Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LCOR

Gene Name Gene ID Reads Annotation
LCOR ENSGALG00000028512 30 ligand dependent nuclear receptor corepressor, transcript variant X16











Genes with expression patterns similar to LCOR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LCOR ENSGALG00000028512 30 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 ligand dependent nuclear receptor corepressor, transcript variant X16
2. SUSD4 ENSGALG00000009388 48 1.786 - - 0.895 - - - 0.891 - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
3. SLCO4C1 ENSGALG00000026768 30 1.732 - - 0.947 - - 0.785 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
4. TSPAN18 ENSGALG00000036901 14 1.664 - - 0.894 - - 0.770 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
5. ST6GALNAC3 ENSGALG00000009027 17 1.588 - - - - - 0.785 - - - 0.803 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
6. CELF2 ENSGALG00000034590 31 1.487 - - - - - - 0.760 - - 0.727 CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
7. LRRC56 ENSGALG00000041955 16 0.955 - - 0.955 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
8. ANKRD42 8 0.946 - - 0.946 - - - - - - - ankyrin repeat domain 42
9. SPTSSBL ENSGALG00000026131 70 0.946 - - 0.946 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
10. LHX6 ENSGALG00000001347 7 0.946 - - 0.946 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
11. MMP9 ENSGALG00000006992 78 0.944 - - 0.944 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
12. PSMD4 ENSGALG00000028505 16 0.944 - - 0.944 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
13. ENSGALG00000000407 ENSGALG00000000407 32 0.944 - - 0.944 - - - - - - -
14. IKBIP ENSGALG00000026284 31 0.943 - - 0.943 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
15. PLAG1 ENSGALG00000015407 17 0.943 - - 0.943 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
16. ENSGALG00000026975 ENSGALG00000026975 8 0.942 - - 0.942 - - - - - - -
17. MSANTD1 ENSGALG00000015628 154 0.941 - - - 0.941 - - - - - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
18. HOXA9 ENSGALG00000028983 9298 0.939 - - 0.939 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
19. DNAH7 ENSGALG00000007841 32 0.935 - - 0.935 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
20. ENSGALG00000021882 ENSGALG00000021882 63 0.935 - - 0.935 - - - - - - -
21. SATB2 ENSGALG00000008135 347 0.933 - - 0.933 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
22. LOC769139 ENSGALG00000026754 753 0.932 - - 0.932 - - - - - - - feather keratin 1-like, transcript variant X2
23. YDJC ENSGALG00000029198 14 0.932 - - 0.932 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
24. TMEM230 ENSGALG00000036876 55 0.927 - - 0.927 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
25. CYP3A4 ENSGALG00000004436 75 0.926 - - 0.926 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
26. SAMSN1 ENSGALG00000040926 88 0.921 - - 0.921 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
27. MTMR10 85 0.921 - - 0.921 - - - - - - - myotubularin related protein 10
28. ENSGALG00000029120 ENSGALG00000029120 73 0.918 - - 0.918 - - - - - - -
29. FNDC7 ENSGALG00000001983 24 0.917 - - 0.917 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
30. DSG2 ENSGALG00000015142 67 0.915 - - 0.915 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
31. ENSGALG00000006278 ENSGALG00000006278 202 0.908 - - 0.908 - - - - - - -
32. PRKCZ ENSGALG00000001270 12 0.908 - - 0.908 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
33. B3GNTL1 ENSGALG00000001433 22 0.899 - - 0.899 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
34. XYLT1 ENSGALG00000006757 169 0.899 - - 0.899 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
35. DAB2IP ENSGALG00000001419 100 0.899 - - 0.899 - - - - - - - DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
36. TIMP3_1 ENSGALG00000028627 24 0.898 - - - - - 0.898 - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
37. REEP2 ENSGALG00000017365 338 0.897 - - 0.897 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
38. ZBTB21 ENSGALG00000016147 13 0.897 - - 0.897 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
39. MDM2 ENSGALG00000009942 397 0.893 - - 0.893 - - - - - - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
40. DINB1 DINB1 113 0.89 - - 0.890 - - - - - - -
41. PLEKHJ1 ENSGALG00000000835 55 0.887 - - 0.887 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
42. ROGDI ENSGALG00000001841 313 0.88 - - 0.880 - - - - - - - rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
43. FAM105B 56 0.879 - - 0.879 - - - - - - - family with sequence similarity 105, member B, transcript variant X18
44. C1orf131 C1orf131 141 0.873 - - 0.873 - - - - - - -
45. NEIL3 ENSGALG00000010719 47 0.867 - - - - - - - - - 0.867 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
46. NSL1/DC31 NSL1/DC31 43 0.865 - - 0.865 - - - - - - -
47. LIN54 ENSGALG00000011133 75 0.864 - - 0.864 - - - - - - - lin-54 DREAM MuvB core complex component [Source:HGNC Symbol;Acc:HGNC:25397]
48. IQGAP1 ENSGALG00000030162 1047 0.862 - - 0.862 - - - - - - - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
49. MYT1L ENSGALG00000016384 147 0.861 - - 0.861 - - - - - - - myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
50. MBP ENSGALG00000013640 62 0.858 - - - - - - 0.858 - - - myelin basic protein [Source:NCBI gene;Acc:396217]
51. STK38 ENSGALG00000000523 44 0.857 - - 0.857 - - - - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
52. ITGB2 ENSGALG00000007511 46 0.857 - - 0.857 - - - - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
53. ITPKB ENSGALG00000009068 324 0.857 - - 0.857 - - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
54. C3ORF64 C3ORF64 49 0.857 - - 0.857 - - - - - - -
55. UBE3C ENSGALG00000006461 57 0.855 - - 0.855 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
56. CNTF ENSGALG00000026207 47 0.855 - - 0.855 - - - - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
57. AFTPH ENSGALG00000008828 21 0.855 - - 0.855 - - - - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
58. HNF4G ENSGALG00000042621 484 0.854 - - 0.854 - - - - - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
59. gga-mir-2954 ENSGALG00000026107 462 0.854 - - 0.854 - - - - - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
60. SUPT20H ENSGALG00000017047 59 0.852 - - 0.852 - - - - - - - SPT20 homolog, SAGA complex component [Source:NCBI gene;Acc:418896]
61. TPST2 ENSGALG00000005626 945 0.851 - - 0.851 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
62. KIF9 ENSGALG00000005517 70 0.851 - - 0.851 - - - - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
63. LOXL1 ENSGALG00000028247 672 0.85 - - 0.850 - - - - - - - lysyl oxidase like 1
64. WDR48 ENSGALG00000006052 3575 0.849 - - 0.849 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
65. TMEM159 ENSGALG00000027173 67 0.848 - - 0.848 - - - - - - - transmembrane protein 159 [Source:HGNC Symbol;Acc:HGNC:30136]
66. PDCD6IP ENSGALG00000033500 580 0.847 - - 0.847 - - - - - - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
67. TMEM150C ENSGALG00000011175 218 0.845 - - 0.845 - - - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
68. NMRK1 ENSGALG00000015156 88 0.844 - - 0.844 - - - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
69. CD109 ENSGALG00000015910 11 0.841 - - - - - 0.841 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
70. IGSF6 ENSGALG00000007059 25 0.84 - - - - - - 0.840 - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
71. AGRP ENSGALG00000002244 27 0.84 - - - - - - - - - 0.840 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
72. PPARGC1A ENSGALG00000042851 364 0.84 - - 0.840 - - - - - - - PPARG coactivator 1 alpha [Source:NCBI gene;Acc:422815]
73. LRRC8C ENSGALG00000006170 43 0.837 - - - - - - - - - 0.837 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
74. HTR2C ENSGALG00000005853 90 0.834 - - 0.834 - - - - - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
75. KIAA1549 ENSGALG00000012796 60 0.833 - - 0.833 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
76. SIRT1 ENSGALG00000002761 9028 0.833 - - 0.833 - - - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
77. ABHD14A 174 0.831 - - 0.831 - - - - - - - abhydrolase domain containing 14A
78. YIPF1 5945 0.83 - - 0.830 - - - - - - - Yip1 domain family member 1, transcript variant 4
79. ATP6V0E1 10 0.83 - - - - - - - - - 0.830 ATPase H+ transporting V0 subunit e1
80. PPM1H ENSGALG00000009805 3 0.83 - - - - - - - - - 0.830 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
81. ENSGALG00000016213 ENSGALG00000016213 33 0.83 - - - - - - - - - 0.830
82. HOXD11 ENSGALG00000039629 658 0.83 - - - - - - - - - 0.830 homeobox D11 [Source:NCBI gene;Acc:395328]
83. AGO2 ENSGALG00000040957 25 0.83 - - - - - - - - - 0.830 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
84. CYP2H1 CYP2H1 363 0.83 - - - - - - - - - 0.830
85. ENSGALG00000026657 ENSGALG00000026657 4 0.83 - - - - - - - - - 0.830
86. DNAAF1 ENSGALG00000003258 115 0.826 - - 0.826 - - - - - - - dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
87. MANSC4 32 0.826 - - - - - 0.826 - - - - MANSC domain containing 4, transcript variant X1
88. PLCL1 ENSGALG00000008113 23 0.826 - - - - - - - - - 0.826 phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
89. LCAT ENSGALG00000028928 484 0.825 - - - - - - - - - 0.825 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
90. MGST2 ENSGALG00000009803 427 0.822 - - 0.822 - - - - - - - microsomal glutathione S-transferase 2 [Source:HGNC Symbol;Acc:HGNC:7063]
91. KYNU ENSGALG00000012418 353 0.822 - - - - - - - - - 0.822 kynureninase, transcript variant X3
92. RPUSD2 ENSGALG00000041216 9 0.822 - - - - - - - - - 0.822 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
93. ADORA1 ENSGALG00000000168 43 0.821 - - - - - 0.821 - - - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
94. PDK1 ENSGALG00000013235 238 0.821 - - 0.821 - - - - - - - pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
95. LOC101747660 ENSGALG00000027822 4 0.821 - - - - - 0.821 - - - - uncharacterized LOC101747660
96. TRMT44 ENSGALG00000015594 1490 0.819 - - 0.819 - - - - - - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
97. ANKRD31 46 0.818 - - - - - 0.818 - - - - ankyrin repeat domain 31, transcript variant X2
98. CNST ENSGALG00000010649 18 0.817 - - - - - - - - - 0.817 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
99. IMPG2 ENSGALG00000015322 74 0.817 - - 0.817 - - - - - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
100. SLC12A8 ENSGALG00000012045 39 0.816 - - - - - - - - - 0.816 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]

There are 220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA