Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LHX2

Gene Name Gene ID Reads Annotation
LHX2 ENSGALG00000001124 18 LIM homeobox 2 [Source:NCBI gene;Acc:395705]











Genes with expression patterns similar to LHX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LHX2 ENSGALG00000001124 18 3 - - - 1.000 - - 1.000 1.000 - - LIM homeobox 2 [Source:NCBI gene;Acc:395705]
2. ENSGALG00000011516 ENSGALG00000011516 24 0.998 - - - - - - - 0.998 - -
3. ELOVL2 ENSGALG00000012748 97 0.998 - - - - - - - 0.998 - - ELOVL fatty acid elongase 2 [Source:NCBI gene;Acc:420858]
4. TRIM2 ENSGALG00000009207 44 0.991 - - - - - - - 0.991 - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
5. EIF4ENIF1 ENSGALG00000006898 24 0.986 - - - - - - - 0.986 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
6. SLC25A29 ENSGALG00000011220 17 0.986 - - - - - - - 0.986 - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
7. UNC45A ENSGALG00000029714 158 0.976 - - - - - - - 0.976 - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
8. NKD1 ENSGALG00000003767 76 0.976 - - - - - - - 0.976 - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
9. BRSK2 ENSGALG00000006681 158 0.976 - - - - - - - 0.976 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
10. SPP1 ENSGALG00000010926 8 0.976 - - - - - - - 0.976 - - secreted phosphoprotein 1 [Source:NCBI gene;Acc:395210]
11. ENSGALG00000022857 ENSGALG00000022857 4 0.976 - - - - - - - 0.976 - -
12. CCDC152 CCDC152 28 0.976 - - - - - - - 0.976 - -
13. YAE1D1 23 0.976 - - - - - - - 0.976 - - Yae1 domain containing 1, transcript variant X2
14. ENSGALG00000005543 ENSGALG00000005543 2 0.976 - - - - - - - 0.976 - -
15. GABARAPL3 GABARAPL3 32 0.976 - - - - - - - 0.976 - -
16. MGMT ENSGALG00000042949 53 0.976 - - - - - - - 0.976 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
17. ENSGALG00000005511 ENSGALG00000005511 7 0.976 - - - - - - - 0.976 - -
18. ATP7B ENSGALG00000017021 7 0.976 - - - - - - - 0.976 - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
19. CASR ENSGALG00000038405 53 0.971 - - - - - - - 0.971 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
20. CXorf30 CXorf30 172 0.967 - - - - - - - 0.967 - -
21. HPS3 ENSGALG00000040089 44 0.965 - - - - - - - 0.965 - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
22. FAM122B ENSGALG00000006108 16 0.957 - - - - - - - 0.957 - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
23. SCN3B ENSGALG00000006490 48 0.956 - - - - - - - 0.956 - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
24. CX3CL1 ENSGALG00000026663 218 0.951 - - - - - - - 0.951 - - C-X3-C motif chemokine ligand 1 [Source:NCBI gene;Acc:415651]
25. CBS ENSGALG00000016196 8 0.95 - - - - - - - 0.950 - - cystathionine-beta-synthase, transcript variant X3
26. CLMN ENSGALG00000030719 60 0.948 - - - - - - - 0.948 - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
27. ABRA ENSGALG00000041043 16 0.936 - - - - - - - 0.936 - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
28. PIK3R2 ENSGALG00000003428 205 0.936 - - - - - - - 0.936 - - phosphoinositide-3-kinase regulatory subunit 2
29. COBLL1 ENSGALG00000011068 111 0.932 - - - - - - - 0.932 - - cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
30. PCLO 249 0.931 - - - - - - - 0.931 - - piccolo presynaptic cytomatrix protein
31. LRRC52 ENSGALG00000003443 20 0.928 - - - - - - - 0.928 - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
32. TNFRSF19 ENSGALG00000017119 25 0.925 - - - - - - - 0.925 - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
33. NMRK1 ENSGALG00000015156 88 0.913 - - - - - - - 0.913 - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
34. SLC29A4 ENSGALG00000010497 43 0.902 - - - - - - - 0.902 - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
35. SAMD15 ENSGALG00000010457 69 0.9 - - - - - - - 0.900 - - sterile alpha motif domain containing 15
36. PPP2R5E ENSGALG00000011840 176 0.899 - - - - - - - 0.899 - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
37. SYNRG ENSGALG00000005468 27 0.897 - - - - - - - 0.897 - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
38. C17orf62 C17orf62 37 0.888 - - - - - - - 0.888 - -
39. GOS2 GOS2 116 0.885 - - - - - - - 0.885 - -
40. RMDN3 ENSGALG00000035242 680 0.885 - - - - - - - 0.885 - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
41. PDE7B ENSGALG00000013941 49 0.884 - - - - - - - 0.884 - - phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
42. LAMB2 ENSGALG00000006802 325 0.878 - - - - - - - 0.878 - - laminin, beta 2 (laminin S) [Source:NCBI gene;Acc:373980]
43. CC2D1B ENSGALG00000010619 66 0.87 - - - - - - - 0.870 - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
44. POMT1 ENSGALG00000003757 38 0.864 - - - - - - - 0.864 - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
45. CNOT4 ENSGALG00000011682 116 0.861 - - - - - - - 0.861 - - CCR4-NOT transcription complex subunit 4 [Source:NCBI gene;Acc:417936]
46. TRPS1 ENSGALG00000031700 39 0.852 - - - - - - - 0.852 - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
47. SLC25A19 ENSGALG00000008011 68 0.831 - - - 0.831 - - - - - - solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]
48. MYL3 ENSGALG00000005448 3379 0.828 - - - - - - - 0.828 - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
49. AHNAK2 58 0.827 - - - - - - 0.827 - - - AHNAK nucleoprotein 2, transcript variant X2
50. MTMR14 ENSGALG00000006601 1435 0.812 - - - - - - - 0.812 - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
51. MLLT3 ENSGALG00000015078 502 0.796 - - - - - - - 0.796 - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
52. CDKN2AIP ENSGALG00000010661 1218 0.796 - - - - - - - 0.796 - - CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
53. CRDS2 CRDS2 22 0.795 - - - - - - - 0.795 - -
54. CDR2 ENSGALG00000025743 145 0.787 - - - - - - - 0.787 - - cerebellar degeneration related protein 2 [Source:NCBI gene;Acc:416621]
55. BCL2 ENSGALG00000012885 45 0.778 - - - - - - 0.778 - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
56. CKB ENSGALG00000011511 2100 0.775 - - - - - - - 0.775 - - creatine kinase B [Source:NCBI gene;Acc:396248]
57. NINL 40 0.772 - - - - - - - 0.772 - - ninein like, transcript variant X15
58. SIGIRR ENSGALG00000004267 72 0.769 - - - - - - - 0.769 - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
59. PPHLN1 ENSGALG00000009547 30 0.766 - - - - - - - 0.766 - - periphilin 1 [Source:NCBI gene;Acc:417792]
60. ATRN ENSGALG00000016034 16 0.755 - - - - - - - 0.755 - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
61. ANKRD31 46 0.747 - - - - - - 0.747 - - - ankyrin repeat domain 31, transcript variant X2
62. PCNX PCNX 110 0.743 - - - - - - - 0.743 - -
63. NMU ENSGALG00000020151 29 0.732 - - - - - - 0.732 - - - neuromedin U [Source:NCBI gene;Acc:422748]
64. ENSGALG00000026213 ENSGALG00000026213 562 0.732 - - - - - - 0.732 - - -
65. WASF3 ENSGALG00000017103 50 0.73 - - - - - - - 0.730 - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
66. IMPDH2 ENSGALG00000006910 77 0.73 - - - - - - - 0.730 - - inosine monophosphate dehydrogenase 2 [Source:NCBI gene;Acc:416058]
67. PCYT1B 190 0.729 - - - - - - - 0.729 - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
68. PHOSPHO2 ENSGALG00000020736 92 0.728 - - - - - - - 0.728 - - phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]
69. LOC419851 ENSGALG00000023953 80 0.725 - - - - - - - 0.725 - - complement component 4 binding protein, alpha chain
70. SETD5 ENSGALG00000006571 1499 0.723 - - - - - - - 0.723 - - SET domain containing 5 [Source:NCBI gene;Acc:416046]
71. MAPKAP1 ENSGALG00000000977 193 0.722 - - - - - - 0.722 - - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
72. SPEF2 ENSGALG00000023552 23 0.721 - - - - - - - 0.721 - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
73. ELK4 ENSGALG00000042137 69 0.718 - - - - - - - 0.718 - - ELK4, ETS transcription factor
74. PIK3R1 ENSGALG00000014786 203 0.716 - - - - - - - 0.716 - - phosphoinositide-3-kinase regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:8979]
75. PKP1 ENSGALG00000000299 155 0.716 - - - 0.716 - - - - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
76. FANCF ENSGALG00000003660 25 0.713 - - - - - - 0.713 - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
77. CD300A CD300A 173 0.71 - - - - - - 0.710 - - -
78. NFATC3 ENSGALG00000003396 40 0.709 - - - - - - 0.709 - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
79. ABLIM3 ENSGALG00000002790 101 0.707 - - - - - - - 0.707 - - actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]
80. BRPF1 ENSGALG00000033529 692 0.706 - - - - - - - 0.706 - - bromodomain and PHD finger containing 1 [Source:NCBI gene;Acc:427590]
81. NLGN1 ENSGALG00000040938 651 0.704 - - - - - - - 0.704 - - neuroligin 1 [Source:NCBI gene;Acc:424980]
82. NAPRT1 NAPRT1 227 0.703 - - - - - - - 0.703 - -
83. GRIN1 ENSGALG00000008898 18 0.703 - - - - - - - 0.703 - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
84. SMOC1 ENSGALG00000009415 2403 0.702 - - - - - - - 0.702 - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
85. LOC112532477 ENSGALG00000027520 40 0.701 - - - - - - - 0.701 - - fibrinogen-like protein 1-like protein
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA