Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIMD2

Gene Name Gene ID Reads Annotation
LIMD2 ENSGALG00000000529 30617 LIM domain containing 2 [Source:NCBI gene;Acc:419955]











Genes with expression patterns similar to LIMD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIMD2 ENSGALG00000000529 30617 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain containing 2 [Source:NCBI gene;Acc:419955]
2. ATG3 ENSGALG00000015204 11277 1.593 - - - - - - 0.830 0.763 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
3. WASF1 ENSGALG00000015066 5628 1.585 - - - - - - 0.730 0.855 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
4. COMMD10 ENSGALG00000002308 7442 1.578 - - - - - - 0.834 0.744 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
5. EIF2B EIF2B 28702 1.572 - - - - - 0.741 0.831 - - -
6. WFDC1 ENSGALG00000005503 6152 1.53 - - - - - - 0.779 - 0.751 - WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
7. ID1 ENSGALG00000034661 44524 1.489 - - - - - 0.747 0.742 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
8. C14orf1 C14orf1 14289 1.483 - - - - - - 0.738 0.745 - -
9. DRG1 ENSGALG00000006921 10791 1.481 - - - - - - 0.740 0.741 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
10. CYC CYC 8740 1.481 - - - - - 0.710 0.771 - - -
11. OAF ENSGALG00000006715 12518 1.461 - - - - 0.720 - 0.741 - - - out at first homolog [Source:NCBI gene;Acc:395161]
12. BRP44L BRP44L 30452 1.457 - - - - 0.705 - 0.752 - - -
13. TNNT3 ENSGALG00000006572 1652 1.452 - 0.705 - 0.747 - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
14. EXOC8 ENSGALG00000043280 3596 1.441 - - - - - - 0.704 0.737 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
15. AIF1L ENSGALG00000029834 13866 1.437 - - - - - 0.704 - 0.733 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
16. FYTTD1 ENSGALG00000007581 9341 1.436 - - - - - - 0.725 0.711 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
17. CUL3 ENSGALG00000005108 9571 1.43 - - - - - - 0.718 0.712 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
18. ERP29 ENSGALG00000023510 47100 1.421 - - - - - 0.720 - 0.701 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
19. RSL1D1 ENSGALG00000033690 13638 0.906 - - - - - - 0.906 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
20. NFS1 ENSGALG00000001568 7113 0.897 - - - - - - - 0.897 - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
21. CASK ENSGALG00000042400 8485 0.884 - - - - - - 0.884 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
22. NDUFV2 ENSGALG00000036625 29234 0.879 - - - - - - 0.879 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
23. WDR43 ENSGALG00000032529 12235 0.878 - - - - - - 0.878 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
24. BIRC6 ENSGALG00000010541 7999 0.878 - - - - - - 0.878 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
25. RUVBL1 ENSGALG00000005931 9379 0.876 - - - - - - 0.876 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
26. ZNF593 ENSGALG00000000542 79105 0.874 - - - - - - 0.874 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
27. RNPS1 ENSGALG00000009288 13588 0.872 - - - - - - 0.872 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
28. GLRX3 ENSGALG00000010464 22578 0.871 - - - - - - 0.871 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
29. NUPL1 NUPL1 8197 0.871 - - - - - - 0.871 - - -
30. TMEM167A ENSGALG00000027332 13862 0.869 - - - - - - 0.869 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
31. RANBP1 ENSGALG00000002107 17715 0.866 - - - - - - 0.866 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
32. ASF1A ENSGALG00000014887 11319 0.865 - - - - - - 0.865 - - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
33. FAM98A ENSGALG00000010428 9585 0.864 - - - - - - 0.864 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
34. UTP11L UTP11L 11927 0.863 - - - - - - 0.863 - - -
35. FCF1 ENSGALG00000010275 24928 0.863 - - - - - - 0.863 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
36. TMEM184C ENSGALG00000010019 7856 0.862 - - - - - - 0.862 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
37. MRPL15 ENSGALG00000041086 16820 0.862 - - - - - - 0.862 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
38. PPP1R2 ENSGALG00000029789 11594 0.859 - - - - - - 0.859 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
39. ENSGALG00000017396 ENSGALG00000017396 9028 0.859 - - - - - - 0.859 - - -
40. SNRNP27 ENSGALG00000013883 22212 0.858 - - - - - - 0.858 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
41. EIF3B ENSGALG00000040999 49971 0.858 - - - - - - 0.858 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
42. TFB2M ENSGALG00000010651 4374 0.857 - - - - - - 0.857 - - - transcription factor B2, mitochondrial
43. NUP50 ENSGALG00000014222 11743 0.855 - - - - - - 0.855 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
44. GGA.31975 GGA.31975 8825 0.853 - - - - - - 0.853 - - -
45. LOC776067 ENSGALG00000016808 9164 0.852 - - - - - - 0.852 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
46. NASP ENSGALG00000010255 28423 0.851 - - - - - - 0.851 - - - nuclear autoantigenic sperm protein, transcript variant X3
47. IREB2 ENSGALG00000035462 10659 0.849 - - - - - - 0.849 - - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
48. CLNS1A ENSGALG00000008574 25675 0.849 - - - - - - 0.849 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
49. BMI1 ENSGALG00000041267 6618 0.848 - - - - - - - 0.848 - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
50. SSR3 ENSGALG00000028683 24334 0.847 - - - - - - 0.847 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
51. DKC1 ENSGALG00000005054 30350 0.846 - - - - - - 0.846 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
52. UBE2B ENSGALG00000032664 6069 0.846 - - - - - - 0.846 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
53. KLHDC4 ENSGALG00000037315 9828 0.845 - - - - - - 0.845 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
54. EIF4A2 ENSGALG00000008684 58507 0.845 - - - - - - 0.845 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
55. MADH2 MADH2 13017 0.844 - - - - - - 0.844 - - -
56. HSPA4 ENSGALG00000040882 20966 0.843 - - - - - - 0.843 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
57. TMPO ENSGALG00000011504 14454 0.842 - - - - - - 0.842 - - - thymopoietin [Source:NCBI gene;Acc:417923]
58. RAD21 ENSGALG00000029523 25658 0.842 - - - - - - 0.842 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
59. INCENP ENSGALG00000007537 16617 0.841 - - - - - - 0.841 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
60. LLPH ENSGALG00000019358 20976 0.841 - - - - - - 0.841 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
61. RBBP4 ENSGALG00000003522 72455 0.84 - - - - - - 0.840 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
62. PARP1 ENSGALG00000009228 39433 0.84 - - - - - - 0.840 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
63. CRLS1 ENSGALG00000009214 8652 0.84 - - - - - - 0.840 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
64. YWHAZ ENSGALG00000031387 84985 0.839 - - - - - - 0.839 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
65. CDC23 ENSGALG00000007610 11945 0.839 - - - - - - 0.839 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
66. BSG ENSGALG00000001328 37947 0.839 - - - - - - 0.839 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
67. RABGGTB ENSGALG00000011388 11654 0.838 - - - - - - 0.838 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
68. CASP3 ENSGALG00000010638 11572 0.838 - - - - - - 0.838 - - - caspase 3 [Source:NCBI gene;Acc:395476]
69. NUP54 ENSGALG00000011506 4945 0.838 - - - - - - 0.838 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
70. ANAPC1 ENSGALG00000008254 2519 0.837 - - - - - - 0.837 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
71. MRPL50 ENSGALG00000015543 11649 0.837 - - - - - - 0.837 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
72. BRMS1L ENSGALG00000010093 4964 0.837 - - - - - - 0.837 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
73. TOR1AIP1 ENSGALG00000029238 5843 0.835 - - - - - - 0.835 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
74. XRN2 ENSGALG00000008372 22164 0.834 - - - - - - 0.834 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
75. EGLN1 ENSGALG00000041422 11032 0.834 - - - - - - 0.834 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
76. RAB11A ENSGALG00000007615 9154 0.833 - - - - - - 0.833 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
77. NEK6 ENSGALG00000001118 20333 0.833 - - - - - - 0.833 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
78. PSMD12 ENSGALG00000026225 17473 0.833 - - - - - - 0.833 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
79. DDX46 ENSGALG00000006404 8765 0.832 - - - - - - - 0.832 - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
80. CZH9ORF80 CZH9ORF80 12760 0.832 - - - - - - 0.832 - - -
81. VBP1 VBP1 14482 0.831 - - - - - - 0.831 - - -
82. DDX19B ENSGALG00000039967 49600 0.83 - - - - - - 0.830 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
83. R3HDM1 ENSGALG00000012246 6580 0.83 - - - - - - 0.830 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
84. TFDP1 ENSGALG00000016823 17019 0.83 - - - - - - 0.830 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
85. RTCB ENSGALG00000012611 14360 0.83 - - - - - - 0.830 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
86. DYRK2 ENSGALG00000009901 3141 0.829 - - - - - - 0.829 - - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
87. GSPT1 15580 0.829 - - - - - - 0.829 - - - G1 to S phase transition 1, transcript variant X1
88. DNAL4 ENSGALG00000043451 4469 0.829 - - - - - - 0.829 - - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
89. MRPL20 ENSGALG00000001542 28764 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
90. TXNL1 ENSGALG00000033862 13899 0.828 - - - - - - 0.828 - - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
91. PLRG1 ENSGALG00000009257 8613 0.827 - - - - - - 0.827 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
92. PTTG1 17936 0.827 - - - - - - 0.827 - - - pituitary tumor-transforming 1, transcript variant X1
93. FAM160B1 ENSGALG00000031404 3153 0.827 - - - - - - 0.827 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
94. MCTS1 ENSGALG00000008517 27514 0.826 - - - - - - 0.826 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
95. KIF2C ENSGALG00000010120 8999 0.826 - - - - - - 0.826 - - - kinesin family member 2C, transcript variant X1
96. RPL7L1 ENSGALG00000011974 20292 0.826 - - - - - - 0.826 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
97. GLO1 ENSGALG00000010127 31662 0.826 - - - - - - 0.826 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
98. ENSGALG00000005727 ENSGALG00000005727 4334 0.825 - - - - - - 0.825 - - -
99. RPF2 ENSGALG00000037087 12788 0.825 - - - - - - 0.825 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
100. TERF2 ENSGALG00000000657 7865 0.825 - - - - - - 0.825 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]

There are 754 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA