Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LGR4

Gene Name Gene ID Reads Annotation
LGR4 ENSDARG00000060542 1222 leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]










Genes with expression patterns similar to LGR4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LGR4 ENSDARG00000060542 1222 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
2. xrcc5_1 ENSDARG00000099298 1533 2.418 - 0.858 - - - - 0.747 0.813 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
3. C19H1orf51 C19H1orf51 1776 2.273 0.728 - - - 0.747 - 0.798 - -
4. pum1 ENSDARG00000099256 5017 2.161 - 0.708 - - - - 0.731 0.722 - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
5. kctd6a ENSDARG00000043095 480 1.672 - 0.830 - - - - - 0.842 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
6. vhl ENSDARG00000070617 663 1.664 - 0.827 - - - - - 0.837 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
7. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.657 - 0.867 - - - - - 0.790 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
8. sec22c ENSDARG00000063387 203 1.633 - 0.802 - - - - - 0.831 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
9. uso1 ENSDARG00000019581 479 1.621 - 0.799 - - - - - 0.822 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
10. prdx4 ENSDARG00000069013 1150 1.604 - 0.782 - - - - 0.822 - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
11. cbfb ENSDARG00000040917 1422 1.595 - 0.746 - - - - - 0.849 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
12. ctnnal1 ENSDARG00000018162 747 1.592 - - - - - - 0.755 0.837 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
13. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.584 - - - - - - 0.742 0.842 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
14. palm1b ENSDARG00000007818 2128 1.581 - 0.866 - - - - 0.715 - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
15. FBXL3 FBXL3 1769 1.58 - 0.817 - - - - 0.763 - -
16. ppap2b ppap2b 2900 1.578 - - - - - - 0.764 0.814 -
17. cry1b cry1b 152 1.554 - 0.839 - - - - 0.715 - -
18. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 1.553 - - - - - - 0.728 0.825 - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
19. xrcc5 ENSDARG00000099298 835 1.552 - 0.749 - - - - 0.803 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
20. ccl25b ENSDARG00000070873 454 1.551 - 0.823 - - - - 0.728 - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
21. pop5 ENSDARG00000053452 1347 1.533 - - - - - - 0.725 0.808 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
22. gna11b ENSDARG00000053326 5118 1.532 - 0.781 - - - - 0.751 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
23. pole ENSDARG00000058533, ENSDARG00000115430 381 1.529 - 0.756 - - - - - 0.773 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
24. qki2 ENSDARG00000010018 2230 1.524 - 0.727 - - - - - 0.797 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
25. araf ENSDARG00000054533 1132 1.522 - 0.808 - - - - 0.714 - - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
26. pigh ENSDARG00000038348 405 1.514 - 0.786 - - - - - 0.728 - phosphatidylinositol glycan anchor biosynthesis, class H [Source:ZFIN;Acc:ZDB-GENE-040718-303]
27. nfatc2ip ENSDARG00000011360 603 1.514 - 0.717 - - - - - 0.797 - nuclear factor of activated T cells 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-9520]
28. ephb4a ENSDARG00000100725 1749 1.498 - - - - - - 0.729 0.769 - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
29. sh3glb2a ENSDARG00000008983 452 1.494 - 0.722 - - - - - 0.772 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
30. crkl ENSDARG00000028699 2966 1.49 - - - - - - 0.705 0.785 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
31. luc7l ENSDARG00000055903 3357 1.484 - 0.771 - - - - 0.713 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
32. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 1.48 - 0.738 - 0.742 - - - - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
33. si:dkey-46m10.3 si:dkey-46m10.3 246 1.479 - 0.743 - - - - 0.736 - -
34. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.474 - - - - - - 0.705 0.769 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
35. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.472 - - - - - 0.748 0.724 - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
36. ddx27 ENSDARG00000091831 1471 1.469 - - - - - - 0.723 0.746 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
37. polr2k ENSDARG00000075616 2047 1.468 - - - - - - 0.709 0.759 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
38. FAT2 ENSDARG00000018923 1088 1.463 - 0.713 - - - 0.750 - - - FAT atypical cadherin 2 [Source:ZFIN;Acc:ZDB-GENE-111031-1]
39. nop16 ENSDARG00000044402 3645 1.454 - - - - - - 0.733 0.721 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
40. srsf6a ENSDARG00000013729 8576 1.442 - - - - - 0.708 0.734 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
41. gstm gstm 4064 1.441 - - - - - - 0.725 0.716 -
42. pfkfb4l pfkfb4l 2539 1.402 - - - - 0.701 - 0.701 - -
43. magoh ENSDARG00000038635, ENSDARG00000109837 2880 0.919 - 0.919 - - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
44. olfml2a ENSDARG00000005648 1157 0.916 - 0.916 - - - - - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
45. TRMT10A ENSDARG00000036678 621 0.916 - 0.916 - - - - - - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
46. TRIM14_7 TRIM14_7 381 0.91 - 0.910 - - - - - - -
47. pawr ENSDARG00000045486 1580 0.91 - 0.910 - - - - - - - PRKC, apoptosis, WT1, regulator [Source:ZFIN;Acc:ZDB-GENE-041010-108]
48. pola2 ENSDARG00000015070 2286 0.909 - 0.909 - - - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
49. rfx2 ENSDARG00000013575 1275 0.907 - - - - - - - 0.907 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
50. snx1a ENSDARG00000071031 3975 0.905 - - - - - - 0.905 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
51. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 0.904 - 0.904 - - - - - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
52. si:ch211-214e3.5 ENSDARG00000074270 755 0.904 - 0.904 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
53. sepp1b 1004 0.897 - 0.897 - - - - - - - selenoprotein P, plasma, 1b
54. golga1 ENSDARG00000008979 779 0.896 - 0.896 - - - - - - - golgin A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1237]
55. si:dkey-222o15.5 si:dkey-222o15.5 27 0.896 - 0.896 - - - - - - -
56. TNFRSF11B ENSDARG00000098377 98 0.896 - 0.896 - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
57. kalrnb ENSDARG00000063538, ENSDARG00000111077, ENSDARG00000111084 880 0.896 - - - - - - - 0.896 - kalirin RhoGEF kinase b [Source:ZFIN;Acc:ZDB-GENE-060421-7244]
58. BX548021.2_1 BX548021.2_1 164 0.895 - - - - - - - 0.895 -
59. mak ENSDARG00000059287 144 0.895 - 0.895 - - - - - - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
60. gsg1l ENSDARG00000037390 181 0.895 - 0.895 - - - - - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
61. C1H7orf55 C1H7orf55 2552 0.894 - - - - - - 0.894 - -
62. grik1a ENSDARG00000069139 130 0.894 - 0.894 - - - - - - - glutamate receptor, ionotropic, kainate 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6502]
63. si:dkey-92i17.2 ENSDARG00000093612 707 0.893 - - - - - - - 0.893 - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
64. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 0.891 - 0.891 - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
65. CU928220.2 CU928220.2 537 0.89 - 0.890 - - - - - - -
66. cables1 ENSDARG00000099395 361 0.89 - 0.890 - - - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
67. tmem168a ENSDARG00000068705 498 0.89 - 0.890 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
68. mertk mertk 1232 0.89 - 0.890 - - - - - - -
69. kif7 ENSDARG00000033099 971 0.886 - 0.886 - - - - - - - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
70. sh3glb1 sh3glb1 1335 0.885 - - - - - - - 0.885 -
71. slc6a13l 121 0.885 - 0.885 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
72. si:dkey-22o22.2 ENSDARG00000102445 149 0.884 - - - - - - - 0.884 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
73. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 0.883 - - - - - - - 0.883 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
74. sh3bgrl2 ENSDARG00000036878 282 0.883 - - - - - - - 0.883 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
75. usp10 ENSDARG00000103422 4247 0.883 - 0.883 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
76. chuk ENSDARG00000011662 1668 0.882 - 0.882 - - - - - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
77. SLC35E2B ENSDARG00000109717 1463 0.881 - 0.881 - - - - - - - solute carrier family 35 member E2B [Source:HGNC Symbol;Acc:HGNC:33941]
78. wu:fc32g12 wu:fc32g12 198 0.88 - 0.880 - - - - - - -
79. dhrsx ENSDARG00000079280 239 0.88 - 0.880 - - - - - - - dehydrogenase/reductase (SDR family) X-linked [Source:ZFIN;Acc:ZDB-GENE-060620-2]
80. cdh11 ENSDARG00000021442 1601 0.88 - - - - - - 0.880 - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
81. zgc:163143 ENSDARG00000076437 166 0.878 - - - - - - - 0.878 - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
82. fdx1l 461 0.878 - 0.878 - - - - - - - ferredoxin 1-like
83. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 0.877 - - - - - - - 0.877 - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
84. kat6a ENSDARG00000018907 250 0.876 - 0.876 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
85. nupl1 nupl1 1100 0.876 - 0.876 - - - - - - -
86. UNC119 UNC119 104 0.875 - - - - - - - 0.875 -
87. arhgap4a ENSDARG00000039265 181 0.874 - 0.874 - - - - - - - Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
88. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.873 - 0.873 - - - - - - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
89. nr4a3 ENSDARG00000055854 113 0.873 - 0.873 - - - - - - - nuclear receptor subfamily 4, group A, member 3 [Source:ZFIN;Acc:ZDB-GENE-070824-4]
90. col12a1a ENSDARG00000078322 1833 0.872 - 0.872 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
91. CR925758.1 CR925758.1 83 0.872 - 0.872 - - - - - - -
92. rpz2 ENSDARG00000091215 765 0.872 - 0.872 - - - - - - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
93. prpf39 ENSDARG00000100209 3721 0.871 - 0.871 - - - - - - - PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
94. tmem141 ENSDARG00000101963 513 0.871 - 0.871 - - - - - - - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
95. elovl4b ENSDARG00000027495 107 0.871 - - - - - - - 0.871 - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
96. si:dkey-25o1.2 si:dkey-25o1.2 86 0.87 - - - - - - - 0.870 -
97. ctbp2 ctbp2 3255 0.87 - 0.870 - - - - - - -
98. capn7 ENSDARG00000102987 386 0.87 - - - - - - - 0.870 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
99. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.867 - - - - - - - 0.867 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
100. tmem2 2572 0.865 - - - - - - - 0.865 - transmembrane protein 2, transcript variant X1

There are 1173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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