Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LHX8

Gene Name Gene ID Reads Annotation
LHX8 ENSGALG00000011369 77 LIM homeobox 8 [Source:NCBI gene;Acc:424721]











Genes with expression patterns similar to LHX8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LHX8 ENSGALG00000011369 77 5 - - 1.000 1.000 1.000 - 1.000 1.000 - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
2. TEC ENSGALG00000014124 70 1.442 - - - - - - 0.725 0.717 - - tec protein tyrosine kinase [Source:NCBI gene;Acc:396407]
3. ENSGALG00000027367 ENSGALG00000027367 7 1 - - - - - - 1.000 - - -
4. TRIM25 ENSGALG00000003144 12 1 - - - - - - 1.000 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
5. ST8SIA6 ENSGALG00000008671 8 1 - - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
6. VRK2 ENSGALG00000032770 117 1 - - - - - - 1.000 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
7. ZBTB11 ENSGALG00000015334 22 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
8. FGD4 ENSGALG00000012932 50 1 - - - - - - 1.000 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
9. LOC427545 ENSGALG00000004428 3 1 - - - - - - 1.000 - - - histamine H3 receptor-like
10. KCNV1 ENSGALG00000031449 64 1 - - - - - - 1.000 - - - potassium voltage-gated channel modifier subfamily V member 1
11. DIRAS2 ENSGALG00000005323 11 1 - - - - - - 1.000 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
12. GLRA2 ENSGALG00000016571 10 1 - - - - - - 1.000 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
13. PLA2G1BL ENSGALG00000007236 4 1 - - - - - - 1.000 - - - phospholipase A2, major isoenzyme-like
14. ADAM23 ENSGALG00000008582 28 1 - - - - - - 1.000 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
15. FGA ENSGALG00000009266 291 1 - - - - - - 1.000 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
16. MMP13 ENSGALG00000017183 7 1 - - - - - - 1.000 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
17. POLR1A ENSGALG00000038160 236 1 - - - - - - 1.000 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
18. SPERT ENSGALG00000016981 145 1 - - - - - - 1.000 - - - spermatid associated [Source:NCBI gene;Acc:418848]
19. EGR4 ENSGALG00000016086 4 1 - - - - - - 1.000 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
20. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - 1.000 - - -
21. RD RD 99 1 - - - - - - 1.000 - - -
22. COL4A3BP ENSGALG00000014952 96 1 - - - - - - 1.000 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
23. FOXP1 127 1 - - - - - - 1.000 - - - forkhead box P1, transcript variant X14
24. CBLN4 ENSGALG00000030821 9 1 - - - - - - 1.000 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
25. HPS3 ENSGALG00000040089 44 1 - - - - - - 1.000 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
26. FGF13 ENSGALG00000006508 8 1 - - - - - - 1.000 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
27. SNORD79 SNORD79 12 1 - - - - - - 1.000 - - -
28. LZTS2 ENSGALG00000023612 9 1 - - - - - - 1.000 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
29. P2RY13 ENSGALG00000039432 16 1 - - - - - - 1.000 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
30. PLXNC1 ENSGALG00000011309 69 0.928 - - - - - - 0.928 - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
31. CHST3 ENSGALG00000024056 308 0.926 - - - - - - 0.926 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
32. ITGA4 ENSGALG00000041577 109 0.92 - - - - - - - 0.920 - - integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]
33. TBC1D2B ENSGALG00000003322 54 0.898 - - - - - - 0.898 - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
34. DMXL1 ENSGALG00000002227 88 0.89 - - - - - - 0.890 - - - Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
35. OVCH2 ENSGALG00000005318 8 0.888 - - - - - - 0.888 - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
36. GPRC5B ENSGALG00000002028 28 0.888 - - - - - - 0.888 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
37. ARL11 ENSGALG00000022733 490 0.879 - - - 0.879 - - - - - - ADP ribosylation factor like GTPase 11 [Source:HGNC Symbol;Acc:HGNC:24046]
38. SULT6B1 ENSGALG00000046375 23 0.874 - - - - - - 0.874 - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
39. ENSGALG00000015793 ENSGALG00000015793 12 0.867 - - - - - - 0.867 - - -
40. WNK1 ENSGALG00000012992 67 0.858 - - - - - - - 0.858 - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
41. ABAT ENSGALG00000007334 28 0.855 - - - - - - 0.855 - - - 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
42. ENSGALG00000002923 ENSGALG00000002923 2233 0.851 - - - 0.851 - - - - - -
43. EHD4 ENSGALG00000008950 22 0.848 - - - - - - 0.848 - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
44. MDH1B ENSGALG00000008548 22 0.848 - - - - - - 0.848 - - - malate dehydrogenase 1B [Source:HGNC Symbol;Acc:HGNC:17836]
45. TEAD3 ENSGALG00000043513 449 0.844 - - - - - - 0.844 - - - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
46. U4 U4 69 0.842 - - - - - - 0.842 - - -
47. SCUBE3 ENSGALG00000002675 12 0.839 - - - - - - 0.839 - - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
48. CCDC177 ENSGALG00000026215 10 0.839 - - - - - - 0.839 - - - coiled-coil domain containing 177
49. CNOT4 ENSGALG00000011682 116 0.835 - - - 0.835 - - - - - - CCR4-NOT transcription complex subunit 4 [Source:NCBI gene;Acc:417936]
50. ENSGALG00000027614 ENSGALG00000027614 38 0.832 - - - - - - 0.832 - - -
51. IKZF1 ENSGALG00000013086 58 0.825 - - - - - - 0.825 - - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
52. SLC30A10 ENSGALG00000026727 669 0.821 - - - 0.821 - - - - - - solute carrier family 30 member 10 [Source:HGNC Symbol;Acc:HGNC:25355]
53. PVALB1 PVALB1 267 0.818 - - - 0.818 - - - - - -
54. GLS ENSGALG00000030419 440 0.813 - - - 0.813 - - - - - - glutaminase [Source:NCBI gene;Acc:424043]
55. C19orf25 551 0.808 - - - - - - - 0.808 - - chromosome 19 open reading frame 25
56. PAIP1 ENSGALG00000014867 202 0.808 - - - 0.808 - - - - - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
57. ATP9A ENSGALG00000007912 25 0.804 - - - - - - 0.804 - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
58. CECR2 ENSGALG00000013034 12 0.804 - - - - - - 0.804 - - - CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
59. PIP4K2A ENSGALG00000007877 72 0.801 - - - - - - - 0.801 - - phosphatidylinositol-5-phosphate 4-kinase type 2 alpha [Source:NCBI gene;Acc:420504]
60. FBXL17 ENSGALG00000000276 2443 0.797 - - - 0.797 - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
61. NUFIP2 ENSGALG00000004042 1122 0.793 - - - 0.793 - - - - - - NUFIP2, FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]
62. EGLN3 ENSGALG00000010001 32 0.791 - - - - - - 0.791 - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
63. UBA2 ENSGALG00000005006 243 0.79 - - - - - - - 0.790 - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
64. ARSD ENSGALG00000016648 33 0.784 - - - - - - 0.784 - - - arylsulfatase D, transcript variant X1
65. GFRA1 ENSGALG00000009173 371 0.779 - - - - - - 0.779 - - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
66. HTR1E ENSGALG00000015826 11 0.779 - - - 0.779 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
67. ZPBP2 ENSGALG00000013484 14 0.779 - - - 0.779 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
68. MCOLN3 ENSGALG00000008709 21 0.777 - - - - 0.777 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
69. RAMP3 ENSGALG00000037246 1187 0.777 - - - - - - 0.777 - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
70. NUP160 ENSGALG00000043074 46 0.776 - - - 0.776 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
71. CP ENSGALG00000030773 119 0.776 - - - 0.776 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
72. PCDH12 ENSGALG00000002544 36 0.775 - - - - - - 0.775 - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
73. RCC1 ENSGALG00000030097 1823 0.775 - - - - - - 0.775 - - - regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913]
74. PCDH20 ENSGALG00000016934 187 0.774 - - - - - - 0.774 - - - protocadherin 20
75. ZDHHC8 ENSGALG00000002124 35 0.774 - - - 0.774 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
76. MKRN2 ENSGALG00000004991 596 0.773 - - - 0.773 - - - - - - makorin ring finger protein 2 [Source:NCBI gene;Acc:374162]
77. MTERFD3 MTERFD3 20 0.773 - - - 0.773 - - - - - -
78. TTC28 ENSGALG00000005676 36 0.772 - - - - - - 0.772 - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
79. CDH10 ENSGALG00000032022 37 0.769 - - - - - - 0.769 - - - cadherin 10 [Source:NCBI gene;Acc:408049]
80. BEGAIN ENSGALG00000011236 35 0.769 - - - 0.769 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
81. TRAF2 ENSGALG00000042838 24 0.767 - - - 0.767 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
82. VEPH1 ENSGALG00000009682 51 0.767 - - - 0.767 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
83. GGT7 ENSGALG00000001062 476 0.767 - - - 0.767 - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
84. ACOX2 ENSGALG00000007132 47 0.766 - - - 0.766 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
85. OXGR1 ENSGALG00000016891 13 0.765 - - - 0.765 - - - - - - oxoglutarate receptor 1
86. GNPTG ENSGALG00000006441 50 0.765 - - - - - - 0.765 - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
87. RGS16 ENSGALG00000033535 139 0.764 - - - 0.764 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
88. MYH13 4 0.762 - - - - - - - 0.762 - - myosin, heavy chain 13, skeletal muscle
89. GLYCTK ENSGALG00000004018 5 0.762 - - - - - - - 0.762 - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
90. CACNA1I ENSGALG00000035051 27 0.762 - - - - - - - 0.762 - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
91. KITLG ENSGALG00000011206 71 0.762 - - - 0.762 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
92. ENSGALG00000026135 ENSGALG00000026135 16 0.762 - - - - - - - 0.762 - -
93. FOXE3 11 0.762 - - - - - - - 0.762 - - forkhead box E3
94. TRERF1 ENSGALG00000009896 42 0.762 - - - - - - - 0.762 - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
95. TUBB3 571 0.762 - - - - - - - 0.762 - - tubulin beta 3 class III
96. ABL2 ENSGALG00000030357 39 0.762 - - - - - - - 0.762 - - ABL proto-oncogene 2, non-receptor tyrosine kinase, transcript variant X2
97. PFKFB2 ENSGALG00000001117 2 0.762 - - - - - - - 0.762 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
98. MAPKAP1 ENSGALG00000000977 193 0.762 - - - - - - 0.762 - - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
99. RAB40B ENSGALG00000001545 8 0.761 - - - - - - - 0.761 - - RAB40B, member RAS oncogene family [Source:NCBI gene;Acc:417338]
100. RFESD ENSGALG00000014673 198 0.76 - - - 0.760 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]

There are 70 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA