Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LIMD1

Gene Name Gene ID Reads Annotation
LIMD1 LIMD1 1306










Genes with expression patterns similar to LIMD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LIMD1 LIMD1 1306 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.96 0.717 0.778 - - - 0.739 0.726 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
3. pdap1b ENSDARG00000002967 2159 2.565 - - 0.907 - - 0.819 0.839 - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
4. anxa6 ENSDARG00000013335 3588 2.443 - - - - - 0.717 0.825 - 0.901 annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
5. smyd2b ENSDARG00000005629 8181 2.416 0.776 0.803 - - - 0.837 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
6. PPFIBP1_2 PPFIBP1_2 1274 2.413 - - - - - 0.726 0.719 - 0.968
7. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.37 - 0.712 - - - 0.872 0.786 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
8. xirp2a ENSDARG00000071113 7113 2.359 0.714 0.887 - - - - 0.758 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
9. nexn ENSDARG00000057317 10972 2.336 0.748 - - - - 0.822 0.766 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
10. smpx ENSDARG00000045302 2175 2.326 0.774 - - - - 0.786 0.766 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
11. myod1 ENSDARG00000030110 6019 2.299 - 0.702 - - - 0.861 0.736 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
12. smtnl1 ENSDARG00000041257 7410 2.283 0.782 - - - - 0.749 0.752 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
13. ITGB1BP2 ENSDARG00000030176 2472 2.281 - 0.733 - - - 0.837 0.711 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
14. tnnt2d ENSDARG00000002988 7590 2.266 0.798 - - - - 0.711 0.757 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
15. cmya5 ENSDARG00000061379 1423 2.263 0.754 - - - - 0.802 0.707 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
16. prx ENSDARG00000017246 6183 2.26 0.800 0.705 - - - - 0.755 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
17. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 2.258 - 0.726 - - - 0.711 0.821 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
18. rp42-pen rp42-pen 3395 2.247 - 0.715 - - - 0.803 0.729 - -
19. ptrfa ptrfa 4363 2.241 0.762 0.741 - - - 0.738 - - -
20. chrna1 ENSDARG00000009021 2931 2.239 - 0.737 - - - 0.794 0.708 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
21. tnnc1b ENSDARG00000037539 13945 2.239 - 0.749 - - - 0.750 0.740 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
22. jph2 ENSDARG00000028625 6706 2.227 0.702 - - - - 0.765 0.760 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
23. txnipb ENSDARG00000070000 2365 2.226 - 0.770 - - - 0.719 0.737 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
24. ntmt1 ENSDARG00000022399 5779 2.211 - 0.755 - - - 0.752 0.704 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
25. PTPLA PTPLA 4044 2.204 - 0.716 - - - 0.755 0.733 - -
26. trdn ENSDARG00000041779 4283 2.202 0.703 0.747 - - - - 0.752 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
27. ryr3 ENSDARG00000071331 6795 2.189 0.703 - - - - 0.702 0.784 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
28. tgm2a ENSDARG00000070157 4516 2.187 0.705 - - - - 0.749 0.733 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
29. gypc ENSDARG00000041546 1487 2.183 - 0.741 - - - 0.734 0.708 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
30. MYOT ENSDARG00000076312 1791 2.158 - 0.707 - - - 0.715 0.736 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
31. wnt10a ENSDARG00000017155 491 1.943 - - 0.984 - - - - - 0.959 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
32. AIFM2 ENSDARG00000077549 1419 1.927 - - 0.974 - - - - - 0.953 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
33. dctn3 ENSDARG00000041363 3351 1.909 - - 0.975 - - - - - 0.934 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
34. CABZ01113191.1 CABZ01113191.1 388 1.901 - - - - - - 0.944 - 0.957
35. rarga ENSDARG00000034117 1238 1.869 - - 0.964 - - - - - 0.905 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
36. ppp1r14c ENSDARG00000077341 1587 1.77 - 0.784 0.986 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
37. brd7 ENSDARG00000008380 3654 1.769 - 0.806 0.963 - - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
38. hint3 ENSDARG00000074286 1015 1.765 - 0.782 0.983 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
39. SH3GLB1 SH3GLB1 2274 1.74 - 0.773 0.967 - - - - - -
40. ppp2r5eb ENSDARG00000069118 1902 1.73 - - - - - - 0.804 - 0.926 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
41. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.725 - - 0.978 - - - - 0.747 - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
42. pdzk1 ENSDARG00000022261 398 1.719 - 0.748 - - - - - - 0.971 PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
43. lpl ENSDARG00000087697 2578 1.707 - - - - - 0.862 0.845 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
44. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 1.704 - 0.739 - - - - - - 0.965 acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
45. gins1 ENSDARG00000007624 1421 1.703 - 0.737 - - - - - - 0.966 GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
46. CCDC86 CCDC86 2023 1.69 - 0.725 0.965 - - - - - -
47. mrps33 ENSDARG00000020015 3551 1.688 - - 0.966 - - 0.722 - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
48. ecsit ENSDARG00000062834 896 1.688 - 0.750 - - - - - - 0.938 ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
49. TRAPPC10 ENSDARG00000098118 954 1.671 - - - - - 0.713 - - 0.958 trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
50. mrps23 ENSDARG00000033973 2265 1.667 - - 0.962 - - - 0.705 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
51. si:ch211-242b18.1 ENSDARG00000054723 2929 1.663 - 0.730 - - - - 0.933 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
52. uck2b ENSDARG00000022213 1542 1.66 - - - - - 0.718 - - 0.942 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
53. kdelr2a ENSDARG00000005254 13871 1.654 - - 0.950 - - - - - 0.704 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
54. wnk1b ENSDARG00000039392 3587 1.653 - 0.739 - - - - - - 0.914 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
55. ARHGEF15 ENSDARG00000100293 553 1.649 - - - - - - - 0.708 0.941 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
56. kras ENSDARG00000010844 2885 1.647 - - 0.936 - - 0.711 - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
57. qars ENSDARG00000010316 2715 1.637 - 0.711 - - - - - - 0.926 glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
58. ntd5 ENSDARG00000040944 4988 1.627 - - 0.915 - - - 0.712 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
59. tgm1l1 ENSDARG00000102106 1437 1.618 - 0.780 - - - 0.838 - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
60. myom1a ENSDARG00000061249 10230 1.613 - - - - - 0.839 0.774 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
61. ppapdc3 ppapdc3 4924 1.613 - - - - - 0.854 0.759 - -
62. mef2aa ENSDARG00000031756 2699 1.607 - 0.786 - - - - 0.821 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
63. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.605 0.789 0.816 - - - - - - -
64. atp1b3b ENSDARG00000042837 5163 1.604 - - - - - 0.835 0.769 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
65. nid1a ENSDARG00000068710 3948 1.604 - - - - - 0.833 0.771 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
66. EIF4G1_1 EIF4G1_1 3721 1.602 - 0.720 - - - - - - 0.882
67. cct8 ENSDARG00000008243 6843 1.599 - - 0.890 - - - 0.709 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
68. PBLD_1 PBLD_1 585 1.597 - - - - - 0.826 0.771 - -
69. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.594 0.783 - - - - 0.811 - - -
70. rassf8b ENSDARG00000045485 1568 1.594 0.702 - - - - - - - 0.892 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
71. slc16a3 ENSDARG00000045051 818 1.592 - - - - - 0.856 0.736 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
72. tmem182 tmem182 12589 1.59 - - - - - 0.814 0.776 - -
73. CR847973.1 ENSDARG00000115516 8754 1.586 - - - - - 0.820 0.766 - -
74. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.583 - - - - - 0.863 0.720 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
75. C13H10orf71 3489 1.582 - 0.816 - - - - 0.766 - - chromosome 13 C10orf71 homolog
76. ndufv1 ENSDARG00000036438 8437 1.581 - - - - - 0.745 - - 0.836 NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
77. adss ENSDARG00000002071 5497 1.578 0.794 - - - - - 0.784 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
78. capzb ENSDARG00000100252 10444 1.577 - - - - - 0.799 - - 0.778 capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
79. plecb ENSDARG00000021987 13621 1.572 0.780 0.792 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
80. dhrs7c dhrs7c 1173 1.572 - - - - - 0.802 0.770 - -
81. taf10 ENSDARG00000068641 3333 1.566 - - - - - - 0.710 - 0.856 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
82. srl ENSDARG00000104587 11126 1.565 - 0.789 - - - - 0.776 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
83. tmem242 ENSDARG00000037070 1081 1.564 0.738 0.826 - - - - - - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
84. FRMD5_1 ENSDARG00000075942 883 1.561 - 0.709 - - - - 0.852 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
85. ryr1b ENSDARG00000023797 5693 1.56 - 0.785 - - - - 0.775 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
86. PTP4A3 ENSDARG00000039997 3814 1.559 - 0.794 - - - 0.765 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
87. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.558 - - - - - 0.796 0.762 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
88. ruvbl1 ENSDARG00000002591 2381 1.556 - 0.720 - - - - - - 0.836 RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
89. usp2a ENSDARG00000020107 2586 1.555 - - - - - 0.776 0.779 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
90. pmp22b ENSDARG00000060457 20406 1.554 - - 0.786 - - - 0.768 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
91. tnw 16679 1.554 - 0.773 - - - - 0.781 - - tenascin W, transcript variant X2
92. ndufs1 ENSDARG00000028546 5795 1.547 - - - - - - 0.824 - 0.723 NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
93. KRTCAP2 ENSDARG00000070386 10103 1.547 - - 0.827 - - - - - 0.720 keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
94. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.546 0.724 - - - - - 0.822 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
95. mtdhb ENSDARG00000004939 1225 1.545 - - - - - 0.721 0.824 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
96. kbtbd12 ENSDARG00000001882 1196 1.544 - - - - - 0.762 0.782 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
97. pygmb ENSDARG00000013317 5454 1.544 - 0.756 - - - - 0.788 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
98. akap6 ENSDARG00000077295 1382 1.541 0.796 - - - - - 0.745 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
99. MYOM1 MYOM1 3870 1.539 - 0.809 - - - - 0.730 - -
100. calm1b ENSDARG00000034187 13158 1.539 - - - - - 0.715 - - 0.824 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]

There are 1326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA