Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LHX4

Gene Name Gene ID Reads Annotation
LHX4 ENSGALG00000036587 14 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]











Genes with expression patterns similar to LHX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LHX4 ENSGALG00000036587 14 4 - - 1.000 - - 1.000 1.000 - - 1.000 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
2. MFSD4 MFSD4 1 1.712 - - 0.890 - - - - - - 0.822
3. BFIV21 BFIV21 30 1.669 - - 0.890 - - - 0.779 - - -
4. SS4R SS4R 19 1.633 - - 0.811 - - - - - - 0.822
5. MNR2 ENSGALG00000011349 3340 1.508 - - - - - 0.707 - - - 0.801 homeodomain protein
6. SLC44A3 ENSGALG00000005610 18 1 - - - - - - 1.000 - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
7. MYH7 ENSGALG00000035594 188 1 - - - - - - 1.000 - - - myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
8. DCLK3 ENSGALG00000034493 50 1 - - - - - - 1.000 - - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
9. BTBD3 ENSGALG00000009028 45 1 - - - - - - 1.000 - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
10. MYRF ENSGALG00000041253 13 1 - - - - - - 1.000 - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
11. GALNT11 ENSGALG00000006233 210 1 - - - - - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
12. WIPF2 ENSGALG00000037633 178 1 - - - - - - 1.000 - - - WAS/WASL interacting protein family member 2 [Source:HGNC Symbol;Acc:HGNC:30923]
13. TMCO4 ENSGALG00000004081 31 1 - - - - - - 1.000 - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
14. RUNX3 ENSGALG00000043372 43 1 - - - - - - 1.000 - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
15. PSKH1 5 1 - - - - - - 1.000 - - - protein serine kinase H1, transcript variant X1
16. ENSGALG00000000099 ENSGALG00000000099 16 1 - - - - - - 1.000 - - -
17. OVST_1 ENSGALG00000011930 9 1 - - - - - - 1.000 - - - ovostatin [Source:NCBI gene;Acc:396151]
18. OLFML1 ENSGALG00000027184 19 1 - - - - - - 1.000 - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
19. ENSGALG00000026204 ENSGALG00000026204 2 1 - - - - - - 1.000 - - -
20. NEK8 ENSGALG00000003979 4 1 - - - - - - 1.000 - - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
21. PIK3C3 ENSGALG00000035773 52 1 - - - - - - 1.000 - - - phosphatidylinositol 3-kinase catalytic subunit type 3 [Source:HGNC Symbol;Acc:HGNC:8974]
22. ENSGALG00000023791 ENSGALG00000023791 3 1 - - - - - - 1.000 - - -
23. LOC415324 ENSGALG00000002097 17 1 - - - - - - 1.000 - - - epididymal protein-like, transcript variant X16
24. URB2 ENSGALG00000011101 12 1 - - - - - - 1.000 - - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
25. ST3GAL2 ENSGALG00000002651 20 1 - - - - - - 1.000 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
26. ENSGALG00000024266 ENSGALG00000024266 5 1 - - - - - - 1.000 - - -
27. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - - 1.000 - - -
28. QRSL1 ENSGALG00000015338 16 1 - - - - - - 1.000 - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
29. B3GAT1L ENSGALG00000015075 2 1 - - - - - - 1.000 - - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
30. ENTPD2 ENSGALG00000039696 3 1 - - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
31. OTC ENSGALG00000016254 6 1 - - - - - - 1.000 - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
32. TMEM52B ENSGALG00000034698 169 0.98 - - - - - - 0.980 - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
33. CELF2 ENSGALG00000034590 31 0.964 - - - - - - 0.964 - - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
34. FAM65C 36 0.963 - - - - - - - - - 0.963 family with sequence similarity 65 member C, transcript variant X29
35. KIAA1467 KIAA1467 1 0.963 - - - - - - - - - 0.963
36. CDX1 ENSGALG00000005679 461 0.948 - - - - - - 0.948 - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
37. ENSGALG00000026763 ENSGALG00000026763 10 0.945 - - - - - 0.945 - - - -
38. SHISA3 ENSGALG00000026042 1108 0.929 - - - - - 0.929 - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
39. PDSS2 ENSGALG00000015313 280 0.929 - - - - - - 0.929 - - - Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 2 (PDSS2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318441]
40. USP49 ENSGALG00000003461 10 0.912 - - 0.912 - - - - - - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
41. GPR39 ENSGALG00000012171 420 0.907 - - - - - - 0.907 - - - G protein-coupled receptor 39 [Source:NCBI gene;Acc:424282]
42. GLRA2 ENSGALG00000016571 10 0.899 - - - - - - - - - 0.899 glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
43. ENSGALG00000006003 ENSGALG00000006003 11 0.893 - - 0.893 - - - - - - -
44. PLCB2 ENSGALG00000042105 2 0.89 - - 0.890 - - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
45. ADAMTSL2 ENSGALG00000002955 5 0.89 - - 0.890 - - - - - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
46. AOAH ENSGALG00000035505 6 0.89 - - 0.890 - - - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
47. CACNB4 ENSGALG00000035466 1 0.89 - - 0.890 - - - - - - - calcium voltage-gated channel auxiliary subunit beta 4 [Source:NCBI gene;Acc:374259]
48. CABP4 1 0.89 - - 0.890 - - - - - - - calcium binding protein 4
49. ENSGALG00000008599 ENSGALG00000008599 2 0.89 - - 0.890 - - - - - - -
50. C17orf104 C17orf104 1 0.89 - - 0.890 - - - - - - -
51. TMEM67 ENSGALG00000029287 2 0.89 - - 0.890 - - - - - - - transmembrane protein 67, transcript variant X2
52. CDKN2C ENSGALG00000010537 2 0.89 - - 0.890 - - - - - - - cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
53. RGS13 ENSGALG00000026810 8 0.89 - - 0.890 - - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
54. MEIG1 ENSGALG00000000451 12 0.89 - - 0.890 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
55. GRHL2 ENSGALG00000037687 3 0.89 - - 0.890 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
56. CCDC178 6 0.89 - - 0.890 - - - - - - - coiled-coil domain containing 178, transcript variant X3
57. ENSGALG00000025761 ENSGALG00000025761 6 0.89 - - 0.890 - - - - - - -
58. C2CD3 ENSGALG00000017314 13 0.89 - - 0.890 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
59. ENSGALG00000006582 ENSGALG00000006582 8 0.89 - - 0.890 - - - - - - -
60. MADCAM1 ENSGALG00000028341 6 0.89 - - 0.890 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
61. VANGL2 ENSGALG00000030643 3 0.89 - - 0.890 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
62. ACKR4 ENSGALG00000041491 7 0.89 - - 0.890 - - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
63. TSNAXIP1 ENSGALG00000001533 9 0.89 - - 0.890 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
64. TRAPPC9 ENSGALG00000042766 10 0.89 - - 0.890 - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
65. RNF165 ENSGALG00000031018 4 0.89 - - 0.890 - - - - - - - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
66. STEAP4 ENSGALG00000008997 8 0.89 - - 0.890 - - - - - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
67. TRPC5 ENSGALG00000007972 1 0.89 - - 0.890 - - - - - - - transient receptor potential cation channel subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:12337]
68. CD180 ENSGALG00000023411 14 0.89 - - 0.890 - - - - - - - CD180 molecule [Source:HGNC Symbol;Acc:HGNC:6726]
69. TMED11 ENSGALG00000015722 3 0.89 - - 0.890 - - - - - - - transmembrane emp24 protein transport domain containing 11 [Source:NCBI gene;Acc:422906]
70. ENSGALG00000018621 ENSGALG00000018621 8 0.89 - - 0.890 - - - - - - -
71. INPPL1 ENSGALG00000004336 3 0.89 - - 0.890 - - - - - - - inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
72. SLC2A6 ENSGALG00000002982 1 0.89 - - 0.890 - - - - - - - solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]
73. LRRC9 2 0.89 - - 0.890 - - - - - - - leucine rich repeat containing 9
74. ENSGALG00000011006 ENSGALG00000011006 1 0.89 - - 0.890 - - - - - - -
75. MLKL ENSGALG00000002766 1 0.89 - - 0.890 - - - - - - - mixed lineage kinase domain like pseudokinase [Source:HGNC Symbol;Acc:HGNC:26617]
76. PRKCB ENSGALG00000037943 29 0.89 - - 0.890 - - - - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
77. ENSGALG00000002505 ENSGALG00000002505 1 0.89 - - 0.890 - - - - - - -
78. TOR1AIP2 ENSGALG00000004017 2 0.89 - - 0.890 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
79. ENSGALG00000028957 ENSGALG00000028957 7 0.89 - - 0.890 - - - - - - -
80. ARHGEF17 6 0.89 - - 0.890 - - - - - - - Rho guanine nucleotide exchange factor 17
81. SYT12 ENSGALG00000004306 2 0.89 - - 0.890 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
82. PDE6B ENSGALG00000015373 1 0.89 - - 0.890 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
83. DLL4 ENSGALG00000008514 3 0.89 - - 0.890 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
84. ODF2L ENSGALG00000006804 10 0.89 - - 0.890 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
85. ZNF770 ENSGALG00000009817 27 0.89 - - 0.890 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
86. CNTNAP4 ENSGALG00000023179 13 0.89 - - 0.890 - - - - - - - contactin associated protein like 4
87. NOS2 ENSGALG00000038096 7 0.89 - - 0.890 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
88. CRYGS ENSGALG00000006574 9 0.89 - - 0.890 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
89. ENSGALG00000028137 ENSGALG00000028137 2 0.89 - - 0.890 - - - - - - -
90. ENSGALG00000011411 ENSGALG00000011411 1 0.89 - - 0.890 - - - - - - -
91. DUPD1 ENSGALG00000005019 18 0.89 - - 0.890 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
92. SI ENSGALG00000009511 5 0.89 - - 0.890 - - - - - - - sucrase-isomaltase
93. RAB44 ENSGALG00000000544 6 0.89 - - 0.890 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
94. SLC25A38 ENSGALG00000041275 1 0.89 - - 0.890 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
95. HIVEP3 ENSGALG00000027365 10 0.89 - - 0.890 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
96. KCNAB2 ENSGALG00000037241 1 0.89 - - 0.890 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
97. ARHGEF38 ENSGALG00000010577 1 0.89 - - 0.890 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
98. SNORD53 SNORD53 1 0.89 - - 0.890 - - - - - - -
99. PTPN3 ENSGALG00000022909 6 0.89 - - 0.890 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
100. TMEM56 ENSGALG00000005580 10 0.89 - - 0.890 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]

There are 119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA