Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIG4

Gene Name Gene ID Reads Annotation
LIG4 ENSGALG00000016854 162 DNA ligase 4 [Source:NCBI gene;Acc:418764]











Genes with expression patterns similar to LIG4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIG4 ENSGALG00000016854 162 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA ligase 4 [Source:NCBI gene;Acc:418764]
2. FAM65C 36 0.777 - - - - 0.777 - - - - - family with sequence similarity 65 member C, transcript variant X29
3. ATXN7L1 ENSGALG00000008115 84 0.775 - - - - 0.775 - - - - - ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
4. TMED6 ENSGALG00000000654 8 0.774 - - - - 0.774 - - - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
5. KCTD14 ENSGALG00000017266 31 0.774 - - - - 0.774 - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
6. DCBLD1 ENSGALG00000014907 19 0.774 - - - - 0.774 - - - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
7. AK4 ENSGALG00000011035 9 0.774 - - - - 0.774 - - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
8. LOC416263 ENSGALG00000004078 3 0.77 - - - - - - - 0.770 - - LON peptidase N-terminal domain and RING finger protein 2-like
9. MYO18A ENSGALG00000003741 1023 0.77 - - - - - - - 0.770 - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
10. FAM83H ENSGALG00000033118 50 0.76 - - - - 0.760 - - - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
11. LIMS2 ENSGALG00000001995 41 0.756 - - - - 0.756 - - - - - LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
12. NMU ENSGALG00000020151 29 0.755 - - - - 0.755 - - - - - neuromedin U [Source:NCBI gene;Acc:422748]
13. C5 ENSGALG00000001565 142 0.753 - - - - 0.753 - - - - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
14. PUS7 ENSGALG00000008132 531 0.751 - - - - 0.751 - - - - - pseudouridylate synthase 7 [Source:NCBI gene;Acc:417709]
15. TMEM242 ENSGALG00000013689 377 0.741 - - - - 0.741 - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
16. FCHO1 FCHO1 149 0.74 - - - - 0.740 - - - - -
17. MYH7B ENSGALG00000030985 199 0.739 - - - - 0.739 - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
18. DISP3 ENSGALG00000004662 146 0.737 - - - - 0.737 - - - - - dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
19. CX3CR1 ENSGALG00000038000 48 0.735 - - - - - 0.735 - - - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
20. RAP1GAP2 ENSGALG00000033885 98 0.734 - - - - - - - 0.734 - - RAP1 GTPase activating protein 2 [Source:NCBI gene;Acc:427841]
21. SCN5A ENSGALG00000006112 137 0.731 - - - - 0.731 - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
22. VPS45 ENSGALG00000013899 154 0.73 - - - - - - - 0.730 - - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
23. EBF1 ENSGALG00000003699 23 0.727 - - - - - 0.727 - - - - early B-cell factor 1 [Source:NCBI gene;Acc:395512]
24. SGK2 ENSGALG00000003537 26 0.723 - - - - - 0.723 - - - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
25. NOG ENSGALG00000003114 12 0.721 - - - - - 0.721 - - - - noggin [Source:NCBI gene;Acc:373912]
26. DYNLRB2 ENSGALG00000005402 630 0.721 - - - - 0.721 - - - - - dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]
27. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.72 - - - - - - - 0.720 - - homer scaffolding protein 3, transcript variant X4
28. METTL15 ENSGALG00000012153 233 0.717 - - - - 0.717 - - - - - methyltransferase like 15 [Source:NCBI gene;Acc:421606]
29. RACGAP1L ENSGALG00000011252 664 0.711 - - - - - - - 0.711 - - rac GTPase-activating protein 1-like
30. KIAA0040 ENSGALG00000030543 53 0.71 - - - - 0.710 - - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
31. MKNK1 ENSGALG00000010440 196 0.707 - - - - 0.707 - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
32. LRFN2 ENSGALG00000010050 28 0.706 - - - - - - - 0.706 - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
33. KIAA1919 KIAA1919 58 0.701 - - - - 0.701 - - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA