Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LDLRAD4

Gene Name Gene ID Reads Annotation
LDLRAD4 LDLRAD4 1237










Genes with expression patterns similar to LDLRAD4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LDLRAD4 LDLRAD4 1237 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. st18 663 3.27 - - - 0.878 - 0.816 0.744 - 0.832 suppression of tumorigenicity 18, zinc finger
3. EML6 250 3.174 - 0.877 - - - 0.763 0.745 - 0.789 echinoderm microtubule associated protein like 6
4. rtn1b ENSDARG00000021143 1682 3.052 - - - 0.847 - 0.743 0.709 - 0.753 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
5. C19H7orf41 C19H7orf41 2243 3.029 - - - 0.778 - 0.825 0.725 - 0.701
6. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 2.631 - - - 0.853 - - - 0.975 0.803 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
7. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.597 - 0.956 - - - 0.925 0.716 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
8. gipc1 ENSDARG00000104483 2913 2.561 - - - 0.845 - - 0.738 0.978 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
9. marcksa ENSDARG00000004049 2518 2.55 - - - 0.887 - - 0.789 - 0.874 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
10. mdkb ENSDARG00000020708 5393 2.533 - - - 0.837 - 0.867 0.829 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
11. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.531 - - - - - 0.809 - 0.887 0.835 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
12. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.518 - - - 0.728 - 0.820 - 0.970 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
13. hmgb3a ENSDARG00000056725 15668 2.515 - - - - - - 0.796 0.922 0.797 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
14. cadm3 ENSDARG00000057013 1545 2.502 - - - - - 0.760 - 0.956 0.786 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
15. bsk146 ENSDARG00000099069 274 2.492 - - - - - 0.770 0.733 0.989 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
16. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.485 - - - 0.847 - 0.879 0.759 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
17. nadl1.1 1200 2.481 - - - - - - 0.726 0.962 0.793 neural adhesion molecule L1.1, transcript variant X1
18. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.471 - - - 0.790 - 0.854 - - 0.827 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
19. AP3B2 1874 2.458 - - - - - 0.720 - 0.970 0.768 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
20. ndrg4 ENSDARG00000103937 1234 2.452 - - - 0.847 - 0.757 - - 0.848 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
21. myef2 ENSDARG00000059398 6050 2.43 - - - - - 0.846 - 0.861 0.723 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
22. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.424 - - - 0.774 - - - 0.892 0.758 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
23. gap43 ENSDARG00000099744 4114 2.423 - - - - - 0.818 0.727 - 0.878 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
24. hnrnpub ENSDARG00000004735 16496 2.412 - - - - - 0.760 0.785 - 0.867 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
25. CT030046.1 CT030046.1 190 2.401 - 0.906 - - - 0.780 0.715 - -
26. max ENSDARG00000024844 6035 2.399 - - - 0.794 - - - 0.860 0.745 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
27. coe2 coe2 1633 2.393 - 0.868 - - - 0.700 - - 0.825
28. CLIP3 ENSDARG00000054456 734 2.386 - - - 0.858 - 0.804 - - 0.724 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
29. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.384 - - - - - - 0.712 0.887 0.785 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
30. aplp1 ENSDARG00000098368 2317 2.383 - - - - - 0.809 - 0.733 0.841 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
31. zbtb18 ENSDARG00000028228 3653 2.375 - - - 0.743 - 0.785 - - 0.847 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
32. hmp19 2554 2.367 - - - - - 0.816 0.730 - 0.821 HMP19 protein
33. btg2 ENSDARG00000020298 6616 2.366 - - - - - 0.812 0.770 0.784 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
34. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.361 - - - 0.946 - 0.713 - - 0.702 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
35. golga7ba ENSDARG00000036295 1460 2.347 - - - 0.734 - - 0.746 - 0.867 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
36. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.343 - - - - - 0.852 - 0.730 0.761 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
37. tox ENSDARG00000032317 9126 2.326 - - - - - 0.740 0.761 - 0.825 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
38. bri3bp ENSDARG00000010108 6295 2.325 - - - - - - 0.829 0.778 0.718 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
39. tuba1c ENSDARG00000055216 8384 2.323 - - - - - 0.758 0.709 - 0.856 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
40. nrarpb ENSDARG00000018958 6225 2.311 - - - - - 0.759 0.715 - 0.837 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
41. slc17a6b ENSDARG00000041150 823 2.309 - - - - - 0.759 - 0.822 0.728 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
42. wdhd1 ENSDARG00000015998 775 2.292 - - - 0.870 - - 0.719 - 0.703 WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
43. PAXBP1 ENSDARG00000062361 626 2.276 - 0.708 - - - 0.822 - - 0.746 PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
44. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.276 - - - - - 0.772 0.725 - 0.779 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
45. dpysl4 ENSDARG00000103490 534 2.237 - - - - - 0.725 0.715 - 0.797 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
46. ssbp3b ENSDARG00000030155 7163 2.227 - - - - - 0.737 0.754 - 0.736 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
47. rap2ip rap2ip 681 2.222 - - - - - 0.736 0.703 - 0.783
48. stmn2b ENSDARG00000070537 1586 2.205 - - - 0.764 - 0.736 - 0.705 - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
49. srpk1b ENSDARG00000031560 2079 2.175 - - - - - 0.769 0.705 - 0.701 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
50. si:ch211-113e8.11 ENSDARG00000076585 721 1.898 - - - 0.915 - - - 0.983 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
51. eef1a1a ENSDARG00000039502 234 1.876 - - - 0.888 - - - 0.988 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
52. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.862 - 0.882 - - - - - 0.980 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
53. GATAD2B ENSDARG00000005834 3855 1.847 - - - - - - - 0.959 0.888 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
54. vamp2 ENSDARG00000056877 2158 1.834 - - - - - - - 0.968 0.866 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
55. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 1.831 - - - 0.843 - - - 0.988 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
56. bcl11ab ENSDARG00000063153 3032 1.83 - - - - - 0.916 - - 0.914 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
57. ube2z ENSDARG00000029215 1059 1.828 - - - 0.866 - - - 0.962 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
58. CR387996.1 ENSDARG00000097774 3037 1.821 - - - - - 0.862 - 0.959 -
59. FBXL3 FBXL3 1769 1.81 - - - 0.869 - - - 0.941 -
60. si:ch211-207m11.3 si:ch211-207m11.3 401 1.807 - 0.889 - - - - - 0.918 -
61. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.802 - - - - - 0.816 - 0.986 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
62. BX957337.1 BX957337.1 1685 1.789 - - - - - 0.820 - 0.969 -
63. tnika ENSDARG00000056218 728 1.787 - - - - - 0.803 - 0.984 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
64. pcdh10b ENSDARG00000102824 732 1.78 - - - - - - - 0.986 0.794 protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
65. MANEAL ENSDARG00000056450 262 1.775 - - - - - 0.784 - 0.991 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
66. si:ch211-194k22.8 ENSDARG00000096711 1318 1.772 - - - - - 0.803 - 0.969 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
67. podxl ENSDARG00000031228 1744 1.752 - 0.822 - - - - - 0.930 - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
68. CABZ01038494.1 ENSDARG00000088258 908 1.751 - - - - - 0.770 - 0.981 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
69. CABZ01073424.1 ENSDARG00000107858 688 1.749 - - - 0.765 - - - 0.984 -
70. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.748 - - - - - - - 0.986 0.762 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
71. tnfaip3 ENSDARG00000027777 1066 1.747 - - - - - - - 0.939 0.808 tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
72. xkr6 xkr6 286 1.745 - - - - - 0.758 - 0.987 -
73. rexo1 ENSDARG00000026986 770 1.74 - - - 0.898 - - - - 0.842 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
74. si:ch211-113a14.18 ENSDARG00000051735 1253 1.74 - - - - - - - 0.990 0.750 si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
75. foxp1b ENSDARG00000014181 2594 1.738 - - - - - - - 0.955 0.783 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
76. THEM4 ENSDARG00000061621 364 1.738 - 0.752 - - - - - 0.986 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
77. top2a ENSDARG00000024488 4273 1.737 - - - - - - - 0.969 0.768 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
78. TDG TDG 1191 1.735 - - - 0.750 - - - 0.985 -
79. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.734 - - - - - 0.747 - 0.987 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
80. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.734 - 0.893 - - - 0.841 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
81. fzd3a ENSDARG00000021664 1958 1.731 - - - - - - - 0.896 0.835 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
82. XKR7 ENSDARG00000026333 175 1.731 - - - - - 0.743 - 0.988 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
83. cetn2 ENSDARG00000101510 541 1.726 - - - - - - 0.737 0.989 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
84. phc2b_1 ENSDARG00000013224 1316 1.723 - - - - - 0.766 - 0.957 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
85. klc2 3058 1.722 - - - 0.778 - - - 0.944 - kinesin light chain 2
86. slc6a1b ENSDARG00000039647 1301 1.722 - - - - - 0.808 - 0.914 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
87. rgs20 ENSDARG00000038859 331 1.721 - - - 0.945 - 0.776 - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
88. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.719 - - - - - - - 0.963 0.756 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
89. plk4 ENSDARG00000004576 688 1.712 - - - - - 0.726 - 0.986 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
90. si:ch211-59m15.1 87 1.711 - 0.831 - 0.880 - - - - - si:ch211-59m15.1
91. nlk1 ENSDARG00000006566 1123 1.711 - - - - - - - 0.983 0.728 nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
92. Sep-06 Sep-06 5465 1.709 - - - - - - - 0.957 0.752
93. lzic ENSDARG00000055899 638 1.709 - 0.822 - 0.887 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
94. si:dkey-100n10.2 101 1.707 - - - 0.889 - 0.818 - - - si:dkey-100n10.2
95. mfap1 ENSDARG00000018241 833 1.704 - - - 0.764 - - - 0.940 - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
96. prkcbp1l ENSDARG00000011932 2714 1.704 - - - 0.857 - 0.847 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
97. napg napg 645 1.702 - - - - - 0.718 - 0.984 -
98. dnaja2l ENSDARG00000010745 2367 1.698 - - - - - - - 0.868 0.830 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
99. irf2a ENSDARG00000007387 915 1.698 - - - 0.708 - - - 0.990 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
100. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.696 - - - - - - - 0.960 0.736 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]

There are 2420 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA