Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LIFR

Gene Name Gene ID Reads Annotation
LIFR ENSGALG00000003733 4391 leukemia inhibitory factor receptor alpha [Source:NCBI gene;Acc:395262]











Genes with expression patterns similar to LIFR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LIFR ENSGALG00000003733 4391 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leukemia inhibitory factor receptor alpha [Source:NCBI gene;Acc:395262]
2. PTX3 ENSGALG00000028284 2984 1.633 - - - - - - 0.750 0.883 - - pentraxin 3 [Source:NCBI gene;Acc:548626]
3. RASA3 ENSGALG00000016817 2146 1.444 - - - - - - 0.725 0.719 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
4. COL6A3 ENSGALG00000003923 3400 0.856 - - - - - - - 0.856 - - collagen type VI alpha 3 chain [Source:NCBI gene;Acc:396548]
5. DPYSL3 ENSGALG00000007582 7743 0.854 - - - - - - - 0.854 - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
6. STRN ENSGALG00000010580 7561 0.839 - - - - - - 0.839 - - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
7. UPF1 ENSGALG00000003220 9496 0.834 - - - - - - - 0.834 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
8. CRTAP ENSGALG00000034163 6453 0.83 - - - - - - - 0.830 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
9. CLMP ENSGALG00000006507 8079 0.826 - - - - - - - 0.826 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
10. ITPK1 ENSGALG00000034898 4212 0.82 - - - - - - - 0.820 - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
11. TSPAN12 ENSGALG00000009029 2145 0.815 - - - - - - - 0.815 - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
12. ACPL2 ACPL2 4670 0.812 - - - - - - 0.812 - - -
13. CPT2 ENSGALG00000010681 3211 0.811 - - - - - - - 0.811 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
14. TTC8 ENSGALG00000010663 1556 0.809 - - - - - - - 0.809 - - tetratricopeptide repeat domain 8 [Source:HGNC Symbol;Acc:HGNC:20087]
15. STOML2 STOML2 15566 0.8 - - - - - - - 0.800 - -
16. NPNT ENSGALG00000043555 3002 0.799 - - - - - - - 0.799 - - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
17. MYOCD ENSGALG00000001021 351 0.798 - - - - - - - 0.798 - - myocardin [Source:NCBI gene;Acc:427790]
18. PCNT ENSGALG00000007021 6428 0.796 - - - - - - 0.796 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
19. HIC2 ENSGALG00000033416 4051 0.793 - - - - - - 0.793 - - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
20. ACBD5 ENSGALG00000007519 1646 0.792 - - - - - - - 0.792 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
21. PDLIM7 ENSGALG00000026159 4700 0.792 - - - - - - - 0.792 - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
22. DECR1 ENSGALG00000036990 6360 0.792 - - - - - - - 0.792 - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
23. BRT-1 BRT-1 26083 0.791 - - - - - - - 0.791 - -
24. IBTK ENSGALG00000015864 3154 0.786 - - - - - - - 0.786 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
25. PLEKHH2 ENSGALG00000009947 6384 0.781 - - - - - - - 0.781 - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
26. ALAS1 3660 0.778 - - - - - - - 0.778 - - 5'-aminolevulinate synthase 1, transcript variant X1
27. PTPRK ENSGALG00000037423 3688 0.778 - - - - - - - 0.778 - - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
28. PHF2 ENSGALG00000039208 2003 0.774 - - - - - - - 0.774 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
29. SRF ENSGALG00000032029 6983 0.773 - - - - - - - 0.773 - - serum response factor [Source:NCBI gene;Acc:396103]
30. GPD1L ENSGALG00000011481 4224 0.772 - - - - - - - 0.772 - - glycerol-3-phosphate dehydrogenase 1 like [Source:HGNC Symbol;Acc:HGNC:28956]
31. PLDN PLDN 1803 0.771 - - - - - - - 0.771 - -
32. GTPBP4 ENSGALG00000006703 16183 0.771 - - - - - - - 0.771 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
33. TNFRSF1B ENSGALG00000034213 780 0.771 - - - - - - - 0.771 - - TNF receptor superfamily member 1B [Source:NCBI gene;Acc:395083]
34. SALL4 ENSGALG00000041365 6760 0.771 - - - - - - 0.771 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
35. DERL1 ENSGALG00000033950 15074 0.771 - - - - - - 0.771 - - - derlin 1 [Source:NCBI gene;Acc:420350]
36. ZRANB1 ENSGALG00000031474 3909 0.77 - - - - - - 0.770 - - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
37. FBXL17 ENSGALG00000000276 2443 0.769 - - - - - - - 0.769 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
38. USP34 ENSGALG00000004455 6667 0.767 - - - - - - - 0.767 - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
39. FKBP15 ENSGALG00000008838 3677 0.766 - - - - - - 0.766 - - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
40. SACS ENSGALG00000017120 4906 0.765 - - - - - - 0.765 - - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
41. SNX12 ENSGALG00000005659 9503 0.764 - - - - - - - 0.764 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
42. RSRC1 ENSGALG00000009669 5829 0.763 - - - - - - 0.763 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
43. AIP ENSGALG00000040247 4166 0.762 - - - - - - - 0.762 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
44. PXDN ENSGALG00000016377 4255 0.761 - - - - - - 0.761 - - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
45. FAM214A ENSGALG00000042839 3378 0.76 - - - - - - 0.760 - - - family with sequence similarity 214 member A [Source:NCBI gene;Acc:415416]
46. NBEA 1982 0.76 - - - - - - - 0.760 - - neurobeachin, transcript variant X10
47. RRP1B ENSGALG00000035696 12309 0.757 - - - - - - 0.757 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
48. CKAP5 ENSGALG00000008325 8494 0.751 - - - - - - 0.751 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
49. VPS13D ENSGALG00000034777 2350 0.75 - - - - - - - 0.750 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
50. HYAL1 ENSGALG00000000785 1778 0.747 - - - - - - - 0.747 - - hyaluronoglucosaminidase 1, transcript variant X3
51. TRAF7 ENSGALG00000005767 4615 0.747 - - - - - - 0.747 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
52. ENSGALG00000021439 ENSGALG00000021439 628 0.746 - - - - - - - 0.746 - -
53. SH3GLB1 ENSGALG00000006284 12764 0.743 - - - - - - 0.743 - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
54. LOC112529965 ENSGALG00000010758 5395 0.743 - - - - - - - 0.743 - - NADH-cytochrome b5 reductase-like
55. RNH1 ENSGALG00000006904 14542 0.743 - - - - - - - 0.743 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
56. TTC38 ENSGALG00000014551 1135 0.742 - - - - - - - 0.742 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
57. SUCLG2 ENSGALG00000007652 9688 0.741 - - - - - - 0.741 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
58. PDLIM5 ENSGALG00000012211 3064 0.741 - - - - - - - 0.741 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
59. RCAN3 ENSGALG00000004282 7778 0.74 - - - - - - - 0.740 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
60. IGBP1 ENSGALG00000044628 9200 0.739 - - - - - - - 0.739 - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
61. FNBP1L ENSGALG00000005850 9219 0.739 - - - - - - 0.739 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
62. DHODH ENSGALG00000000802 3226 0.739 - - - - - - - 0.739 - - dihydroorotate dehydrogenase (quinone) [Source:NCBI gene;Acc:415876]
63. IL1RL1 ENSGALG00000016785 928 0.738 - - - - - - - 0.738 - - interleukin 1 receptor like 1 [Source:NCBI gene;Acc:374136]
64. PTGES2 ENSGALG00000033760 11255 0.736 - - - - - - 0.736 - - - prostaglandin E synthase 2
65. FBXO7 ENSGALG00000012569 4124 0.736 - - - - - - - 0.736 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
66. MBNL3 ENSGALG00000032045 10980 0.735 - - - - - - 0.735 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
67. ITFG2 ENSGALG00000014335 1896 0.735 - - - - - - - 0.735 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
68. SH3TC1 ENSGALG00000015568 484 0.735 - - - - - - - 0.735 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
69. PLOD1 ENSGALG00000004531 8256 0.734 - - - - - - - 0.734 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
70. BET1L ENSGALG00000004172 5305 0.734 - - - - - - - 0.734 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
71. RABGGTB ENSGALG00000011388 11654 0.734 - - - - - - 0.734 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
72. SLC39A9 ENSGALG00000009438 4838 0.731 - - - - - - - 0.731 - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
73. GNG12 ENSGALG00000026591 5817 0.731 - - - - - - - 0.731 - - G protein subunit gamma 12, transcript variant X21
74. PRPF40A ENSGALG00000012526 7724 0.731 - - - - - - - 0.731 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
75. LBP ENSGALG00000006756 1684 0.73 - - - - - - - 0.730 - - lipopolysaccharide binding protein, transcript variant X1
76. CIB1 ENSGALG00000008302 13946 0.73 - - - - - - 0.730 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
77. C1H11ORF54 ENSGALG00000017219 2066 0.73 - - - - - - - - 0.730 - chromosome 1 open reading frame, human C11orf54 [Source:NCBI gene;Acc:419001]
78. CAMK2G ENSGALG00000005088 5037 0.73 - - - - - - 0.730 - - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
79. MED14 ENSGALG00000016238 4685 0.729 - - - - - - 0.729 - - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
80. TTC37 ENSGALG00000014670 5715 0.728 - - - - - - 0.728 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
81. ATP6V0A2 ENSGALG00000003194 4824 0.727 - - - - - - - 0.727 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
82. LAPTM4A ENSGALG00000016479 15973 0.727 - - - - - - 0.727 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
83. SLC25A20 ENSGALG00000028227 7685 0.727 - - - - - - 0.727 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
84. MMP15 ENSGALG00000038758 49988 0.724 - - - - - - - 0.724 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
85. TBC1D7 ENSGALG00000012731 4891 0.724 - - - - - - - 0.724 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
86. UBN1 ENSGALG00000031416 2848 0.721 - - - - - - - 0.721 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
87. SELENBP1 ENSGALG00000000866 1253 0.721 - - - - - - - 0.721 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
88. ACSS2 ENSGALG00000003362 3023 0.721 - - - - - - - 0.721 - - acyl-CoA synthetase short chain family member 2 [Source:HGNC Symbol;Acc:HGNC:15814]
89. TOB2 ENSGALG00000011957 2881 0.721 - - - - - - 0.721 - - - transducer of ERBB2, 2 [Source:NCBI gene;Acc:417992]
90. MED27 ENSGALG00000003683 6808 0.72 - - - - - - - 0.720 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
91. NOP58 ENSGALG00000008454 34630 0.719 - - - - - - 0.719 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
92. GMPPB ENSGALG00000002500 9454 0.719 - - - - - - 0.719 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
93. HCCS ENSGALG00000005571 4939 0.719 - - - - - - 0.719 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
94. MRPL38 ENSGALG00000002194 6648 0.719 - - - - - - 0.719 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
95. LEPROT ENSGALG00000011047 7132 0.718 - - - - - - - 0.718 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
96. LIMS1 ENSGALG00000029970 7244 0.718 - - - - - - - 0.718 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
97. MTSS1 ENSGALG00000041969 1312 0.718 - - - - - - 0.718 - - - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
98. C1H12ORF23 C1H12ORF23 13234 0.717 - - - - - - 0.717 - - -
99. SMG8 ENSGALG00000005093 5557 0.717 - - - - - - - 0.717 - - SMG8 nonsense mediated mRNA decay factor
100. CDYL ENSGALG00000012808 1238 0.717 - - - - - - 0.717 - - - chromodomain Y-like, transcript variant X1

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA