Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LDHD

Gene Name Gene ID Reads Annotation
LDHD ENSGALG00000023828 60 lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]











Genes with expression patterns similar to LDHD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LDHD ENSGALG00000023828 60 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
2. MYCT1 ENSGALG00000013603 44 1.566 - - 0.781 - - - 0.785 - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
3. GLOD5 ENSGALG00000025991 17 1.453 - - 0.711 - - 0.742 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
4. TVB TVB 11 1 - - - - - - 1.000 - - -
5. FBLN7 ENSGALG00000046358 27 1 - - - - - - 1.000 - - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
6. PARP3 ENSGALG00000004517 331 0.96 - - - - - - - - - 0.960 poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
7. MT1 MT1 218 0.946 - - - - - - - 0.946 - -
8. RAB37 ENSGALG00000027789 17 0.945 - - - - 0.945 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
9. gga-mir-99a ENSGALG00000018242 192 0.928 - - - - 0.928 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
10. TRIM14 ENSGALG00000015315 22 0.928 - - - - 0.928 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
11. PRKAR2B ENSGALG00000008060 40 0.928 - - - - 0.928 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
12. THRB ENSGALG00000011294 7 0.928 - - - - 0.928 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
13. IL22RA1 ENSGALG00000004221 71 0.928 - - - - 0.928 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
14. ZNFX1 ENSGALG00000004859 33 0.923 - - - - 0.923 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
15. SLCO1B1 ENSGALG00000019276 7 0.922 - - - - 0.922 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
16. ENSGALG00000027427 ENSGALG00000027427 16 0.912 - - - - 0.912 - - - - -
17. RNF208 ENSGALG00000008911 141 0.909 - - - - - - 0.909 - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
18. SS4R SS4R 19 0.905 - - 0.905 - - - - - - -
19. SRP54 ENSGALG00000023135 372 0.905 - - - - 0.905 - - - - - signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
20. MALSU1 ENSGALG00000010954 51 0.904 - - - - 0.904 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
21. SIM1 ENSGALG00000015466 111 0.897 - - - - - - - 0.897 - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
22. SCUBE1 ENSGALG00000014178 91 0.895 - - - - 0.895 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
23. CEP170B ENSGALG00000011639 71 0.894 - - - - 0.894 - - - - - centrosomal protein 170B, transcript variant X13
24. SLC24A2 ENSGALG00000015080 54 0.892 - - - - 0.892 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
25. ENSGALG00000005433 ENSGALG00000005433 55 0.889 - - - - 0.889 - - - - -
26. FBXO40 ENSGALG00000013999 2 0.885 - - 0.885 - - - - - - - F-box protein 40 [Source:HGNC Symbol;Acc:HGNC:29816]
27. ENSGALG00000006740 ENSGALG00000006740 30 0.883 - - 0.883 - - - - - - -
28. ZNF770 ENSGALG00000009817 27 0.881 - - 0.881 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
29. CNTNAP4 ENSGALG00000023179 13 0.881 - - 0.881 - - - - - - - contactin associated protein like 4
30. NOS2 ENSGALG00000038096 7 0.881 - - 0.881 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
31. CRYGS ENSGALG00000006574 9 0.881 - - 0.881 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
32. ENSGALG00000028137 ENSGALG00000028137 2 0.881 - - 0.881 - - - - - - -
33. ENSGALG00000011411 ENSGALG00000011411 1 0.881 - - 0.881 - - - - - - -
34. DUPD1 ENSGALG00000005019 18 0.881 - - 0.881 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
35. ENSGALG00000028957 ENSGALG00000028957 7 0.881 - - 0.881 - - - - - - -
36. TOR1AIP2 ENSGALG00000004017 2 0.881 - - 0.881 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
37. ARHGEF17 6 0.881 - - 0.881 - - - - - - - Rho guanine nucleotide exchange factor 17
38. SYT12 ENSGALG00000004306 2 0.881 - - 0.881 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
39. PDE6B ENSGALG00000015373 1 0.881 - - 0.881 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
40. BFIV21 BFIV21 30 0.881 - - 0.881 - - - - - - -
41. DLL4 ENSGALG00000008514 3 0.881 - - 0.881 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
42. ODF2L ENSGALG00000006804 10 0.881 - - 0.881 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
43. ATP6V1C2 ENSGALG00000016446 3 0.881 - - 0.881 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
44. TFAP4 ENSGALG00000027823 12 0.881 - - 0.881 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
45. AMOTL1 ENSGALG00000017208 5 0.881 - - 0.881 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
46. CHIC2 ENSGALG00000013931 21 0.881 - - 0.881 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
47. SI ENSGALG00000009511 5 0.881 - - 0.881 - - - - - - - sucrase-isomaltase
48. RAB44 ENSGALG00000000544 6 0.881 - - 0.881 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
49. SLC25A38 ENSGALG00000041275 1 0.881 - - 0.881 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
50. KCNAB2 ENSGALG00000037241 1 0.881 - - 0.881 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
51. HIVEP3 ENSGALG00000027365 10 0.881 - - 0.881 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
52. SNORD53 SNORD53 1 0.881 - - 0.881 - - - - - - -
53. ARHGEF38 ENSGALG00000010577 1 0.881 - - 0.881 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
54. TMEM56 ENSGALG00000005580 10 0.881 - - 0.881 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
55. PTPN3 ENSGALG00000022909 6 0.881 - - 0.881 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
56. RGS13 ENSGALG00000026810 8 0.881 - - 0.881 - - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
57. MEIG1 ENSGALG00000000451 12 0.881 - - 0.881 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
58. GRHL2 ENSGALG00000037687 3 0.881 - - 0.881 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
59. CCDC178 6 0.881 - - 0.881 - - - - - - - coiled-coil domain containing 178, transcript variant X3
60. C2CD3 ENSGALG00000017314 13 0.881 - - 0.881 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
61. ENSGALG00000025761 ENSGALG00000025761 6 0.881 - - 0.881 - - - - - - -
62. MFSD4 MFSD4 1 0.881 - - 0.881 - - - - - - -
63. ENSGALG00000006582 ENSGALG00000006582 8 0.881 - - 0.881 - - - - - - -
64. MADCAM1 ENSGALG00000028341 6 0.881 - - 0.881 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
65. TSNAXIP1 ENSGALG00000001533 9 0.881 - - 0.881 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
66. VANGL2 ENSGALG00000030643 3 0.881 - - 0.881 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
67. ACKR4 ENSGALG00000041491 7 0.881 - - 0.881 - - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
68. PLCB2 ENSGALG00000042105 2 0.881 - - 0.881 - - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
69. ADAMTSL2 ENSGALG00000002955 5 0.881 - - 0.881 - - - - - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
70. AOAH ENSGALG00000035505 6 0.881 - - 0.881 - - - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
71. CACNB4 ENSGALG00000035466 1 0.881 - - 0.881 - - - - - - - calcium voltage-gated channel auxiliary subunit beta 4 [Source:NCBI gene;Acc:374259]
72. CABP4 1 0.881 - - 0.881 - - - - - - - calcium binding protein 4
73. ENSGALG00000008599 ENSGALG00000008599 2 0.881 - - 0.881 - - - - - - -
74. C17orf104 C17orf104 1 0.881 - - 0.881 - - - - - - -
75. CDKN2C ENSGALG00000010537 2 0.881 - - 0.881 - - - - - - - cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
76. TMEM67 ENSGALG00000029287 2 0.881 - - 0.881 - - - - - - - transmembrane protein 67, transcript variant X2
77. INPPL1 ENSGALG00000004336 3 0.881 - - 0.881 - - - - - - - inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
78. SLC2A6 ENSGALG00000002982 1 0.881 - - 0.881 - - - - - - - solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]
79. LRRC9 2 0.881 - - 0.881 - - - - - - - leucine rich repeat containing 9
80. ENSGALG00000011006 ENSGALG00000011006 1 0.881 - - 0.881 - - - - - - -
81. PRKCB ENSGALG00000037943 29 0.881 - - 0.881 - - - - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
82. MLKL ENSGALG00000002766 1 0.881 - - 0.881 - - - - - - - mixed lineage kinase domain like pseudokinase [Source:HGNC Symbol;Acc:HGNC:26617]
83. ENSGALG00000002505 ENSGALG00000002505 1 0.881 - - 0.881 - - - - - - -
84. TRAPPC9 ENSGALG00000042766 10 0.881 - - 0.881 - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
85. STEAP4 ENSGALG00000008997 8 0.881 - - 0.881 - - - - - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
86. RNF165 ENSGALG00000031018 4 0.881 - - 0.881 - - - - - - - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
87. CD180 ENSGALG00000023411 14 0.881 - - 0.881 - - - - - - - CD180 molecule [Source:HGNC Symbol;Acc:HGNC:6726]
88. TMED11 ENSGALG00000015722 3 0.881 - - 0.881 - - - - - - - transmembrane emp24 protein transport domain containing 11 [Source:NCBI gene;Acc:422906]
89. TRPC5 ENSGALG00000007972 1 0.881 - - 0.881 - - - - - - - transient receptor potential cation channel subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:12337]
90. ENSGALG00000018621 ENSGALG00000018621 8 0.881 - - 0.881 - - - - - - -
91. DENND2A ENSGALG00000012857 350 0.875 - - - - - - - - - 0.875 DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
92. LOC770405 ENSGALG00000013105 25 0.872 - - - - 0.872 - - - - - SUN domain-containing protein 3-like, transcript variant X2
93. CNR1 ENSGALG00000037511 38 0.872 - - - - 0.872 - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
94. FBXO32 ENSGALG00000041202 1066 0.868 - - - - - - - - - 0.868 F-box protein 32 [Source:NCBI gene;Acc:420343]
95. CDK14 ENSGALG00000009062 995 0.866 - - - - 0.866 - - - - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
96. MAL2 ENSGALG00000040768 75 0.865 - - - - 0.865 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
97. SLC7A6 ENSGALG00000029324 427 0.864 - - - - - - - - - 0.864 solute carrier family 7 member 6 [Source:HGNC Symbol;Acc:HGNC:11064]
98. WARS ENSGALG00000011228 193 0.86 - - - - 0.860 - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
99. HHLA2 ENSGALG00000022871 19 0.858 - - - - 0.858 - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
100. TSPO ENSGALG00000014166 60 0.856 - - - - - - 0.856 - - - translocator protein [Source:NCBI gene;Acc:418226]

There are 240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA