Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIMCH1

Gene Name Gene ID Reads Annotation
LIMCH1 ENSGALG00000014258 1987 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]











Genes with expression patterns similar to LIMCH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIMCH1 ENSGALG00000014258 1987 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
2. NCAPG2 ENSGALG00000006525 2319 1.884 - - - - - - 0.887 0.997 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
3. ACTA1 ENSGALG00000011086 2543 1.807 - - 0.809 - - - - 0.998 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
4. MAB21L1 ENSGALG00000045052 1677 1.766 - - - - - - - 0.921 - 0.845 mab-21 like 1 [Source:NCBI gene;Acc:395208]
5. TLCD2 ENSGALG00000021592 1166 1.735 - - - - - - 0.737 0.998 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
6. COPS2 ENSGALG00000000404 8980 1.703 - - - - - - 0.740 0.963 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
7. NAP1L1 ENSGALG00000010238 14506 1.703 - - - - - - 0.712 0.991 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
8. SMOC1 ENSGALG00000009415 2403 1.557 - - - - - - 0.760 - 0.797 - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
9. PMP22 ENSGALG00000031425 5358 1.551 - - 0.740 - - - - - 0.811 - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
10. PEX16 ENSGALG00000008421 3684 1.541 - - - - - - 0.815 - - 0.726 peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
11. ACTN2 ENSGALG00000014463 1724 1.526 - - 0.798 - - - - - 0.728 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
12. SPON1 ENSGALG00000038775 16503 1.521 - - 0.762 - - - - - 0.759 - spondin 1 [Source:NCBI gene;Acc:395657]
13. EVI5 4722 1.474 - - - - - - - 0.707 - 0.767 ecotropic viral integration site 5, transcript variant X1
14. CNTRL ENSGALG00000001513 1773 0.998 - - - - - - - 0.998 - - centriolin [Source:NCBI gene;Acc:417121]
15. NQO2 ENSGALG00000025747 2287 0.998 - - - - - - - 0.998 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
16. SETD9 ENSGALG00000014719 5081 0.997 - - - - - - - 0.997 - - SET domain containing 9, transcript variant X2
17. QSOX2 ENSGALG00000001758 638 0.997 - - - - - - - 0.997 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
18. CENPJ ENSGALG00000017148 1415 0.997 - - - - - - - 0.997 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
19. RNF19B ENSGALG00000039716 662 0.997 - - - - - - - 0.997 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
20. BYSL ENSGALG00000003467 7555 0.997 - - - - - - - 0.997 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
21. REPS2 ENSGALG00000016545 3347 0.997 - - - - - - - 0.997 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
22. TUBD1 ENSGALG00000005173 1364 0.997 - - - - - - - 0.997 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
23. ZNF318 ENSGALG00000034040 1758 0.997 - - - - - - - 0.997 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
24. LAMA5 486 0.997 - - - - - - - 0.997 - - laminin subunit alpha 5, transcript variant X3
25. STX8 ENSGALG00000001238 7403 0.996 - - - - - - - 0.996 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
26. VPRBP VPRBP 4037 0.996 - - - - - - - 0.996 - -
27. RPAIN ENSGALG00000001666 2676 0.996 - - - - - - - 0.996 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
28. ANKRD46 ENSGALG00000041445 3791 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 46, transcript variant X1
29. AKAP2 ENSGALG00000015656 4310 0.995 - - - - - - - 0.995 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
30. GTF2H3 ENSGALG00000023682 9914 0.995 - - - - - - - 0.995 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
31. AMACR ENSGALG00000003326 2657 0.995 - - - - - - - 0.995 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
32. SGCB ENSGALG00000013968 3214 0.995 - - - - - - - 0.995 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
33. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.995 - - - - - - - 0.995 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
34. EDNRA ENSGALG00000010013 2472 0.994 - - - - - - - 0.994 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
35. TAPA1 TAPA1 8669 0.994 - - - - - - - 0.994 - -
36. FRAS1 ENSGALG00000010316 5008 0.993 - - - - - - - 0.993 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
37. GTF2A1 ENSGALG00000010576 4570 0.993 - - - - - - - 0.993 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
38. ERBB2IP ERBB2IP 5800 0.992 - - - - - - - 0.992 - -
39. EVX1 ENSGALG00000037310 1974 0.992 - - - - - - - 0.992 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
40. WDHD1 ENSGALG00000012199 3570 0.991 - - - - - - - 0.991 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
41. MON2 ENSGALG00000009795 3868 0.99 - - - - - - - 0.990 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
42. GPR27 ENSGALG00000027091 8111 0.99 - - - - - - - 0.990 - - G protein-coupled receptor 27
43. SUPV3L1 ENSGALG00000004197 4141 0.989 - - - - - - - 0.989 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
44. BMS1 ENSGALG00000002624 8339 0.989 - - - - - - - 0.989 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
45. GNG2 ENSGALG00000027629 9404 0.988 - - - - - - - 0.988 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
46. ACSF2 ENSGALG00000019768 2727 0.986 - - - - - - - 0.986 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
47. MRPS35 ENSGALG00000036730 6327 0.986 - - - - - - - 0.986 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
48. SOS1 ENSGALG00000039450 3941 0.984 - - - - - - - 0.984 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
49. AMD1 ENSGALG00000039575 8900 0.982 - - - - - - - 0.982 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
50. MRE11A MRE11A 5754 0.978 - - - - - - - 0.978 - -
51. MRPS11 ENSGALG00000006777 16009 0.977 - - - - - - - 0.977 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
52. SERPINE2 ENSGALG00000005135 16108 0.976 - - - - - - - 0.976 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
53. AP1B1 ENSGALG00000042213 4828 0.974 - - - - - - - 0.974 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
54. IST1 ENSGALG00000000811 10527 0.971 - - - - - - - 0.971 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
55. CTNNA1 ENSGALG00000002447 22379 0.965 - - - - - - - 0.965 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
56. RAD23B ENSGALG00000015540 10828 0.958 - - - - - - - 0.958 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
57. ACE ENSGALG00000000498 1398 0.948 - - - - - - - 0.948 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
58. C9orf78 ENSGALG00000004152 7140 0.946 - - - - - - - 0.946 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
59. MPHOSPH8 ENSGALG00000017145 6280 0.943 - - - - - - - 0.943 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
60. HNRNPH1 HNRNPH1 8819 0.931 - - - - - - - 0.931 - -
61. ANKRD10 ENSGALG00000030125 3611 0.93 - - - - - - - 0.930 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
62. PSPC1 ENSGALG00000017142 13036 0.928 - - - - - - - 0.928 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
63. MST1 ENSGALG00000002722 994 0.921 - - - - - - 0.921 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
64. SNX9 ENSGALG00000013710 5295 0.917 - - - - - - - 0.917 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
65. MND1 ENSGALG00000009212 11765 0.913 - - - - - - - 0.913 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
66. C14orf80 C14orf80 1921 0.912 - - - - - - 0.912 - - -
67. Sep-05 Sep-05 5887 0.91 - - - - - - - 0.910 - -
68. MOXD1 ENSGALG00000002911 8523 0.909 - - - - - - - 0.909 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
69. NHP2L1 NHP2L1 12124 0.908 - - - - - - - 0.908 - -
70. MBNL3 ENSGALG00000032045 10980 0.908 - - - - - - - 0.908 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
71. EXOSC3 ENSGALG00000002426 7255 0.906 - - - - - - - 0.906 - - exosome component 3 [Source:NCBI gene;Acc:423626]
72. ENSGALG00000014852 ENSGALG00000014852 15288 0.901 - - - - - - - 0.901 - -
73. JMJD7 ENSGALG00000026846 1320 0.897 - - - - - - 0.897 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
74. CDC42SE2 ENSGALG00000027258 4725 0.897 - - - - - - 0.897 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
75. UPK3BL ENSGALG00000001885 1650 0.896 - - - - - - 0.896 - - - uroplakin 3B-like
76. PALD1 ENSGALG00000004465 3553 0.895 - - - - - - 0.895 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
77. HESX1 ENSGALG00000005506 203 0.894 - - - - - - 0.894 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
78. SLC25A21 ENSGALG00000010117 536 0.894 - - - - - - 0.894 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
79. POLE3 ENSGALG00000008873 9161 0.893 - - - - - - - 0.893 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
80. ENTPD8L ENSGALG00000008936 731 0.891 - - - - - - 0.891 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
81. TM9SF4 ENSGALG00000006568 567 0.891 - - - - - - 0.891 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
82. ATM ENSGALG00000017159 893 0.891 - - - - - - 0.891 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
83. PSMC3 ENSGALG00000008108 22922 0.889 - - - - - - - 0.889 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
84. ENSGALG00000028164 ENSGALG00000028164 3325 0.889 - - - - - - 0.889 - - -
85. NUP205 ENSGALG00000011662 4157 0.889 - - - - - - 0.889 - - - nucleoporin 205
86. SUGP1 ENSGALG00000042132 2771 0.888 - - - - - - 0.888 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
87. XPO7 ENSGALG00000001838 1875 0.888 - - - - - - 0.888 - - - exportin 7 [Source:NCBI gene;Acc:426925]
88. DNAJC16 ENSGALG00000032832 750 0.888 - - - - - - 0.888 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
89. GPI ENSGALG00000004956 40030 0.888 - - - - - - - 0.888 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
90. SGSM3 ENSGALG00000012033 1839 0.888 - - - - - - 0.888 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
91. UBE2V2 ENSGALG00000028133 7044 0.888 - - - - - - 0.888 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
92. MESDC1 1013 0.885 - - - - - - 0.885 - - - mesoderm development candidate 1
93. ASB6 ENSGALG00000004378 1080 0.885 - - - - - - 0.885 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
94. DDX18 ENSGALG00000012147 12463 0.884 - - - - - - - 0.884 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
95. RPS19BP1 ENSGALG00000029810 5768 0.884 - - - - - - 0.884 - - - ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
96. SCAF4 ENSGALG00000033965 2027 0.884 - - - - - - 0.884 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
97. DIEXF ENSGALG00000009887 4782 0.883 - - - - - - 0.883 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
98. WDSUB1 ENSGALG00000012574 2038 0.882 - - - - - - 0.882 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
99. NSRP1 ENSGALG00000004186 1683 0.882 - - - - - - 0.882 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
100. FAM57A ENSGALG00000004820 1492 0.881 - - - - - - 0.881 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]

There are 362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA