Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LIN52

Gene Name Gene ID Reads Annotation
LIN52 ENSGALG00000020419 37 lin-52 DREAM MuvB core complex component [Source:NCBI gene;Acc:423346]











Genes with expression patterns similar to LIN52

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIN52 ENSGALG00000020419 37 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 lin-52 DREAM MuvB core complex component [Source:NCBI gene;Acc:423346]
2. ABCD4 ENSGALG00000010229 3 1.725 - - - - - 0.725 - - - 1.000 ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
3. FAM83A ENSGALG00000041748 8 1.725 - - - - - 0.725 - - - 1.000 family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
4. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - - - - - 1.000
5. BICD2 ENSGALG00000005249 17 1 - - - - - - - - - 1.000 BICD cargo adaptor 2 [Source:HGNC Symbol;Acc:HGNC:17208]
6. GRHL2 ENSGALG00000037687 3 1 - - - - - - - - - 1.000 grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
7. TMEM259 ENSGALG00000002029 8 1 - - - - - - - - - 1.000 transmembrane protein 259 [Source:HGNC Symbol;Acc:HGNC:17039]
8. CHSY1 ENSGALG00000026468 4 1 - - - - - - - - - 1.000 chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
9. RAB37 ENSGALG00000027789 17 1 - - - - - - - - - 1.000 RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
10. ARHGAP22 ENSGALG00000006137 4 1 - - - - - - - - - 1.000 Rho GTPase activating protein 22, transcript variant X3
11. CDH8 ENSGALG00000005319 2 1 - - - - - - - - - 1.000 cadherin 8 [Source:NCBI gene;Acc:427553]
12. NKAIN4 ENSGALG00000005774 10 1 - - - - - - - - - 1.000 sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
13. BCAS1 ENSGALG00000007796 379 1 - - - - - - - - - 1.000 breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
14. SIX6 ENSGALG00000020359 4 1 - - - - - - - - - 1.000 SIX homeobox 6 [Source:NCBI gene;Acc:395843]
15. BFGF BFGF 1 1 - - - - - - - - - 1.000
16. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 1 - - - - - - - - - 1.000 MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
17. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - - - - 1.000 gga-mir-1801 [Source:miRBase;Acc:MI0007545]
18. C1orf170 C1orf170 7 1 - - - - - - - - - 1.000
19. JAKMIP3 ENSGALG00000010486 2 1 - - - - - - - - - 1.000 Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
20. ODF2L ENSGALG00000006804 10 1 - - - - - - - - - 1.000 outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
21. LNX2 LNX2 4 1 - - - - - - - - - 1.000
22. KLHL23 ENSGALG00000020737 13 1 - - - - - - - - - 1.000 kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
23. ATG7 ENSGALG00000004932 8 1 - - - - - - - - - 1.000 autophagy related 7 [Source:NCBI gene;Acc:415961]
24. SLC13A1 ENSGALG00000008874 2 1 - - - - - - - - - 1.000 solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
25. GPR65 ENSGALG00000010595 2 1 - - - - - - - - - 1.000 G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
26. ENSGALG00000018626 ENSGALG00000018626 1 1 - - - - - - - - - 1.000
27. FGA ENSGALG00000009266 291 1 - - - - - - - - - 1.000 fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
28. IMPG1 ENSGALG00000015897 4 1 - - - - - - - - - 1.000 interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
29. PCDH7 ENSGALG00000033883 6 1 - - - - - - - - - 1.000 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
30. MTMR7 13 1 - - - - - - - - - 1.000 myotubularin related protein 7, transcript variant X1
31. PLEKHF1 ENSGALG00000004474 8 1 - - - - - - - - - 1.000 pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
32. HOXD9 ENSGALG00000027513 89 1 - - - - - - - - - 1.000 homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
33. FBXO43 ENSGALG00000038940 7 1 - - - - - - - - - 1.000 F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
34. ATP6V0D1 ENSGALG00000002237 13 1 - - - - - - - - - 1.000 ATPase H+ transporting V0 subunit d1 [Source:NCBI gene;Acc:415674]
35. MARCO ENSGALG00000012119 5 1 - - - - - - - - - 1.000 macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
36. LRRC58 ENSGALG00000033186 15 1 - - - - - - - - - 1.000 leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
37. RBKS ENSGALG00000010043 3 1 - - - - - - - - - 1.000 ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
38. ADAM33 ENSGALG00000030602 7 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
39. ADCY1 ENSGALG00000031170 4 1 - - - - - - - - - 1.000 adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
40. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - - - - 1.000
41. LDB1 ENSGALG00000007641 2 1 - - - - - - - - - 1.000 LIM domain binding 1 [Source:NCBI gene;Acc:395952]
42. CACNA1H ENSGALG00000005215 110 1 - - - - - - - - - 1.000 calcium voltage-gated channel subunit alpha1 H [Source:HGNC Symbol;Acc:HGNC:1395]
43. C20orf85 ENSGALG00000027484 3 1 - - - - - - - - - 1.000 chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
44. ENSGALG00000002252 ENSGALG00000002252 19 1 - - - - - - - - - 1.000
45. SLC4A2 ENSGALG00000034284 3 1 - - - - - - - - - 1.000 solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
46. TTBK1 ENSGALG00000008627 8 0.955 - - - - - - - - - 0.955 tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
47. ZMAT3 ENSGALG00000040948 4 0.883 - - - - - - - - - 0.883 zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
48. ENSGALG00000005498 ENSGALG00000005498 11 0.864 - - - - - - - - - 0.864
49. FSIP1 ENSGALG00000009624 40 0.864 - - - - - - - 0.864 - - fibrous sheath interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21674]
50. BHLHE40 ENSGALG00000008308 1 0.851 - - - - - - - - - 0.851 basic helix-loop-helix family member e40 [Source:NCBI gene;Acc:416108]
51. ENSGALG00000023393 ENSGALG00000023393 1 0.851 - - - - - - - - - 0.851
52. RALYL ENSGALG00000036938 1 0.851 - - - - - - - - - 0.851 RALY RNA binding protein like [Source:NCBI gene;Acc:420203]
53. U6_1 U6_1 3 0.851 - - - - - - - - - 0.851
54. CNKSR3 ENSGALG00000027159 41 0.84 - - 0.840 - - - - - - - CNKSR family member 3, transcript variant X2
55. GLRB ENSGALG00000009395 9 0.832 - - - - - - - - - 0.832 glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329]
56. ARRDC1 ENSGALG00000008475 80 0.825 - - - - - - - - - 0.825 arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
57. GDAP1L1 ENSGALG00000004309 47 0.808 - - - - - - - 0.808 - - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
58. KIAA0907 ENSGALG00000014652 38 0.807 - - - - - - - 0.807 - - KIAA0907 [Source:NCBI gene;Acc:425070]
59. ZPLD1 ENSGALG00000015347 12 0.8 - - - - - - - - - 0.800 zona pellucida like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27022]
60. TMEM8C ENSGALG00000021520 30 0.793 - - - - - - - - - 0.793 Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
61. NPY2R ENSGALG00000009280 29 0.779 - - - - - - - - - 0.779 neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
62. NRP2 ENSGALG00000008621 29 0.778 - - - - - - - - - 0.778 neuropilin 2 [Source:NCBI gene;Acc:374157]
63. CPED1 ENSGALG00000009002 71 0.77 - - - - - - - - - 0.770 cadherin-like and PC-esterase domain containing 1, transcript variant X4
64. ENSGALG00000026142 ENSGALG00000026142 85 0.768 - - 0.768 - - - - - - -
65. HOXB6 ENSGALG00000037619 435 0.764 - - - - - - - 0.764 - - homeobox B6 [Source:HGNC Symbol;Acc:HGNC:5117]
66. ENSGALG00000005155 ENSGALG00000005155 2257 0.761 - - - - - - - 0.761 - -
67. CHST11 ENSGALG00000030607 466 0.758 - - - - - - - 0.758 - - carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]
68. CCDC33 7 0.758 - - - - - - - - - 0.758 coiled-coil domain containing 33, transcript variant X2
69. ASB7 ENSGALG00000007115 3 0.751 - - - - - - - - - 0.751 ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
70. VWA3B ENSGALG00000040709 5 0.751 - - - - - - - - - 0.751 von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
71. KERA ENSGALG00000011270 4204 0.75 - - - - - - - 0.750 - - keratocan [Source:NCBI gene;Acc:373995]
72. ST18 ENSGALG00000015254 117 0.746 - - - - - - - - - 0.746 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
73. GNAI1 ENSGALG00000008382 195 0.746 - - - - - - - 0.746 - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
74. PM20D2 ENSGALG00000015779 1301 0.741 - - - - - - - 0.741 - - peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
75. PRDM15 ENSGALG00000019178 2729 0.738 - - - - - - - 0.738 - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
76. GAREM GAREM 16 0.738 - - - - - 0.738 - - - -
77. GRPR ENSGALG00000027960 22 0.732 - - - - - - - - - 0.732 gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
78. MNX1 ENSGALG00000041154 244 0.726 - - - - - - - - - 0.726 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
79. PLEKHF2 ENSGALG00000040248 350 0.726 - - - - - - - 0.726 - - pleckstrin homology and FYVE domain containing 2 [Source:NCBI gene;Acc:420234]
80. BEST3 ENSGALG00000010029 11 0.725 - - - - - 0.725 - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
81. CCL19 ENSGALG00000028256 6 0.725 - - - - - 0.725 - - - - C-C motif chemokine ligand 19 [Source:NCBI gene;Acc:427406]
82. LRRC7 ENSGALG00000011284 13 0.725 - - - - - 0.725 - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
83. SULT1B ENSGALG00000023122 7 0.725 - - - - - 0.725 - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
84. ENSGALG00000022694 ENSGALG00000022694 1 0.725 - - - - - 0.725 - - - -
85. NR3C1 ENSGALG00000032992 4 0.725 - - - - - 0.725 - - - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
86. POLR3G ENSGALG00000014650 7 0.725 - - - - - 0.725 - - - - RNA polymerase III subunit G, transcript variant X2
87. CNST ENSGALG00000010649 18 0.725 - - - - - 0.725 - - - - consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
88. MEL1B MEL1B 5 0.725 - - - - - 0.725 - - - -
89. NIM1 NIM1 18 0.725 - - - - - 0.725 - - - -
90. SLC45A2 ENSGALG00000003310 55 0.725 - - - - - 0.725 - - - - solute carrier family 45 member 2 [Source:NCBI gene;Acc:431665]
91. C11orf87 ENSGALG00000017155 2 0.725 - - - - - 0.725 - - - - chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
92. RCAN2 ENSGALG00000016709 8 0.725 - - - - - 0.725 - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
93. SETD8 SETD8 392 0.725 - - - - - - - 0.725 - -
94. SLCO2A1 ENSGALG00000006471 18 0.725 - - - - - 0.725 - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
95. MILR1 ENSGALG00000046212 7 0.725 - - - - - 0.725 - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
96. ALPI ENSGALG00000023866 19 0.725 - - - - - 0.725 - - - - alkaline phosphatase, intestinal, transcript variant X2
97. C3orf33 ENSGALG00000026293 12 0.725 - - - - - 0.725 - - - - chromosome 3 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:26434]
98. IGLL1 ENSGALG00000021139 1 0.725 - - - - - 0.725 - - - - immunoglobulin lambda-like polypeptide 1 [Source:NCBI gene;Acc:416928]
99. gga-mir-20b gga-mir-20b 7 0.725 - - - - - 0.725 - - - -
100. TGFBR2 ENSGALG00000011442 3 0.725 - - - - - 0.725 - - - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]

There are 70 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA