220f16.2 ENSDARG00000007976 638 1.532 - - 0.702 - - 0.830 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
61. stap2a ENSDARG00000092810 591 1.532 - - - 0.727 - 0.805 - - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
62. hoxb2a ENSDARG00000000175 1122 1.521 - 0.782 - - - - 0.739 - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
63. bend3 ENSDARG00000076903 320 1.517 - - - 0.763 - 0.754 - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
64. xpnpep3 ENSDARG00000007916 166 1.517 - - - - - 0.742 0.775 - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
65. mn1b ENSDARG00000079248 882 1.512 - 0.735 - - - 0.777 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
66. CAPN15 ENSDARG00000060600 248 1.51 - - - 0.755 - 0.755 - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
67. slc16a9b ENSDARG00000104687 826 1.506 - - - - - 0.713 0.793 - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
68. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.502 - - - 0.775 - 0.727 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
69. tesk2 ENSDARG00000061450 261 1.499 - - 0.750 - - 0.749 - - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
70. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.495 - - - - - 0.714 0.781 - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
71. stat5.2 stat5.2 1187 1.493 - - - 0.740 - 0.753 - - -
72. srp68 ENSDARG00000020820 1719 1.488 - - - - - 0.745 0.743 - - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
73. BX649554.3_1 BX649554.3_1 1071 1.472 0.709 - - 0.763 - - - - -
74. GRM2 GRM2 372 1.471 - - - 0.701 - 0.770 - - -
75. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 1.471 - - - - - 0.766 - 0.705 - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
76. furinb ENSDARG00000070971 213 1.469 0.702 - - 0.767 - - - - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
77. ATG4D ATG4D 648 1.469 - - - - - 0.742 0.727 - -
78. gltpd1 gltpd1 377 1.468 - - - 0.723 - 0.745 - - -
79. nck1a ENSDARG00000074262 833 1.468 - 0.722 - - - - 0.746 - - NCK adaptor protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-547]
80. slc17a5 ENSDARG00000055190 857 1.437 - 0.720 - - - - 0.717 - - solute carrier family 17 (acidic sugar transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060929-1158]
81. setd8b 2528 1.437 - - - 0.736 - - 0.701 - - SET domain containing (lysine methyltransferase) 8b
82. fam60al_1 949 1.422 - - - 0.701 - 0.721 - - - family with sequence similarity 60, member A, like
83. lgi3 ENSDARG00000041358 46 0.977 - - - - - 0.977 - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
84. KAT5 KAT5 623 0.973 - - - - - 0.973 - - -
85. CU638738.1 CU638738.1 131 0.969 - - - - - 0.969 - - -
86. OVOL1 75 0.965 - - - 0.965 - - - - - ovo-like zinc finger 1, transcript variant X1
87. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 0.961 - - - - - 0.961 - - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
88. KCNIP4 ENSDARG00000088100 86 0.96 - - - - - 0.960 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
89. TRPC4_1 TRPC4_1 212 0.958 - - - - - 0.958 - - -
90. mmrn2b ENSDARG00000073711 391 0.957 - - - - - - 0.957 - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
91. CCDC142 ENSDARG00000101377 161 0.956 - - - - - 0.956 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
92. FP102071.1 ENSDARG00000097994 170 0.951 - - - - - 0.951 - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
93. neto1 ENSDARG00000068483 13 0.95 - - - - - 0.950 - - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]
94. dpp6b ENSDARG00000024744 234 0.949 - - - - - 0.949 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
95. KLHL14 ENSDARG00000045275 155 0.949 - - - - - 0.949 - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
96. chst13 chst13 669 0.947 - - - - - 0.947 - - -
97. wdr45l wdr45l 123 0.946 - - - 0.946 - - - - -
98. ENSDARG00000086878 ENSDARG00000086878 332 0.946 - - - - - 0.946 - - -
99. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 0.945 - - - - - 0.945 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
100. entpd3 ENSDARG00000035309 263 0.944 - - - - - 0.944 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]

There are 1778 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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