Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LIMD2

Gene Name Gene ID Reads Annotation
LIMD2 ENSDARG00000078092 3414 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]










Genes with expression patterns similar to LIMD2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LIMD2 ENSDARG00000078092 3414 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
2. itgav ENSDARG00000006314 4277 2.511 - - - - - 0.788 0.772 - 0.951 integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
3. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 2.433 - 0.799 - - - 0.766 0.868 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
4. tpx2 ENSDARG00000078654 8120 2.37 - 0.846 - - - 0.789 - 0.735 - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
5. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 2.347 - 0.738 - - - 0.782 0.827 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
6. vasp vasp 3925 2.311 - 0.711 - - - 0.748 0.852 - -
7. sod3a ENSDARG00000070168 438 2.301 - 0.737 - - - 0.745 0.819 - - superoxide dismutase 3, extracellular a [Source:ZFIN;Acc:ZDB-GENE-050309-208]
8. srrt ENSDARG00000017762, ENSDARG00000114824 2158 2.276 - 0.815 - - - - 0.710 0.751 - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
9. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.797 - - - - - - 0.823 - 0.974 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
10. smad7 ENSDARG00000016858 1660 1.789 - 0.872 - - - - - - 0.917 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
11. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.782 - 0.814 - - - - - - 0.968 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
12. itgb1b.1 ENSDARG00000053232 4721 1.78 - - - - - 0.884 0.896 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
13. cd2ap ENSDARG00000015224 2830 1.773 - - - - - 0.864 0.909 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
14. zgc:100868 ENSDARG00000004748 2582 1.773 - - - - - 0.798 - - 0.975 zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
15. COLGALT1 ENSDARG00000073974 5069 1.767 - - - - - 0.798 - - 0.969 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
16. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.759 - 0.882 - - - - 0.877 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
17. nbr1 nbr1 1161 1.756 - 0.780 - - - - - - 0.976
18. nsfl1c ENSDARG00000087640 2226 1.754 - 0.785 - - - - - - 0.969 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
19. ap1s3b ENSDARG00000027966 1064 1.742 - - - - - 0.868 0.874 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
20. CC2D1A 1262 1.74 - - - - - - 0.762 - 0.978 coiled-coil and C2 domain containing 1A, transcript variant X2
21. rac2 ENSDARG00000038010 5837 1.731 - 0.819 - - - - 0.912 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
22. carhsp1 ENSDARG00000053129 2100 1.73 - - - - - 0.753 - - 0.977 calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
23. lpar2b ENSDARG00000042561 1086 1.728 - - - - - 0.818 0.910 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
24. gsk3aa ENSDARG00000029501 957 1.713 - - - - - - 0.734 - 0.979 glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
25. zgc:113442 ENSDARG00000101906 3092 1.71 - 0.767 - - - - 0.943 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
26. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.708 - 0.828 - - - - 0.880 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
27. tmbim4 ENSDARG00000014361 2549 1.707 - - - - - 0.731 - - 0.976 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
28. ncoa4 ENSDARG00000021439 4581 1.702 - - - - - - 0.728 - 0.974 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
29. zgc:92360 ENSDARG00000038151 2161 1.696 - - - - - 0.830 0.866 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
30. fn1b ENSDARG00000006526 9542 1.689 - - - - - 0.799 0.890 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
31. CABZ01080492.1 CABZ01080492.1 495 1.681 - 0.704 - - - - - - 0.977
32. TMEM179 ENSDARG00000013292 3452 1.68 - - - - - 0.790 0.890 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
33. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.678 - - - - - 0.749 - - 0.929 ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
34. CU928070.1 CU928070.1 1152 1.676 - - - - - 0.788 0.888 - -
35. dhdhl ENSDARG00000028336 844 1.669 - - - - - 0.834 0.835 - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
36. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.66 - - - - - 0.819 0.841 - - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
37. bnipl ENSDARG00000060435 1382 1.656 - - - - - 0.773 0.883 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
38. pdcd6ip ENSDARG00000025269 2522 1.649 - 0.818 - - - - 0.831 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
39. ptgs2a ENSDARG00000004539 1207 1.649 - 0.748 - - - - 0.901 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
40. casp7 ENSDARG00000091836 657 1.648 - 0.713 - - - - 0.935 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
41. si:dkey-102c8.3 ENSDARG00000113572 4779 1.648 - - - - - 0.817 0.831 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
42. SLC12A7 SLC12A7 1702 1.643 - - - - - 0.815 0.828 - -
43. sult6b1 ENSDARG00000086826 2070 1.64 - - - - - 0.842 0.798 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
44. aim1a 2981 1.638 - - - - - 0.870 0.768 - - crystallin beta-gamma domain containing 1a, transcript variant X1
45. adam10a ENSDARG00000053468 9308 1.637 - 0.860 - - - - 0.777 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
46. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.631 - 0.866 - - - - 0.765 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
47. COL28A1_1 COL28A1_1 11434 1.625 - - - - - 0.798 0.827 - -
48. IER2 IER2 604 1.622 - - - 0.754 - - 0.868 - -
49. ces3 ENSDARG00000041595, ENSDARG00000114555 647 1.618 - - - - - 0.875 0.743 - - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
50. and2 ENSDARG00000079302 20939 1.617 - - - - - 0.830 0.787 - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
51. mgst3 mgst3 3982 1.615 - 0.894 - - - 0.721 - - -
52. ube2g2 ENSDARG00000025404 1774 1.614 - 0.828 - - - - 0.786 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
53. ZC3H12A_1 ZC3H12A_1 558 1.613 - 0.885 - - - - 0.728 - -
54. pitpnaa ENSDARG00000039490 1096 1.612 - 0.769 - - - - 0.843 - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
55. ccdc3 ccdc3 559 1.608 - - - - - 0.829 0.779 - -
56. tmem176l.4 ENSDARG00000074390 1886 1.607 - - - - - 0.791 0.816 - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
57. hexb ENSDARG00000034368 3505 1.606 - - - - - 0.775 0.831 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
58. arhgef25b ENSDARG00000014465 669 1.605 - - - - - 0.728 0.877 - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
59. piezo1 ENSDARG00000076870 4704 1.605 - 0.774 - - - - 0.831 - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
60. mbpb ENSDARG00000089413 3334 1.601 - 0.799 - - - 0.802 - - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
61. CPAMD8 ENSDARG00000056530 3481 1.598 - 0.768 - - - - 0.830 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
62. slc43a2a ENSDARG00000036848 6798 1.597 - 0.736 - - - 0.861 - - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
63. sult2st1_1 ENSDARG00000033170 3074 1.593 - - - - - 0.766 0.827 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
64. cdc42ep4b ENSDARG00000045036 1295 1.592 - - - - - 0.845 0.747 - - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
65. magt1 ENSDARG00000058062 3903 1.59 - 0.720 - - - - 0.870 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
66. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.59 - 0.860 - - - - 0.730 - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
67. nuak2 ENSDARG00000063661 610 1.588 - - - - - 0.870 0.718 - - NUAK family, SNF1-like kinase, 2 [Source:ZFIN;Acc:ZDB-GENE-050208-563]
68. srpx2 ENSDARG00000034559 452 1.586 - - - - - 0.708 0.878 - - sushi-repeat containing protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-110411-231]
69. lamb1a ENSDARG00000101209 5396 1.58 - - - - - 0.770 0.810 - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
70. bambia ENSDARG00000055381 2922 1.578 - - - - - 0.719 0.859 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
71. gata6 ENSDARG00000103589 746 1.578 - - - - - 0.863 0.715 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
72. si:dkey-83k24.5 ENSDARG00000093019 506 1.577 - - - - - 0.797 0.780 - - si:dkey-83k24.5 [Source:ZFIN;Acc:ZDB-GENE-081104-440]
73. lipf ENSDARG00000018529 1849 1.577 - 0.736 - - - 0.841 - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
74. tinagl1 ENSDARG00000061231 2677 1.574 - - - - - 0.771 0.803 - - tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
75. arpc5b ENSDARG00000019062 2786 1.574 - - - - - 0.771 0.803 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
76. PLEKHA6 ENSDARG00000020328 2076 1.571 - - - - - 0.724 0.847 - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
77. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 1.57 - - - - - 0.735 0.835 - - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
78. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.569 - 0.863 - - - 0.706 - - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
79. psmd4b ENSDARG00000023279 2002 1.568 - - - - - - 0.821 0.747 - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
80. reep3 reep3 2536 1.567 - - - - - 0.797 0.770 - -
81. ATOX1 ENSDARG00000087693 4016 1.567 - 0.736 - - - - 0.831 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
82. CU862021.1 CU862021.1 5925 1.566 - - - - - 0.720 0.846 - -
83. bach1 bach1 1121 1.565 - - - - - 0.861 0.704 - -
84. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 1.564 - - - - - 0.811 0.753 - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
85. gata3 ENSDARG00000016526 1857 1.562 - 0.772 - - - 0.790 - - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
86. scamp2l ENSDARG00000017010 491 1.561 - - - - - 0.757 0.804 - - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
87. gmppab ENSDARG00000023498 1272 1.557 - 0.749 - - - - 0.808 - - GDP-mannose pyrophosphorylase Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1550]
88. osbpl7 ENSDARG00000012981, ENSDARG00000112388 1507 1.556 - - - - - 0.798 0.758 - - oxysterol binding protein-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-212]
89. chl1a ENSDARG00000077881 1488 1.555 - - - - - 0.757 0.798 - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
90. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.554 - - - - - 0.759 0.795 - - coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
91. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.552 - 0.719 - - - - 0.833 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
92. ARHGEF17 ENSDARG00000101644 625 1.552 - 0.836 - 0.716 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
93. OMG OMG 1202 1.548 - - - - - 0.718 0.830 - -
94. pnpla7a ENSDARG00000062986 1793 1.548 - 0.791 - - - - 0.757 - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
95. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.546 - 0.832 - - - - 0.714 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
96. gpd1b ENSDARG00000043180 6002 1.545 - - - - - 0.845 0.700 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
97. ppp1r13l ENSDARG00000013777 2260 1.545 - 0.748 - - - - 0.797 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
98. pvrl1b 1645 1.544 - 0.763 - - - - 0.781 - - poliovirus receptor-related 1b
99. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 1.542 - - - - - 0.756 0.786 - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
100. trim71 ENSDARG00000075593 2750 1.541 - - - - - 0.827 0.714 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]

There are 1803 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA