Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LDB1

Gene Name Gene ID Reads Annotation
LDB1 ENSGALG00000007641 2 LIM domain binding 1 [Source:NCBI gene;Acc:395952]











Genes with expression patterns similar to LDB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LDB1 ENSGALG00000007641 2 4 - - 1.000 1.000 - 1.000 - - - 1.000 LIM domain binding 1 [Source:NCBI gene;Acc:395952]
2. KLHL23 ENSGALG00000020737 13 2 - - - 1.000 - - - - - 1.000 kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
3. RPS6KA2 ENSGALG00000011473 2 2 - - 1.000 - - 1.000 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
4. SP-A SP-A 9 1.937 - - 0.937 - - 1.000 - - - -
5. ZMAT3 ENSGALG00000040948 4 1.883 - - - 1.000 - - - - - 0.883 zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
6. ITGB6 ENSGALG00000011141 2 1 - - 1.000 - - - - - - - integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]
7. DLGAP1 ENSGALG00000014793 1 1 - - 1.000 - - - - - - - DLG associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2905]
8. ENPP4 ENSGALG00000016708 18 1 - - - - - 1.000 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
9. POMGNT1 ENSGALG00000010351 3 1 - - 1.000 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
10. VMO1 ENSGALG00000017172 1 1 - - - 1.000 - - - - - - vitelline membrane outer layer 1 homolog [Source:NCBI gene;Acc:418974]
11. ENSGALG00000002074 ENSGALG00000002074 1 1 - - 1.000 - - - - - - -
12. DNMBP ENSGALG00000007304 4 1 - - - - - 1.000 - - - - dynamin binding protein
13. VPS37D 3 1 - - - - - 1.000 - - - - VPS37D, ESCRT-I subunit
14. ENTPD1 ENSGALG00000007078 5 1 - - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:NCBI gene;Acc:423826]
15. ODF2L ENSGALG00000006804 10 1 - - - - - - - - - 1.000 outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
16. F-KER ENSGALG00000028706 0 1 - - - - - 1.000 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
17. MAVS ENSGALG00000040428 1 1 - - - - - 1.000 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
18. C1orf170 C1orf170 7 1 - - - - - - - - - 1.000
19. CARF ENSGALG00000008474 6 1 - - - - - 1.000 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
20. FAM83A ENSGALG00000041748 8 1 - - - - - - - - - 1.000 family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
21. JAKMIP3 ENSGALG00000010486 2 1 - - - - - - - - - 1.000 Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
22. HID1 ENSGALG00000007808 2 1 - - - - - 1.000 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
23. OVST_1 ENSGALG00000011930 9 1 - - - - - 1.000 - - - - ovostatin [Source:NCBI gene;Acc:396151]
24. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - - - - 1.000 gga-mir-1801 [Source:miRBase;Acc:MI0007545]
25. ENSGALG00000026782 ENSGALG00000026782 0 1 - - - 1.000 - - - - - -
26. ENSGALG00000015905 ENSGALG00000015905 5 1 - - 1.000 - - - - - - -
27. IMPG1 ENSGALG00000015897 4 1 - - - - - - - - - 1.000 interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
28. AATK ENSGALG00000006901 1 1 - - - - - 1.000 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
29. ARHGEF17 6 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 17
30. FGA ENSGALG00000009266 291 1 - - - - - - - - - 1.000 fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
31. TEKT1 ENSGALG00000006064 18 1 - - - 1.000 - - - - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
32. ENSGALG00000024292 ENSGALG00000024292 2 1 - - 1.000 - - - - - - -
33. MTMR7 13 1 - - - - - - - - - 1.000 myotubularin related protein 7, transcript variant X1
34. ZNRF2 ENSGALG00000031163 0 1 - - - - - 1.000 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
35. PLEKHF1 ENSGALG00000004474 8 1 - - - - - - - - - 1.000 pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
36. NOXO1 ENSGALG00000005572 14 1 - - 1.000 - - - - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
37. BAFF BAFF 40 1 - - - - - 1.000 - - - -
38. PCDH7 ENSGALG00000033883 6 1 - - - - - - - - - 1.000 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
39. ENSGALG00000018626 ENSGALG00000018626 1 1 - - - - - - - - - 1.000
40. GPR65 ENSGALG00000010595 2 1 - - - - - - - - - 1.000 G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
41. SH3PXD2B ENSGALG00000002831 7 1 - - 1.000 - - - - - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
42. PAPOLG ENSGALG00000007853 1 1 - - 1.000 - - - - - - - poly(A) polymerase gamma [Source:HGNC Symbol;Acc:HGNC:14982]
43. SLC13A1 ENSGALG00000008874 2 1 - - - - - - - - - 1.000 solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
44. TMEM163 ENSGALG00000012190 72 1 - - - - - 1.000 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
45. VSTM2A ENSGALG00000041764 2 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
46. LNX2 LNX2 4 1 - - - - - - - - - 1.000
47. SLC16A3 ENSGALG00000002728 323 1 - - 1.000 - - - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
48. ATG7 ENSGALG00000004932 8 1 - - - - - - - - - 1.000 autophagy related 7 [Source:NCBI gene;Acc:415961]
49. gga-mir-10a ENSGALG00000021952 4 1 - - - - - 1.000 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
50. COQ2 ENSGALG00000041294 25 1 - - - 1.000 - - - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
51. ERI3 ENSGALG00000010106 995 1 - - - - - 1.000 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
52. DLGAP2 ENSGALG00000032937 2 1 - - 1.000 - - - - - - - DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
53. ENSGALG00000014888 ENSGALG00000014888 3 1 - - 1.000 - - - - - - -
54. TSHB ENSGALG00000002550 0 1 - - - 1.000 - - - - - - thyroid stimulating hormone beta [Source:NCBI gene;Acc:395937]
55. ADAM33 ENSGALG00000030602 7 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
56. WFDC2 ENSGALG00000031164 37 1 - - - - - 1.000 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
57. ENSGALG00000021836 ENSGALG00000021836 1 1 - - 1.000 - - - - - - -
58. GRID2 ENSGALG00000010397 6 1 - - - 1.000 - - - - - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
59. LRRC58 ENSGALG00000033186 15 1 - - - - - - - - - 1.000 leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
60. INHBB ENSGALG00000028770 2 1 - - - 1.000 - - - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
61. MARCO ENSGALG00000012119 5 1 - - - - - - - - - 1.000 macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
62. FKHR FKHR 1 1 - - - - - 1.000 - - - -
63. RBKS ENSGALG00000010043 3 1 - - - - - - - - - 1.000 ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
64. ENSGALG00000002444 ENSGALG00000002444 4 1 - - 1.000 - - - - - - -
65. RHBDF2 ENSGALG00000001943 1 1 - - - - - 1.000 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
66. WDR41 ENSGALG00000004350 16 1 - - - - - 1.000 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
67. ATP6V0D1 ENSGALG00000002237 13 1 - - - - - - - - - 1.000 ATPase H+ transporting V0 subunit d1 [Source:NCBI gene;Acc:415674]
68. GAMT ENSGALG00000040182 5 1 - - - - - 1.000 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
69. FBXO43 ENSGALG00000038940 7 1 - - - - - - - - - 1.000 F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
70. ENSGALG00000010376 ENSGALG00000010376 1 1 - - 1.000 - - - - - - -
71. gga-mir-133a-2 ENSGALG00000018293 1 1 - - 1.000 - - - - - - - gga-mir-133a-2 [Source:miRBase;Acc:MI0001248]
72. HOXD9 ENSGALG00000027513 89 1 - - - - - - - - - 1.000 homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
73. GBE ENSGALG00000011859, ENSGALG00000028016 2 1 - - - - - 1.000 - - - - eye-globin, transcript variant X3
74. C9orf152 C9orf152 3 1 - - 1.000 - - - - - - -
75. PPM1F ENSGALG00000039121 26 1 - - - - - 1.000 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
76. NME4 ENSGALG00000002688 1 1 - - - - - 1.000 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
77. KDM1B ENSGALG00000012685 11 1 - - 1.000 - - - - - - - lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
78. C1H7ORF60 C1H7ORF60 3 1 - - - - - 1.000 - - - -
79. SLC4A2 ENSGALG00000034284 3 1 - - - - - - - - - 1.000 solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
80. IL17REL ENSGALG00000008554 5 1 - - 1.000 - - - - - - - interleukin 17 receptor E like [Source:HGNC Symbol;Acc:HGNC:33808]
81. FLI1 ENSGALG00000001161 2 1 - - - 1.000 - - - - - - Fli-1 proto-oncogene, ETS transcription factor [Source:NCBI gene;Acc:419723]
82. GDNF ENSGALG00000003716 7 1 - - - 1.000 - - - - - - glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
83. PSTPIP1 ENSGALG00000002786 9 1 - - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
84. FXR FXR 52 1 - - - 1.000 - - - - - -
85. RIT2 ENSGALG00000033353 3 1 - - 1.000 - - - - - - - Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]
86. CACNA1H ENSGALG00000005215 110 1 - - - - - - - - - 1.000 calcium voltage-gated channel subunit alpha1 H [Source:HGNC Symbol;Acc:HGNC:1395]
87. C20orf85 ENSGALG00000027484 3 1 - - - - - - - - - 1.000 chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
88. ENSGALG00000002252 ENSGALG00000002252 19 1 - - - - - - - - - 1.000
89. PGBD5 ENSGALG00000011111 1 1 - - - 1.000 - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
90. CCDC60 ENSGALG00000046262 0 1 - - - 1.000 - - - - - - coiled-coil domain containing 60 [Source:HGNC Symbol;Acc:HGNC:28610]
91. ADCY1 ENSGALG00000031170 4 1 - - - - - - - - - 1.000 adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
92. COR7A COR7A 3 1 - - 1.000 - - - - - - -
93. LY96 ENSGALG00000032701 18 1 - - 1.000 - - - - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
94. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - - - - 1.000
95. ENSGALG00000010657 ENSGALG00000010657 1 1 - - 1.000 - - - - - - -
96. SLC28A3 ENSGALG00000012593 131 1 - - 1.000 - - - - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
97. PABPN1L ENSGALG00000006242 3 1 - - - - - 1.000 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
98. TMEM259 ENSGALG00000002029 8 1 - - - - - - - - - 1.000 transmembrane protein 259 [Source:HGNC Symbol;Acc:HGNC:17039]
99. CBL ENSGALG00000029077 6 1 - - - - - 1.000 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
100. ENSGALG00000003611 ENSGALG00000003611 22 1 - - 1.000 - - - - - - -

There are 202 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA