Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIMS1

Gene Name Gene ID Reads Annotation
LIMS1 ENSG00000169756 4742 LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]



Genes with expression patterns similar to LIMS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LIMS1 ENSG00000169756 4742 2 1.000 1.000 LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]
2. CLOCK ENSG00000134852 6285 0.812 - 0.812 clock circadian regulator [Source:HGNC Symbol;Acc:HGNC:2082]
3. ATRX ENSG00000085224 27422 0.808 - 0.808 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
4. TBL1XR1 ENSG00000177565 10246 0.801 - 0.801 transducin beta like 1 X-linked receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]
5. MED13 ENSG00000108510 4518 0.8 - 0.800 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
6. SUZ12 ENSG00000178691 6660 0.798 - 0.798 SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
7. PPP2R5E ENSG00000154001 3818 0.793 - 0.793 protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
8. UBE3A ENSG00000114062 9252 0.793 - 0.793 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
9. CHD9 ENSG00000177200 17642 0.789 - 0.789 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
10. MKL2 18184 0.784 - 0.784 MKL1/myocardin like 2, transcript variant X15
11. TNRC6B ENSG00000100354 7721 0.782 - 0.782 trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:HGNC:29190]
12. PRPF40A ENSG00000196504 9481 0.779 - 0.779 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
13. PHIP ENSG00000146247 9731 0.779 - 0.779 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
14. SEC62 ENSG00000008952 15823 0.779 - 0.779 SEC62 homolog, preprotein translocation factor [Source:HGNC Symbol;Acc:HGNC:11846]
15. RB1CC1 ENSG00000023287 3626 0.775 - 0.775 RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
16. RAD50 ENSG00000113522 3743 0.77 - 0.770 RAD50 double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
17. AKAP9 ENSG00000127914 5166 0.766 - 0.766 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
18. EIF1AX ENSG00000173674 24992 0.766 - 0.766 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
19. PAPD5 3995 0.764 - 0.764 PAP associated domain containing 5, transcript variant X4
20. ESF1 ENSG00000089048 5635 0.763 - 0.763 ESF1 nucleolar pre-rRNA processing protein homolog [Source:HGNC Symbol;Acc:HGNC:15898]
21. ZBTB44 ENSG00000196323 6946 0.763 - 0.763 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
22. KMT2C ENSG00000055609 2534 0.762 - 0.762 lysine methyltransferase 2C [Source:HGNC Symbol;Acc:HGNC:13726]
23. CWF19L2 ENSG00000152404 6226 0.762 - 0.762 CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
24. YTHDF3 ENSG00000185728 6048 0.761 - 0.761 YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465]
25. SMC2 ENSG00000136824 5127 0.76 - 0.760 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]
26. PLAG1 ENSG00000181690 8074 0.758 - 0.758 PLAG1 zinc finger [Source:HGNC Symbol;Acc:HGNC:9045]
27. MTF2 ENSG00000143033 11940 0.755 - 0.755 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]
28. CCDC88A ENSG00000115355 6649 0.754 - 0.754 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
29. BPTF ENSG00000171634 9128 0.754 - 0.754 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
30. TRPS1 ENSG00000104447 5961 0.753 - 0.753 transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
31. AZIN1 ENSG00000155096 7504 0.751 - 0.751 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:16432]
32. ZFHX4 ENSG00000091656 12505 0.75 - 0.750 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
33. TCF4 ENSG00000196628 15567 0.749 - 0.749 transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11634]
34. USP16 ENSG00000156256 3161 0.747 - 0.747 ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
35. CCAR1 ENSG00000060339 27115 0.745 - 0.745 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
36. ANKRD26 ENSG00000107890 2534 0.743 - 0.743 ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
37. ZMYM2 ENSG00000121741 4271 0.743 - 0.743 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
38. USP47 ENSG00000170242 5618 0.743 - 0.743 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:HGNC:20076]
39. KIF5B ENSG00000170759 16732 0.743 - 0.743 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
40. EXOC5 ENSG00000070367 4895 0.742 - 0.742 exocyst complex component 5 [Source:HGNC Symbol;Acc:HGNC:10696]
41. GOLGA4 ENSG00000144674 3716 0.742 - 0.742 golgin A4 [Source:HGNC Symbol;Acc:HGNC:4427]
42. ZNF518A ENSG00000177853 2730 0.742 - 0.742 zinc finger protein 518A [Source:HGNC Symbol;Acc:HGNC:29009]
43. CUL5 ENSG00000166266 3777 0.741 - 0.741 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
44. SRSF11 ENSG00000116754 17402 0.74 - 0.740 serine and arginine rich splicing factor 11 [Source:HGNC Symbol;Acc:HGNC:10782]
45. ADD3 ENSG00000148700 7732 0.739 - 0.739 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
46. WDFY1 ENSG00000085449 3401 0.738 - 0.738 WD repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20451]
47. RBM27 ENSG00000091009 3201 0.736 - 0.736 RNA binding motif protein 27 [Source:HGNC Symbol;Acc:HGNC:29243]
48. ENAH ENSG00000154380 34591 0.735 - 0.735 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
49. KPNA3 ENSG00000102753 4370 0.732 - 0.732 karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]
50. SMAD2 ENSG00000175387 6821 0.731 - 0.731 SMAD family member 2 [Source:HGNC Symbol;Acc:HGNC:6768]
51. HSP90AA1 ENSG00000080824 45716 0.731 - 0.731 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
52. RAD21 ENSG00000164754 25784 0.73 - 0.730 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
53. PTEN ENSG00000171862, ENSG00000284792 8446 0.729 - 0.729 phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
54. ROCK1 ENSG00000067900 3375 0.729 - 0.729 Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]
55. NUP50 ENSG00000093000 9939 0.729 - 0.729 nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]
56. SMC4 ENSG00000113810 14567 0.728 - 0.728 structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
57. MAP4K5 ENSG00000012983 3294 0.727 - 0.727 mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
58. MAP3K2 ENSG00000169967 2952 0.726 - 0.726 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]
59. ZNF292 ENSG00000188994 11216 0.726 - 0.726 zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]
60. ZNF644 ENSG00000122482 3186 0.724 - 0.724 zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
61. CEBPZ ENSG00000115816 4024 0.724 - 0.724 CCAAT enhancer binding protein zeta [Source:HGNC Symbol;Acc:HGNC:24218]
62. RNF139 ENSG00000170881 2163 0.724 - 0.724 ring finger protein 139 [Source:HGNC Symbol;Acc:HGNC:17023]
63. SLC38A2 ENSG00000134294 18805 0.722 - 0.722 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
64. SOCS6 ENSG00000170677 2759 0.721 - 0.721 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:HGNC:16833]
65. TAX1BP1 ENSG00000106052 11514 0.72 - 0.720 Tax1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11575]
66. YAP1 ENSG00000137693 18875 0.72 - 0.720 Yes associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16262]
67. PPM1A ENSG00000100614 8709 0.72 - 0.720 protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
68. STAG2 ENSG00000101972 5606 0.719 - 0.719 stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
69. PTPN12 ENSG00000127947 7897 0.719 - 0.719 protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]
70. DCP2 ENSG00000172795 5680 0.718 - 0.718 decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]
71. DDX3X ENSG00000215301 7653 0.718 - 0.718 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
72. UACA ENSG00000137831 1505 0.718 - 0.718 uveal autoantigen with coiled-coil domains and ankyrin repeats [Source:HGNC Symbol;Acc:HGNC:15947]
73. LARP7 ENSG00000174720 4968 0.717 - 0.717 La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
74. MAP9 ENSG00000164114 2246 0.717 - 0.717 microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118]
75. ZFR ENSG00000056097 6491 0.716 - 0.716 zinc finger RNA binding protein [Source:HGNC Symbol;Acc:HGNC:17277]
76. EPM2AIP1 ENSG00000178567 25438 0.714 - 0.714 EPM2A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:19735]
77. IREB2 ENSG00000136381 5421 0.713 - 0.713 iron responsive element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6115]
78. RWDD1 ENSG00000111832 4883 0.713 - 0.713 RWD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20993]
79. CGGBP1 ENSG00000163320 8529 0.712 - 0.712 CGG triplet repeat binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1888]
80. KRCC1 ENSG00000172086 2251 0.711 - 0.711 lysine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:28039]
81. FXR1 ENSG00000114416 5836 0.71 - 0.710 FMR1 autosomal homolog 1 [Source:HGNC Symbol;Acc:HGNC:4023]
82. ZNF131 ENSG00000172262 4422 0.709 - 0.709 zinc finger protein 131 [Source:HGNC Symbol;Acc:HGNC:12915]
83. PCDH7 ENSG00000169851 5460 0.709 - 0.709 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
84. PPP1CB ENSG00000213639 14737 0.709 - 0.709 protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]
85. SREK1IP1 ENSG00000153006 5833 0.708 - 0.708 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
86. CEP290 ENSG00000198707 1212 0.708 - 0.708 centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
87. BTBD7 ENSG00000011114, ENSG00000277222 2831 0.708 - 0.708 BTB domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18269]
88. CREBRF ENSG00000164463 913 0.708 - 0.708 CREB3 regulatory factor [Source:HGNC Symbol;Acc:HGNC:24050]
89. TMEM106B ENSG00000106460 4086 0.708 - 0.708 transmembrane protein 106B [Source:HGNC Symbol;Acc:HGNC:22407]
90. IRF2BP2 ENSG00000168264 12261 0.708 - 0.708 interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21729]
91. ZNF217 ENSG00000171940 6009 0.708 - 0.708 zinc finger protein 217 [Source:HGNC Symbol;Acc:HGNC:13009]
92. PPIG ENSG00000138398 9384 0.707 - 0.707 peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
93. TERF1 ENSG00000147601 3035 0.707 - 0.707 telomeric repeat binding factor 1 [Source:HGNC Symbol;Acc:HGNC:11728]
94. NUFIP2 ENSG00000108256 6333 0.706 - 0.706 NUFIP2, FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]
95. PJA2 ENSG00000198961 6641 0.705 - 0.705 praja ring finger ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:17481]
96. PCDH17 ENSG00000118946 3309 0.705 - 0.705 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
97. MBNL2 ENSG00000139793 3212 0.704 - 0.704 muscleblind like splicing regulator 2 [Source:HGNC Symbol;Acc:HGNC:16746]
98. PBRM1 ENSG00000163939 5175 0.704 - 0.704 polybromo 1 [Source:HGNC Symbol;Acc:HGNC:30064]
99. DNAJB14 ENSG00000164031 2586 0.704 - 0.704 DnaJ heat shock protein family (Hsp40) member B14 [Source:HGNC Symbol;Acc:HGNC:25881]
100. QKI ENSG00000112531 15316 0.703 - 0.703 QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100]

There are 6 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA