Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LDLRAD3

Gene Name Gene ID Reads Annotation
LDLRAD3 ENSGALG00000038913 4 low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]











Genes with expression patterns similar to LDLRAD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LDLRAD3 ENSGALG00000038913 4 3 - - - 1.000 - 1.000 1.000 - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
2. MYO1D ENSGALG00000000674 14 1.803 - - - - - 0.947 0.856 - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
3. FXYD2 ENSGALG00000007320 168 1 - - - - - 1.000 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
4. PCSK1 ENSGALG00000014681 73 1 - - - 1.000 - - - - - - proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
5. RBM47 ENSGALG00000014267 6 1 - - - - - 1.000 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
6. MYH13 4 1 - - - 1.000 - - - - - - myosin, heavy chain 13, skeletal muscle
7. GGT5 ENSGALG00000040504 24 1 - - - - - 1.000 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
8. gga-mir-6579-2 ENSGALG00000035346 7 1 - - - - - 1.000 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
9. GPR114 GPR114 46 1 - - - - - 1.000 - - - -
10. SPTBN5 395 1 - - - - - 1.000 - - - - spectrin beta, non-erythrocytic 5
11. SEMA4G ENSGALG00000026957 11 1 - - - 1.000 - - - - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
12. ITPRIP ENSGALG00000025780 4 1 - - - 1.000 - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
13. CNGA3 ENSGALG00000039826 3 1 - - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
14. PTPN23 ENSGALG00000038522 93 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
15. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - - 1.000 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
16. NKX2-5 ENSGALG00000002886 81 1 - - - - - 1.000 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
17. KLC4 ENSGALG00000030384 154 1 - - - 1.000 - - - - - - kinesin light chain 4, transcript variant X5
18. ENSGALG00000020819 ENSGALG00000020819 2 1 - - - - - 1.000 - - - -
19. SCMH1 ENSGALG00000000672 3 1 - - - 1.000 - - - - - - Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
20. RASSF6 ENSGALG00000011664 7 1 - - - - - 1.000 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
21. ENSGALG00000018528 ENSGALG00000018528 1 1 - - - - - 1.000 - - - -
22. KLHL1 ENSGALG00000016907 21 1 - - - - - 1.000 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
23. LFABP LFABP 5 1 - - - - - 1.000 - - - -
24. MID2 ENSGALG00000003860 3 1 - - - 1.000 - - - - - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
25. ESAM ENSGALG00000032943 1 1 - - - - - 1.000 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
26. ENSGALG00000026341 ENSGALG00000026341 1 1 - - - - - 1.000 - - - -
27. CNP3 CNP3 10 1 - - - 1.000 - - - - - -
28. TTC28 ENSGALG00000005676 36 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
29. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - 1.000 - - - -
30. Six3os1 Six3os1 1 1 - - - - - 1.000 - - - -
31. FIP1L1 ENSGALG00000013943 15 1 - - - - - 1.000 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
32. ENSGALG00000018356 ENSGALG00000018356 22 1 - - - 1.000 - - - - - -
33. ENSGALG00000021375 ENSGALG00000021375 1 1 - - - - - 1.000 - - - -
34. SLC30A1 ENSGALG00000009858 5 1 - - - - - 1.000 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
35. HAPLN4 ENSGALG00000026563 9 1 - - - - - 1.000 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
36. EDNRB2 ENSGALG00000007466 1 1 - - - - - 1.000 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
37. SYT15 ENSGALG00000002046 3 1 - - - - - 1.000 - - - - synaptotagmin 15, transcript variant X1
38. EFCAB12 EFCAB12 15 0.983 - - - - - 0.983 - - - -
39. CMTR2 ENSGALG00000002356 3 0.979 - - - - - 0.979 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
40. RECQL5 ENSGALG00000002424 16 0.979 - - - - - 0.979 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
41. FZD1 ENSGALG00000009064 76 0.974 - - - - - 0.974 - - - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
42. UROC1 ENSGALG00000006306 75 0.973 - - - - - 0.973 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
43. AMPD1 ENSGALG00000002082 228 0.962 - - - - - 0.962 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
44. CIP1 CIP1 44 0.954 - - - 0.954 - - - - - -
45. TMEM72 ENSGALG00000026808 5 0.954 - - - 0.954 - - - - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
46. ENSGALG00000027170 ENSGALG00000027170 6 0.954 - - - - - 0.954 - - - -
47. RIBC2 ENSGALG00000014232 13 0.947 - - - - - 0.947 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
48. MBTPS2 ENSGALG00000016382 259 0.944 - - - - - 0.944 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
49. TNIP2 ENSGALG00000015666 28 0.941 - - - - - 0.941 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
50. SYNJ1 ENSGALG00000034317 7 0.925 - - - 0.925 - - - - - - synaptojanin 1 [Source:HGNC Symbol;Acc:HGNC:11503]
51. CEP170B ENSGALG00000011639 71 0.921 - - - - - 0.921 - - - - centrosomal protein 170B, transcript variant X13
52. SMG7 ENSGALG00000004667 707 0.918 - - - - - 0.918 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
53. HPS6 ENSGALG00000020741 4 0.903 - - - - - 0.903 - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
54. GTPBP6 ENSGALG00000016717 17 0.903 - - - - - 0.903 - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
55. TNR ENSGALG00000004526 6 0.892 - - - - - 0.892 - - - - tenascin R [Source:NCBI gene;Acc:396213]
56. INSC ENSGALG00000032558 74 0.889 - - - - - 0.889 - - - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
57. SPERT ENSGALG00000016981 145 0.889 - - - - - 0.889 - - - - spermatid associated [Source:NCBI gene;Acc:418848]
58. LRAT ENSGALG00000009276 220 0.882 - - - - - 0.882 - - - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
59. EPYC ENSGALG00000011269 17 0.87 - - - - - 0.870 - - - - epiphycan [Source:NCBI gene;Acc:417890]
60. ARSG ENSGALG00000004193 21 0.869 - - - - - 0.869 - - - - arylsulfatase G [Source:NCBI gene;Acc:771433]
61. WNK1 ENSGALG00000012992 67 0.869 - - - - - 0.869 - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
62. SMPDL3B ENSGALG00000000737 223 0.863 - - - - - - 0.863 - - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
63. ENSGALG00000006592 ENSGALG00000006592 83 0.861 - - - - - 0.861 - - - -
64. TMEM206 ENSGALG00000009822 80 0.858 - - - - - 0.858 - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
65. HLCS ENSGALG00000016047 30 0.857 - - - - - 0.857 - - - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
66. RYR3 ENSGALG00000009705 30 0.856 - - - - - - 0.856 - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
67. C20orf85 ENSGALG00000027484 3 0.856 - - - - - - 0.856 - - - chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
68. MOG ENSGALG00000022875 9 0.856 - - - - - - 0.856 - - - myelin oligodendrocyte glycoprotein, transcript variant X50
69. ATXN3 ENSGALG00000010766 48 0.856 - - - - - - 0.856 - - - ataxin 3 [Source:NCBI gene;Acc:378424]
70. DNASE2 DNASE2 58 0.856 - - - - - - 0.856 - - -
71. RHAG ENSGALG00000016684 2 0.856 - - - - - - 0.856 - - - Rh associated glycoprotein [Source:NCBI gene;Acc:395118]
72. TRDN ENSGALG00000014848 130 0.856 - - - - - - 0.856 - - - triadin
73. MBD5 ENSGALG00000012449 27 0.856 - - - - - - 0.856 - - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
74. HGSNAT ENSGALG00000010136 18 0.856 - - - - - - 0.856 - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
75. Mar-11 Mar-11 16 0.856 - - - - - - 0.856 - - -
76. H6PD ENSGALG00000002492 3 0.856 - - - - - - 0.856 - - - hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
77. GPR97 GPR97 16 0.856 - - - - - - 0.856 - - -
78. LOC431653 ENSGALG00000025921 4 0.856 - - - - - - 0.856 - - - LOC431653, transcript variant X3
79. ENSGALG00000028652 ENSGALG00000028652 65 0.856 - - - - - - 0.856 - - -
80. SLC2A10 ENSGALG00000004498 421 0.856 - - - - - - 0.856 - - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
81. HSD3B7 ENSGALG00000045366 12 0.856 - - - - - - 0.856 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
82. PIT-1 PIT-1 8 0.856 - - - - - - 0.856 - - -
83. KLF7 ENSGALG00000008501 2 0.856 - - - - - - 0.856 - - - Gallus gallus Kruppel like factor 7 (KLF7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318990]
84. ZNF804A ENSGALG00000023886 52 0.856 - - - - - - 0.856 - - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
85. FAR2 ENSGALG00000017291 16 0.856 - - - - - - 0.856 - - - fatty acyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:25531]
86. AFTPH ENSGALG00000008828 21 0.856 - - - - - - 0.856 - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
87. CYLD ENSGALG00000003753 11 0.856 - - - - - - 0.856 - - - CYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]
88. CCDC39 ENSGALG00000021855 23 0.856 - - - - - - 0.856 - - - coiled-coil domain containing 39
89. SNORD94 SNORD94 10 0.856 - - - - - - 0.856 - - -
90. GRM8 ENSGALG00000039403 17 0.856 - - - - - - 0.856 - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
91. EIF4ENIF1 ENSGALG00000006898 24 0.856 - - - - - - 0.856 - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
92. GABRA2 ENSGALG00000014206 19 0.856 - - - - - - 0.856 - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
93. CPA6 ENSGALG00000041918 54 0.856 - - - - - - 0.856 - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
94. GBF1 ENSGALG00000005637 32 0.856 - - - - - - 0.856 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
95. MTHFD2L ENSGALG00000010855 14 0.856 - - - - - - 0.856 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
96. CHRNA10 ENSGALG00000022702 7 0.856 - - - - - - 0.856 - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
97. BDH1B ENSGALG00000006976 9 0.856 - - - - - - 0.856 - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
98. PIGR ENSGALG00000000919 3 0.856 - - - - - - 0.856 - - - polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
99. ENSGALG00000028769 ENSGALG00000028769 11 0.856 - - - - - - 0.856 - - -
100. C8orf37 ENSGALG00000038971 5 0.856 - - - - - - 0.856 - - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA