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Results for LIMD1_1

Gene Name Gene ID Reads Annotation
LIMD1_1 LIMD1_1 348










Genes with expression patterns similar to LIMD1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LIMD1_1 LIMD1_1 348 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. prx ENSDARG00000017246 6183 2.512 0.760 0.845 - - - - 0.907 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
3. usp28 ENSDARG00000008880 1850 2.426 0.773 - - - - - 0.892 0.761 - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
4. myoz2b ENSDARG00000037266 2139 2.387 0.743 - - 0.860 - - 0.784 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
5. C13H10orf71 3489 2.324 0.750 0.702 - - - - 0.872 - - chromosome 13 C10orf71 homolog
6. tnc ENSDARG00000021948, ENSDARG00000113518 12162 2.256 0.744 0.726 - - - - 0.786 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
7. PBX1A ENSDARG00000100494 704 2.25 - 0.786 - - - 0.709 0.755 - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
8. plod2 ENSDARG00000011821 1656 2.204 0.733 0.705 - - - - 0.766 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
9. CABZ01113191.1 CABZ01113191.1 388 2.19 0.770 - - - - - 0.713 0.707 -
10. synpo2b ENSDARG00000077157 1009 1.742 - 0.806 - - - - 0.936 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
11. akap6 ENSDARG00000077295 1382 1.704 0.758 - - - - - 0.946 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
12. zgc:162936 ENSDARG00000069957 95 1.703 - 0.881 - 0.822 - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
13. CR354540.2 ENSDARG00000117517 18452 1.699 0.786 - - - - - 0.913 - -
14. NRAP ENSDARG00000009341 3565 1.697 - 0.789 - - - - 0.908 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
15. smpx ENSDARG00000045302 2175 1.695 0.807 - - - - - 0.888 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
16. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.694 0.790 - - - - - 0.904 - -
17. agla ENSDARG00000103811 2856 1.69 - - - 0.775 - - 0.915 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
18. plxnb1a ENSDARG00000075821 1702 1.686 0.770 - - - - - 0.916 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
19. CABZ01080590.2 CABZ01080590.2 2038 1.675 0.767 - - - - - 0.908 - -
20. wdr90 ENSDARG00000079241 1163 1.666 - 0.757 - - - - 0.909 - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
21. hapln1a ENSDARG00000089769 12334 1.661 0.756 - - - - - 0.905 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
22. myhc4 ENSDARG00000035438 1322 1.657 0.757 - - - - - 0.900 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
23. COL23A1_1 COL23A1_1 720 1.657 0.790 - - - - - 0.867 - -
24. smtnl1 ENSDARG00000041257 7410 1.655 0.782 - - - - - 0.873 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
25. smarcd3a ENSDARG00000038786 2894 1.653 - - - - - 0.720 0.933 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
26. sptb ENSDARG00000030490 7128 1.646 0.766 - - - - - 0.880 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
27. xirp2a ENSDARG00000071113 7113 1.643 0.750 - - - - - 0.893 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
28. ddx55 ENSDARG00000009864 415 1.637 - 0.767 - - - - 0.870 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
29. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.632 - - - 0.785 - - 0.847 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
30. tgfbi ENSDARG00000071586 17779 1.632 0.822 - - - - - 0.810 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
31. tnw 16679 1.629 - 0.711 - - - - 0.918 - - tenascin W, transcript variant X2
32. CABZ01086825.1 CABZ01086825.1 573 1.628 - 0.775 - - - - 0.853 - -
33. ube2d4 ENSDARG00000015057 1089 1.628 0.770 - - - - - 0.858 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
34. DNAJA4 ENSDARG00000051762 5657 1.627 - - - - - - 0.908 0.719 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
35. nexn ENSDARG00000057317 10972 1.625 0.734 - - - - - 0.891 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
36. cthrc1a ENSDARG00000087198 1001 1.625 - 0.819 - - - - 0.806 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
37. MUSTN1 MUSTN1 1882 1.625 - 0.783 - - - - 0.842 - -
38. znf648 ENSDARG00000104823 1918 1.624 0.810 - - - - - 0.814 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
39. rtn2a ENSDARG00000016088 12184 1.622 0.709 - - - - - 0.913 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
40. msrb3 ENSDARG00000045658 988 1.617 - - - 0.791 - - 0.826 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
41. casq1b ENSDARG00000018105 2643 1.616 0.719 - - - - - 0.897 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
42. klc3 ENSDARG00000055965 116 1.615 - 0.832 - - - - 0.783 - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
43. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.613 - - - 0.798 - - 0.815 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
44. slc8a3 ENSDARG00000004931 338 1.611 0.787 - - - - - 0.824 - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
45. trdn ENSDARG00000041779 4283 1.609 0.737 - - - - - 0.872 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
46. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.609 0.803 - - - - - 0.806 - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
47. klhl41b ENSDARG00000006757 10762 1.609 0.706 - - - - - 0.903 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
48. BX530018.3 ENSDARG00000107022 614 1.607 0.705 - - - - - 0.902 - -
49. USP54 USP54 186 1.606 - - - 0.852 - - 0.754 - -
50. kera ENSDARG00000056938 2434 1.605 - 0.889 - 0.716 - - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
51. myhz2 ENSDARG00000012944 69921 1.605 0.724 - - - - - 0.881 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
52. ALDH1L2 ENSDARG00000070230 2550 1.604 0.726 - - - - - 0.878 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
53. ptrfb ptrfb 567 1.604 0.831 0.773 - - - - - - -
54. BX294434.1 ENSDARG00000061272 6493 1.602 - 0.711 - - - - 0.891 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
55. mthfr ENSDARG00000053087 373 1.601 0.746 - - - - - 0.855 - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
56. atp1b3b ENSDARG00000042837 5163 1.6 0.711 - - - - - 0.889 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
57. oep oep 261 1.598 0.714 0.884 - - - - - - -
58. ank2b ENSDARG00000043313 3065 1.598 - 0.750 - - - - 0.848 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
59. tgm2a ENSDARG00000070157 4516 1.596 0.715 - - - - - 0.881 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
60. rtn2b ENSDARG00000057027 1391 1.592 - 0.739 - - - - 0.853 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
61. hspg2 ENSDARG00000076564 3440 1.587 - 0.740 - - - - 0.847 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
62. myf6 ENSDARG00000029830 1911 1.582 - - - - - - 0.879 0.703 - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
63. tcea3 ENSDARG00000004724 674 1.575 0.863 - - - - - - 0.712 - transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]
64. mybpc2b ENSDARG00000021265 9618 1.574 - 0.719 - - - - 0.855 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
65. tns1 tns1 5891 1.572 0.735 - - - - - 0.837 - -
66. CMYA5 ENSDARG00000061379 65 1.566 0.733 0.833 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
67. cacna1sb ENSDARG00000042552 1320 1.565 - - - - - - 0.857 0.708 - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
68. rhoq ENSDARG00000025953 674 1.565 - 0.760 - 0.805 - - - - - ras homolog family member Q [Source:ZFIN;Acc:ZDB-GENE-030131-5721]
69. dyrk4 ENSDARG00000070734 264 1.564 - 0.717 - - - - 0.847 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-091015-3]
70. CU633479.5 ENSDARG00000114818 1815 1.563 0.732 - - - - - 0.831 - -
71. myo18ab ENSDARG00000061862 124 1.559 - 0.714 - 0.845 - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
72. enpp1 ENSDARG00000005789 3267 1.555 0.731 - - - - - 0.824 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
73. si:ch1073-184j22.2 ENSDARG00000078598 707 1.554 - 0.776 - - - - 0.778 - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
74. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.553 - 0.790 - 0.763 - - - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
75. si:dkey-65j6.2 ENSDARG00000103586 533 1.552 - 0.742 - - - - 0.810 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
76. CU633908.1 ENSDARG00000113928 222 1.552 0.818 - - 0.734 - - - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
77. CR450814.3 CR450814.3 608 1.551 0.817 - - - - - 0.734 - -
78. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.543 0.803 0.740 - - - - - - -
79. myha ENSDARG00000095930 143 1.538 - 0.797 - - - - 0.741 - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
80. ccdc80 ENSDARG00000000002 1284 1.538 0.772 - - - - - 0.766 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
81. CR392006.1 CR392006.1 1401 1.538 0.724 - - - - - 0.814 - -
82. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 1.538 - - - - - - 0.819 0.719 - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
83. notum2 ENSDARG00000088411 823 1.536 0.782 0.754 - - - - - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
84. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 1.535 0.786 - - - - - 0.749 - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
85. kif21a ENSDARG00000061131 913 1.532 - 0.785 - - - - 0.747 - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
86. lpl ENSDARG00000087697 2578 1.532 - - - 0.773 - - 0.759 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
87. lama2 ENSDARG00000099390 24734 1.526 0.704 - - - - - 0.822 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
88. BX470254.1 ENSDARG00000097402 1389 1.52 0.703 - - 0.817 - - - - -
89. fam213b ENSDARG00000029795 387 1.512 0.806 - - 0.706 - - - - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
90. zgc:113276 ENSDARG00000056650 218 1.508 - - - - - 0.789 0.719 - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
91. sertad2a ENSDARG00000093412 503 1.503 - - - - - 0.762 0.741 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
92. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.499 0.754 - - - - - 0.745 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
93. pkmb ENSDARG00000099860 25094 1.498 0.751 - - - - - 0.747 - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
94. CBFA2T3 ENSDARG00000079012 6799 1.494 - - - - - 0.701 0.793 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
95. MYOM3 2720 1.492 0.703 - - - - - 0.789 - - myomesin 3, transcript variant X2
96. CABZ01097761.1 ENSDARG00000116119 445 1.489 0.728 - - - - - 0.761 - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
97. rgma ENSDARG00000012248 2238 1.487 - 0.704 - - - 0.783 - - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
98. col9a3 ENSDARG00000037845 6564 1.472 0.765 0.707 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
99. bin1 bin1 3199 1.47 0.724 - - - - - 0.746 - -
100. eaf2 ENSDARG00000010432 3768 1.466 - - - - - 0.713 0.753 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]

There are 1384 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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