Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LHX1

Gene Name Gene ID Reads Annotation
LHX1 ENSGALG00000005409 1 LIM homeobox 1 [Source:NCBI gene;Acc:396381]











Genes with expression patterns similar to LHX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LHX1 ENSGALG00000005409 1 1 - - - - - - - - - 1.000 LIM homeobox 1 [Source:NCBI gene;Acc:396381]
2. GIPC3 ENSGALG00000028029 2 1 - - - - - - - - - 1.000 GIPC PDZ domain containing family member 3 [Source:HGNC Symbol;Acc:HGNC:18183]
3. ENSGALG00000025736 ENSGALG00000025736 3 1 - - - - - - - - - 1.000
4. ENSGALG00000028962 ENSGALG00000028962 7 0.962 - - - - - - - - - 0.962
5. XG ENSGALG00000029002 17 0.951 - - - - - - - - - 0.951 Xg blood group
6. TLR7 ENSGALG00000016590 6 0.912 - - - - - - - - - 0.912 toll like receptor 7 [Source:NCBI gene;Acc:418638]
7. ANKS3 ENSGALG00000000643 2 0.912 - - - - - - - - - 0.912 ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
8. IL8 ENSGALG00000026098 16 0.912 - - - - - - - - - 0.912 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
9. CCDC178 6 0.912 - - - - - - - - - 0.912 coiled-coil domain containing 178, transcript variant X3
10. SLC2A1 ENSGALG00000004889 10 0.912 - - - - - - - - - 0.912 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
11. RHOC ENSGALG00000001569 53 0.912 - - - - - - - - - 0.912 ras homolog family member C [Source:NCBI gene;Acc:395869]
12. KLHL35 ENSGALG00000017332 1 0.912 - - - - - - - - - 0.912 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
13. CD38 ENSGALG00000014508 3 0.912 - - - - - - - - - 0.912 CD38 molecule [Source:NCBI gene;Acc:422827]
14. GTSF1 ENSGALG00000001109 15 0.912 - - - - - - - - - 0.912 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
15. SLC4A5 ENSGALG00000032146 3 0.912 - - - - - - - - - 0.912 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
16. HAAO ENSGALG00000009926 6 0.912 - - - - - - - - - 0.912 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
17. ENSGALG00000008598 ENSGALG00000008598 2 0.912 - - - - - - - - - 0.912
18. GPR83 ENSGALG00000017212 6 0.912 - - - - - - - - - 0.912 G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
19. NMU ENSGALG00000020151 29 0.912 - - - - - - - - - 0.912 neuromedin U [Source:NCBI gene;Acc:422748]
20. LY96 ENSGALG00000032701 18 0.912 - - - - - - - - - 0.912 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
21. AHR2 ENSGALG00000023742 21 0.912 - - - - - - - - - 0.912 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
22. ENSGALG00000026135 ENSGALG00000026135 16 0.912 - - - - - - - - - 0.912
23. ENSGALG00000026169 ENSGALG00000026169 30 0.912 - - - - - - - - - 0.912
24. ENSGALG00000014502 ENSGALG00000014502 2 0.912 - - - - - - - - - 0.912
25. VSTM2A ENSGALG00000041764 2 0.912 - - - - - - - - - 0.912 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
26. ENSGALG00000019640 ENSGALG00000019640 2 0.912 - - - - - - - - - 0.912
27. SNORD79 SNORD79 12 0.91 - - - - - - - - - 0.910
28. FAM83B ENSGALG00000016299 17 0.908 - - - - - - - - - 0.908 family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
29. MMP23B ENSGALG00000001392 53 0.9 - - - - - - - - - 0.900 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
30. SEMA4D ENSGALG00000010697 10 0.896 - - - - - - - - - 0.896 semaphorin 4D [Source:NCBI gene;Acc:396331]
31. ZBTB33 ENSGALG00000008611 15 0.843 - - - - - - - - - 0.843 zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
32. UCP3 ENSGALG00000017316 30 0.84 - - - - - - - - - 0.840 uncoupling protein 3 [Source:NCBI gene;Acc:373896]
33. SMC1B ENSGALG00000014228 19 0.834 - - - - - - - - - 0.834 structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
34. SPP2 ENSGALG00000004129 34 0.832 - - - - - - - - - 0.832 secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
35. ENSGALG00000027201 ENSGALG00000027201 12 0.831 - - - - - - - - - 0.831
36. FXR FXR 52 0.831 - - - - - - - - - 0.831
37. RNF17 ENSGALG00000045414 2 0.807 - - - - - - - - - 0.807 ring finger protein 17, transcript variant X2
38. ENSGALG00000027602 ENSGALG00000027602 20 0.807 - - - - - - - - - 0.807
39. PHOSPHO1 ENSGALG00000033683 22 0.804 - - - - - - - - - 0.804 phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
40. DMRT1 ENSGALG00000010160 425 0.795 - - - - - - - - - 0.795 doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
41. gga-mir-6558 ENSGALG00000032123 13 0.787 - - - - - - - - - 0.787 gga-mir-6558 [Source:miRBase;Acc:MI0022376]
42. D2HGDH ENSGALG00000039535 3 0.783 - - - - - - - - - 0.783 D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
43. NIPAL1 ENSGALG00000027986 11 0.777 - - - - - - - - - 0.777 NIPA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
44. DFNB59 ENSGALG00000023439 4 0.776 - - - - - - - - - 0.776 deafness, autosomal recessive 59, transcript variant X1
45. BFIV21 BFIV21 30 0.775 - - - - - - - - - 0.775
46. CCDC84 ENSGALG00000007689 18 0.775 - - - - - - - - - 0.775 coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
47. TNFRSF18 ENSGALG00000001882 12 0.765 - - - - - - - - - 0.765 TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
48. GPR18 ENSGALG00000022750 36 0.763 - - - - - - - - - 0.763 G protein-coupled receptor 18 [Source:HGNC Symbol;Acc:HGNC:4472]
49. SRMS ENSGALG00000005852 174 0.756 - - - - - - - - - 0.756 src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
50. LVRN ENSGALG00000002318 14 0.756 - - - - - - - - - 0.756 laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
51. STAT1 ENSGALG00000007651 24 0.756 - - - - - - - - - 0.756 signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
52. LIMS2 ENSGALG00000001995 41 0.75 - - - - - - - - - 0.750 LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
53. TMEM170B ENSGALG00000012744 24 0.748 - - - - - - - - - 0.748 transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
54. ETNK1 ENSGALG00000013205 18 0.745 - - - - - - - - - 0.745 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
55. KIAA1841 ENSGALG00000007825 22 0.744 - - - - - - - - - 0.744 KIAA1841 [Source:NCBI gene;Acc:421196]
56. CHRNA5 ENSGALG00000003021 83 0.739 - - - - - - - - - 0.739 cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]
57. BSPRY ENSGALG00000008861 98 0.737 - - - - - - - - - 0.737 B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
58. SHANK2 ENSGALG00000035916 9 0.736 - - - - - - - - - 0.736 SH3 and multiple ankyrin repeat domains 2, transcript variant X10
59. ATP6V1H ENSGALG00000013621 13 0.736 - - - - - - - - - 0.736 ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
60. RBBP8NL ENSGALG00000045938 89 0.721 - - - - - - - - - 0.721 RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
61. KCNE3 ENSGALG00000022696 561 0.718 - - - - - - - - - 0.718 potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
62. MALT1 ENSGALG00000030063 104 0.717 - - - - - - - - - 0.717 MALT1 paracaspase [Source:HGNC Symbol;Acc:HGNC:6819]
63. DRD4 ENSGALG00000040761 79 0.715 - - - - - - - - - 0.715 dopamine receptor D4 [Source:NCBI gene;Acc:423016]
64. CX3CR1 ENSGALG00000038000 48 0.706 - - - - - - - - - 0.706 C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA