Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LETMD1

Gene Name Gene ID Reads Annotation
LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]










Genes with expression patterns similar to LETMD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 5 - - 1.000 1.000 1.000 - - 1.000 1.000 LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]
2. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.649 - - - 0.915 - - - - 0.734 ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
3. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.64 - - 0.891 - 0.749 - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
4. dnaaf2 ENSDARG00000103132 24 1 - - - - - - - - 1.000 dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
5. csf1ra ENSDARG00000102986 2 1 - - - - - - - - 1.000 colony stimulating factor 1 receptor, a [Source:ZFIN;Acc:ZDB-GENE-001205-1]
6. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - - - - - - - 1.000 BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
7. irgf3 ENSDARG00000062820 20 1 - - - - - - - - 1.000 immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
8. CABZ01112027.1 CABZ01112027.1 2 1 - - - - - - - - 1.000
9. SMU1 SMU1 3 1 - - - - - - - - 1.000
10. CR855273.1 CR855273.1 2 1 - - - - - - - - 1.000
11. zgc:114037_1 10 1 - - - - - - - - 1.000 zgc:114037
12. BX569798.1 ENSDARG00000037619 3 1 - - - - - - - - 1.000 guanine nucleotide-binding protein subunit alpha-12-like [Source:NCBI gene;Acc:797518]
13. npy2r ENSDARG00000094763, ENSDARG00000112792 2 1 - - - - - - - - 1.000 neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
14. DYNLRB2 DYNLRB2 12 1 - - - - - - - - 1.000
15. CU929145.3 ENSDARG00000097274 3 1 - - - - - - - - 1.000
16. zgc:113340 ENSDARG00000097473 2 1 - - - - - - - - 1.000 zgc:113340 [Source:ZFIN;Acc:ZDB-GENE-050327-34]
17. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - - - - - - - - 1.000 transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
18. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - - - - - 1.000 aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
19. BX088524.1 ENSDARG00000101383 2 1 - - - - - - - - 1.000
20. sstr1a ENSDARG00000104922 22 1 - - - - - - - - 1.000 somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
21. si:dkey-256e7.8 ENSDARG00000092022 4 0.992 - - - - - - - - 0.992 si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
22. CU457819.2 ENSDARG00000105374 8 0.988 - - - - - - - - 0.988 Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
23. bckdhb ENSDARG00000014676 17 0.988 - - - - 0.988 - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
24. si:dkey-228i19.34 si:dkey-228i19.34 43 0.975 - - - - - - - - 0.975
25. zgc:158856 zgc:158856 23 0.974 - - - - 0.974 - - - -
26. bgna ENSDARG00000017884 9 0.967 - - - 0.967 - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
27. ftr58 ENSDARG00000071238 10 0.954 - - - 0.954 - - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
28. MFAP4_3 MFAP4_3 7 0.954 - - - 0.954 - - - - -
29. PHF21B ENSDARG00000109502 6 0.954 - - - 0.954 - - - - - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
30. si:dkey-3p4.4 si:dkey-3p4.4 2 0.954 - - - 0.954 - - - - -
31. si:ch73-27e22.6 ENSDARG00000031731 12 0.954 - - - 0.954 - - - - - si:ch73-27e22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-234]
32. gata1b ENSDARG00000059130 151 0.954 - - - - - - - - 0.954 GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
33. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 0.954 - - - 0.954 - - - - - zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
34. si:ch211-225p5.10 si:ch211-225p5.10 4 0.954 - - - 0.954 - - - - -
35. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 0.954 - - - 0.954 - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
36. si:dkey-19c16.1 si:dkey-19c16.1 2 0.954 - - - 0.954 - - - - -
37. thpo ENSDARG00000079158 1 0.954 - - - 0.954 - - - - - thrombopoietin [Source:ZFIN;Acc:ZDB-GENE-110510-1]
38. AHSG AHSG 3 0.954 - - - 0.954 - - - - -
39. chpfb ENSDARG00000078037 30 0.954 - - - 0.954 - - - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
40. ARHGEF38 ENSDARG00000079377 9 0.954 - - - - - - - - 0.954 Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
41. mxg ENSDARG00000008019 4 0.954 - - - 0.954 - - - - - myxovirus (influenza virus) resistance G [Source:ZFIN;Acc:ZDB-GENE-030721-10]
42. AL929378.1 ENSDARG00000117372 4 0.954 - - - 0.954 - - - - -
43. tmtopsa 1 0.954 - - - 0.954 - - - - - teleost multiple tissue opsin a
44. MUC5B_1 MUC5B_1 7 0.954 - - - 0.954 - - - - -
45. U2_5 U2_5 5 0.954 - - - 0.954 - - - - -
46. si:ch211-246m6.4 ENSDARG00000042857 1 0.954 - - - 0.954 - - - - - si:ch211-246m6.4 [Source:ZFIN;Acc:ZDB-GENE-050208-498]
47. CABZ01019904.1 ENSDARG00000104193 6 0.954 - - - 0.954 - - - - -
48. BX957278.1_1 ENSDARG00000010940 9 0.954 - - - 0.954 - - - - -
49. CR847990.1 CR847990.1 21 0.954 - - - 0.954 - - - - -
50. si:ch211-197g15.9 1 0.954 - - - 0.954 - - - - - si:ch211-197g15.9, transcript variant X2
51. FAM20C FAM20C 4 0.949 - - - - - - - - 0.949
52. dnah12 ENSDARG00000059987 110 0.949 - - - - - - - - 0.949 dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
53. asap3 ENSDARG00000021896 19 0.948 - - - 0.948 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
54. ncf2 ENSDARG00000005821 28 0.946 - - 0.946 - - - - - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
55. BX649431.1 ENSDARG00000098522 13 0.936 - - - 0.936 - - - - -
56. myo7aa ENSDARG00000099871 23 0.931 - - - - - - - - 0.931 myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
57. ms4a17a.4 ENSDARG00000014024 36 0.929 - - 0.929 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
58. CU467642.1 CU467642.1 8 0.922 - - - - - - - - 0.922
59. CABZ01002345.1 CABZ01002345.1 3 0.921 - - 0.921 - - - - - -
60. si:dkey-261e22.5 si:dkey-261e22.5 68 0.921 - - - - - - - - 0.921
61. si:dkey-193n17.9 ENSDARG00000094791 2 0.916 - - - 0.916 - - - - - si:dkey-193n17.9 [Source:ZFIN;Acc:ZDB-GENE-070912-421]
62. LRFN2_1 LRFN2_1 17 0.913 - - 0.913 - - - - - -
63. EPS15L1 EPS15L1 22 0.911 - - - - 0.911 - - - -
64. CAMKK1 CAMKK1 2 0.911 - - - - 0.911 - - - -
65. si:dkey-19a16.2 ENSDARG00000058794 8 0.911 - - - - - - - - 0.911 si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
66. calml4a ENSDARG00000075800 14 0.911 - - 0.911 - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
67. si:dkey-100h21.2 si:dkey-100h21.2 30 0.911 - - - - 0.911 - - - -
68. htr1bd htr1bd 8 0.911 - - - - 0.911 - - - -
69. ATP5J_1 ATP5J_1 15 0.911 - - - - 0.911 - - - -
70. si:ch73-299h12.1_1 ENSDARG00000102321 8 0.911 - - - - 0.911 - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
71. TRIM35_9 TRIM35_9 1 0.911 - - - - 0.911 - - - -
72. BX119910.2 BX119910.2 2 0.911 - - - - 0.911 - - - -
73. CR855257.1 ENSDARG00000094941 1 0.911 - - - - 0.911 - - - -
74. CU469500.4 CU469500.4 2 0.911 - - - - 0.911 - - - -
75. tyrobp ENSDARG00000094894 16 0.911 - - - - 0.911 - - - - TYRO protein tyrosine kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-061130-2]
76. CABZ01025393.1 CABZ01025393.1 37 0.911 - - - - 0.911 - - - -
77. tmprss13b ENSDARG00000077573 47 0.911 - - - - 0.911 - - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
78. gbgt1l1 ENSDARG00000025275 21 0.91 - - 0.910 - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
79. antxr1a ENSDARG00000025672 32 0.91 - - 0.910 - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
80. rhoga ENSDARG00000068653 13 0.91 - - 0.910 - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
81. si:dkey-26i13.6 ENSDARG00000092200 3 0.91 - - 0.910 - - - - - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
82. ifnphi1 ENSDARG00000025607 6 0.91 - - 0.910 - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
83. CU207301.2 ENSDARG00000097677 2 0.91 - - 0.910 - - - - - -
84. XCR1 XCR1 9 0.91 - - 0.910 - - - - - -
85. kcnd2 ENSDARG00000032799 1 0.91 - - 0.910 - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-041210-70]
86. ENSDARG00000089100 ENSDARG00000089100 5 0.91 - - 0.910 - - - - - -
87. igfbp6a ENSDARG00000070941 9 0.91 - - 0.910 - - - - - - insulin-like growth factor binding protein 6a [Source:ZFIN;Acc:ZDB-GENE-090521-1]
88. si:ch211-204a13.1 si:ch211-204a13.1 6 0.91 - - 0.910 - - - - - -
89. si:ch211-179l5.4 si:ch211-179l5.4 3 0.91 - - 0.910 - - - - - -
90. si:ch211-173b9.5 si:ch211-173b9.5 2 0.91 - - 0.910 - - - - - -
91. ighm ighm 6 0.908 - - 0.908 - - - - - -
92. BX530067.1 BX530067.1 20 0.907 - - - - 0.907 - - - -
93. TMEM114 ENSDARG00000038089 13 0.907 - - - 0.907 - - - - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
94. si:ch211-102g22.3 si:ch211-102g22.3 2 0.903 - - - - 0.903 - - - -
95. lmbrd2a ENSDARG00000099566 15 0.903 - - - - 0.903 - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
96. BX324215.3 BX324215.3 12 0.903 - - - - 0.903 - - - -
97. WIPF1 WIPF1 32 0.901 - - 0.901 - - - - - -
98. si:dkey-164k14.1 si:dkey-164k14.1 5 0.9 - - - - 0.900 - - - -
99. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 0.899 - - 0.899 - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
100. tsen54 ENSDARG00000036844 11 0.897 - - 0.897 - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]

There are 147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA