Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LGR4

Gene Name Gene ID Reads Annotation
LGR4 ENSGALG00000040834 5529 leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]











Genes with expression patterns similar to LGR4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LGR4 ENSGALG00000040834 5529 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
2. AMBRA1 ENSGALG00000008358 2865 1.675 - - 0.867 - - - 0.808 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
3. GTF2H2 ENSGALG00000002399 2361 1.62 - - 0.891 - - - 0.729 - - - general transcription factor IIH subunit 2, transcript variant X2
4. BAG5 ENSGALG00000031062 4498 1.611 - - 0.870 - - - 0.741 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
5. ZNF639 ENSGALG00000005944 6387 1.598 - - 0.860 - - - 0.738 - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
6. SHMT1 ENSGALG00000005046 1430 1.593 - - 0.870 - - - 0.723 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
7. NUPL1 NUPL1 8197 1.583 - - 0.786 - - - 0.797 - - -
8. UBR2 ENSGALG00000009906 7717 1.575 - - 0.813 - - - 0.762 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
9. SWIP-1 SWIP-1 6024 1.574 - - - - - - 0.790 - - 0.784
10. SMC4 ENSGALG00000009553 15715 1.57 - - 0.802 - - - 0.768 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
11. AKTIP ENSGALG00000033378 1991 1.56 - - 0.847 - - - 0.713 - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
12. SMAD1 ENSGALG00000009977 3540 1.558 - - 0.835 - - - - 0.723 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
13. ASH2L ENSGALG00000003233 4814 1.549 - - 0.801 - - - 0.748 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
14. PIGK ENSGALG00000009015 7942 1.548 - - 0.835 - - - 0.713 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
15. TRMT10B ENSGALG00000029118 3093 1.546 - - 0.825 - - - 0.721 - - - tRNA methyltransferase 10B [Source:HGNC Symbol;Acc:HGNC:26454]
16. GPC4 ENSGALG00000006080 56498 1.541 - - - - - - 0.802 0.739 - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
17. C6ORF162 C6ORF162 4217 1.534 - - 0.813 - - - - 0.721 - -
18. BRF1 ENSGALG00000011705 3406 1.525 - - 0.796 - - - 0.729 - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
19. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.522 - - 0.812 - - - - 0.710 - -
20. NCAPD2 ENSGALG00000039448 8658 1.522 - - 0.801 - - - 0.721 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
21. FNDC5 ENSGALG00000003567 3328 1.521 - - 0.794 - - - - 0.727 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
22. C17orf75 ENSGALG00000003434 4262 1.521 - - 0.803 - - - - 0.718 - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
23. BNIP3L ENSGALG00000043405 10316 1.519 - - 0.729 - - - 0.790 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
24. SLIT2 ENSGALG00000041121 3223 1.516 - - 0.807 - - - - 0.709 - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
25. SCML2 ENSGALG00000016537 9348 1.513 - - 0.721 - - - 0.792 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
26. FARP1 ENSGALG00000016886 13132 1.512 - - 0.763 - - - 0.749 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
27. TMEM167A ENSGALG00000027332 13862 1.512 - - 0.790 - - - 0.722 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
28. POGLUT1 ENSGALG00000015480 12290 1.509 - - 0.786 - - - 0.723 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
29. ATP2B1 ENSGALG00000030550 15123 1.505 - - - - - - 0.744 0.761 - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
30. BMS1 ENSGALG00000002624 8339 1.494 - - 0.734 - - - 0.760 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
31. GABARAPL2 ENSGALG00000003208 9195 1.472 - - 0.728 - - - 0.744 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
32. PIK3IP1 ENSGALG00000006942 8388 1.468 - - 0.723 - - - 0.745 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
33. TMEM144 ENSGALG00000026253 1744 1.464 - - - - - - 0.742 0.722 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
34. C2CD5 ENSGALG00000013210 3060 1.462 - - - - - - 0.741 0.721 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
35. GTF2H3 ENSGALG00000023682 9914 1.456 - - 0.718 - - - 0.738 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
36. PDLIM7 ENSGALG00000026159 4700 1.455 - - 0.751 - - - 0.704 - - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
37. KIAA0355 ENSGALG00000004949 4352 1.447 - - - - - - 0.723 0.724 - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
38. SPCS3 ENSGALG00000010839 19106 1.446 - - 0.735 - - - 0.711 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
39. KLHL13 KLHL13 2712 1.444 - - - - - - 0.729 0.715 - -
40. PRPSAP2 ENSGALG00000005064 5549 1.425 - - - - - - 0.719 0.706 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
41. LCMT1 ENSGALG00000005973 1300 0.916 - - 0.916 - - - - - - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
42. NDUFB1 ENSGALG00000028537 2059 0.913 - - 0.913 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
43. CENPO ENSGALG00000016609 1699 0.909 - - 0.909 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
44. SMARCAD1 ENSGALG00000037339 149 0.906 - - 0.906 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
45. ATP10D ENSGALG00000014192 94 0.906 - - 0.906 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
46. SLK ENSGALG00000008318 2220 0.905 - - 0.905 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
47. UHRF2 ENSGALG00000015052 1268 0.904 - - 0.904 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
48. UBE2E3 ENSGALG00000020793 9517 0.901 - - 0.901 - - - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
49. OSGIN2 ENSGALG00000042840 83 0.901 - - 0.901 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
50. SELK SELK 15022 0.9 - - 0.900 - - - - - - -
51. ABCE1 ENSGALG00000009961 958 0.9 - - 0.900 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
52. SGCE ENSGALG00000009670 3070 0.9 - - 0.900 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
53. RALGDS ENSGALG00000003412 4478 0.899 - - 0.899 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
54. MED15 ENSGALG00000006430 814 0.899 - - 0.899 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
55. AMFR ENSGALG00000003107 6560 0.899 - - 0.899 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
56. LRRC71 ENSGALG00000027351 695 0.897 - - 0.897 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
57. YBX3 ENSGALG00000031890 819 0.897 - - 0.897 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
58. CAMSAP1 ENSGALG00000001692 2617 0.897 - - 0.897 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
59. TCTN2 ENSGALG00000023683 3596 0.896 - - 0.896 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
60. CLEC16A ENSGALG00000007167 66 0.896 - - 0.896 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
61. SNN ENSGALG00000028876 1687 0.896 - - 0.896 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
62. NUBP1 ENSGALG00000007241 3791 0.895 - - 0.895 - - - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
63. DBN1 ENSGALG00000033405 216 0.895 - - 0.895 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
64. L3MBTL3 ENSGALG00000034030 113 0.895 - - 0.895 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
65. MED12 ENSGALG00000036322 814 0.894 - - 0.894 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
66. CEP104 ENSGALG00000000978 1130 0.894 - - 0.894 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
67. NXPE3 ENSGALG00000015344 111 0.894 - - 0.894 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
68. ENSGALG00000002020 ENSGALG00000002020 183 0.893 - - 0.893 - - - - - - -
69. C18orf8 C18orf8 1512 0.893 - - 0.893 - - - - - - -
70. FBXL5 ENSGALG00000014510 245 0.893 - - 0.893 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
71. SZT2 ENSGALG00000028561 255 0.892 - - 0.892 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
72. SLC3A1 ENSGALG00000009973 608 0.892 - - 0.892 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
73. FAM134C 860 0.892 - - 0.892 - - - - - - - family with sequence similarity 134 member C
74. ABCC3 ENSGALG00000007522 340 0.892 - - 0.892 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
75. U4 U4 69 0.892 - - 0.892 - - - - - - -
76. ENSGALG00000020103 ENSGALG00000020103 64 0.892 - - 0.892 - - - - - - -
77. IFT57 ENSGALG00000015356 5540 0.892 - - 0.892 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
78. PTDSS2 ENSGALG00000004300 682 0.891 - - 0.891 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
79. CDC14B ENSGALG00000012627 110 0.891 - - 0.891 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
80. UEVLD ENSGALG00000006342 164 0.89 - - 0.890 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
81. TDRD6 48 0.89 - - 0.890 - - - - - - - tudor domain containing 6
82. ITGB4 ENSGALG00000002389 44 0.89 - - 0.890 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
83. PTPN2 ENSGALG00000013867 1128 0.89 - - 0.890 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
84. MRC2 ENSGALG00000000461 48 0.89 - - 0.890 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
85. AKAP10 ENSGALG00000004679 103 0.89 - - 0.890 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
86. BBS5 ENSGALG00000009846 344 0.89 - - 0.890 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
87. ENSGALG00000028964 ENSGALG00000028964 46 0.89 - - 0.890 - - - - - - -
88. ITM2B ENSGALG00000016996 1112 0.889 - - 0.889 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
89. ATP8B4 ENSGALG00000002326 456 0.889 - - 0.889 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
90. IFT81 ENSGALG00000003854 2534 0.889 - - 0.889 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
91. MAN2C1 ENSGALG00000001615 2362 0.889 - - 0.889 - - - - - - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
92. CA9 ENSGALG00000021340 1431 0.889 - - 0.889 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
93. TRIM13 ENSGALG00000017011 92 0.888 - - 0.888 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
94. DDX6 ENSGALG00000033064 2193 0.888 - - 0.888 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
95. RQCD1 RQCD1 110 0.888 - - 0.888 - - - - - - -
96. ENSGALG00000004703 ENSGALG00000004703 112 0.888 - - 0.888 - - - - - - -
97. RRN3 ENSGALG00000041989 3934 0.888 - - 0.888 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
98. CGNL1 ENSGALG00000004294 1177 0.888 - - 0.888 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
99. LRRC42 ENSGALG00000010743 384 0.888 - - 0.888 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
100. ACOT7 ENSGALG00000000652 7976 0.888 - - - - - - - 0.888 - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]

There are 727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA