Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LCA5

Gene Name Gene ID Reads Annotation
LCA5 ENSGALG00000015878 160 LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]











Genes with expression patterns similar to LCA5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LCA5 ENSGALG00000015878 160 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
2. SLITRK4 ENSGALG00000007242 165 1.517 - - - - - 0.749 - 0.768 - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
3. ANO3 ENSGALG00000013311 16 0.958 - - - - - - - 0.958 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
4. SLC16A4 ENSGALG00000000417 168 0.958 - - - - - - - 0.958 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
5. CCDC28B ENSGALG00000003241 459 0.958 - - - - - - - 0.958 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
6. ZHX1 ENSGALG00000034999 21 0.957 - - - - - - - 0.957 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
7. EHF ENSGALG00000007817 11 0.957 - - - - - - - 0.957 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
8. AGO2 ENSGALG00000040957 25 0.957 - - - - - - - 0.957 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
9. FAM167B ENSGALG00000003301 11 0.957 - - - - - - - 0.957 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
10. IL6 ENSGALG00000010915 8 0.957 - - - - - - - 0.957 - - interleukin 6 [Source:NCBI gene;Acc:395337]
11. TTLL7 ENSGALG00000008850 49 0.957 - - - - - - - 0.957 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
12. IL15RA ENSGALG00000008153 3 0.957 - - - - - - - 0.957 - - interleukin 15 receptor, alpha, transcript variant X2
13. uc uc 37 0.957 - - - - - - - 0.957 - -
14. DCBLD1 ENSGALG00000014907 19 0.957 - - - - - - - 0.957 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
15. DUS4L ENSGALG00000023661 29 0.957 - - - - - - - 0.957 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
16. gga-mir-125b gga-mir-125b 146 0.954 - - - - - - - 0.954 - -
17. ASTN1 ENSGALG00000004472 855 0.953 - - - - - - - 0.953 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
18. MAPK8 ENSGALG00000006109 51 0.953 - - - - - - - 0.953 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
19. ARL16 49 0.941 - - - - - - - 0.941 - - ADP ribosylation factor like GTPase 16, transcript variant X1
20. UBE2O ENSGALG00000001971 77 0.937 - - - - - - - 0.937 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
21. MSL2 ENSGALG00000039294 55 0.935 - - - - - - - 0.935 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
22. ZBBX ENSGALG00000028207 59 0.928 - - - - - - - 0.928 - - zinc finger B-box domain containing, transcript variant X5
23. LEO1 ENSGALG00000004696 111 0.924 - - - - - - - 0.924 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
24. ENSGALG00000020578 ENSGALG00000020578 25 0.921 - - - - - - - 0.921 - -
25. FIP1L1 ENSGALG00000013943 15 0.919 - - - - - - - 0.919 - - factor interacting with PAPOLA and CPSF1, transcript variant X5
26. SNORD2 SNORD2 51 0.919 - - - - - - - 0.919 - -
27. CCDC84 ENSGALG00000007689 18 0.919 - - - - - - - 0.919 - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
28. PQLC3 ENSGALG00000016449 39 0.915 - - - - - - - 0.915 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
29. SIK2 ENSGALG00000036873 7 0.912 - - - - - - - 0.912 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
30. CCDC171 ENSGALG00000015103 349 0.908 - - - - - - - 0.908 - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
31. MXRA7 ENSGALG00000001805 945 0.902 - - - - - - - 0.902 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
32. SFMBT2 ENSGALG00000009279 125 0.894 - - - - - - - 0.894 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
33. DGKE ENSGALG00000003131 17 0.876 - - - - - - - 0.876 - - diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
34. TRAF3IP2 ENSGALG00000015026 26 0.875 - - - - - - - 0.875 - - TRAF3 interacting protein 2, transcript variant X1
35. DUSP11 DUSP11 765 0.874 - - - - - - - 0.874 - -
36. ENSGALG00000026422 ENSGALG00000026422 34 0.873 - - - - - - - 0.873 - -
37. PARP8 ENSGALG00000032991 17 0.872 - - - - - - - 0.872 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
38. SNCG1 SNCG1 56 0.87 - - - - - - - 0.870 - -
39. AZI2 ENSGALG00000011428 24 0.866 - - - - - - - 0.866 - - 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
40. NEFM ENSGALG00000000317 6992 0.865 - - - - - - - 0.865 - - neurofilament medium [Source:NCBI gene;Acc:396206]
41. CFTR ENSGALG00000032986 424 0.859 - - - - - - - 0.859 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
42. CCDC71 ENSGALG00000006787 48 0.844 - - - - - - - 0.844 - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
43. KLHL42 ENSGALG00000017296 62 0.844 - - - - - - - 0.844 - - kelch like family member 42 [Source:HGNC Symbol;Acc:HGNC:29252]
44. ARFGEF1 ENSGALG00000034610 238 0.842 - - - - - - - 0.842 - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
45. C1H13ORF27 C1H13ORF27 635 0.833 - - - - - - - 0.833 - -
46. LYST ENSGALG00000032840 96 0.832 - - - - - - - 0.832 - - lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]
47. RTKN2 ENSGALG00000002980 50 0.829 - - - - - 0.829 - - - - rhotekin 2 [Source:NCBI gene;Acc:423660]
48. SLC12A8 ENSGALG00000012045 39 0.829 - - - - - 0.829 - - - - solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
49. MCMBP ENSGALG00000009455 90 0.826 - - - - - - - 0.826 - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
50. KIAA1244 KIAA1244 62 0.826 - - - - - - - 0.826 - -
51. TJP3 ENSGALG00000000748 45 0.82 - - - - - - - 0.820 - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
52. PBLD ENSGALG00000003935 105 0.819 - - - - - - - 0.819 - - phenazine biosynthesis like protein domain containing [Source:NCBI gene;Acc:423685]
53. TMEM80 ENSGALG00000045337 775 0.817 - - - - - - - 0.817 - - transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]
54. TAOK1 ENSGALG00000004082 77 0.815 - - - - - 0.815 - - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
55. FAM150B 44 0.815 - - - - - 0.815 - - - - family with sequence similarity 150 member B, transcript variant X2
56. PROCR ENSGALG00000006547 645 0.815 - - - - - - - 0.815 - - protein C receptor [Source:NCBI gene;Acc:424867]
57. NPY ENSGALG00000010983 441 0.814 - - - - - - - 0.814 - - neuropeptide Y [Source:NCBI gene;Acc:396464]
58. CCDC103 CCDC103 362 0.813 - - - - - - - 0.813 - -
59. ADAMTS15 ENSGALG00000001407 11 0.811 - - - - - 0.811 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
60. LIPML4 ENSGALG00000006302 2 0.811 - - - - - 0.811 - - - - lipase member M-like 4
61. EGF ENSGALG00000012155 8 0.811 - - - - - 0.811 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
62. GAK ENSGALG00000015352 99 0.811 - - - - - 0.811 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
63. PIK3R4 ENSGALG00000040917 10 0.811 - - - - - 0.811 - - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
64. ENSGALG00000011449 ENSGALG00000011449 2 0.811 - - - - - 0.811 - - - -
65. CRYAA ENSGALG00000016199 12 0.811 - - - - - 0.811 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
66. TOR3A ENSGALG00000004216 1 0.811 - - - - - 0.811 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
67. ENSGALG00000021517 ENSGALG00000021517 7 0.811 - - - - - 0.811 - - - -
68. CAPN3 ENSGALG00000009050 3 0.811 - - - - - 0.811 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
69. SMC1B ENSGALG00000014228 19 0.811 - - - - - 0.811 - - - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
70. ELMOD2 ENSGALG00000009836 177 0.81 - - - - - - - 0.810 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
71. PDLIM3 ENSGALG00000013414 52 0.808 - - - - - - - 0.808 - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
72. PBEF1 PBEF1 25 0.804 - - - - - 0.804 - - - -
73. FANCI ENSGALG00000006658 908 0.798 - - - - - - - 0.798 - - Fanconi anemia complementation group I [Source:NCBI gene;Acc:415491]
74. RND2 ENSGALG00000002804 9 0.797 - - - - - - - 0.797 - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
75. TNRC6B ENSGALG00000012050 613 0.797 - - - - - - - 0.797 - - trinucleotide repeat containing 6B, transcript variant X10
76. COQ2 ENSGALG00000041294 25 0.797 - - - - - 0.797 - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
77. ANKRD40L ENSGALG00000026189 887 0.793 - - - - - 0.793 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
78. HOXB13 ENSGALG00000033154 71 0.792 - - - - - 0.792 - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
79. INADL INADL 51 0.791 - - - - - - - 0.791 - -
80. KCNS3 ENSGALG00000016470 4 0.79 - - - - - 0.790 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
81. NPY7R ENSGALG00000021303 215 0.788 - - - - - - - 0.788 - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
82. BMP2 ENSGALG00000029301 379 0.787 - - - - - - - 0.787 - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
83. EXOC1 ENSGALG00000013778 93 0.786 - - - - - - - 0.786 - - exocyst complex component 1 [Source:HGNC Symbol;Acc:HGNC:30380]
84. TSPAN2 ENSGALG00000002554 32 0.785 - - - - - - - 0.785 - - tetraspanin 2 [Source:HGNC Symbol;Acc:HGNC:20659]
85. CRYBA4 ENSGALG00000005634 56 0.785 - - - - - 0.785 - - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
86. TLR15 ENSGALG00000008166 29 0.785 - - - - - 0.785 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
87. ENSGALG00000027164 ENSGALG00000027164 8 0.783 - - - - - 0.783 - - - -
88. ATRN ENSGALG00000016034 16 0.783 - - - - - 0.783 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
89. RASA1 ENSGALG00000017706 224 0.78 - - - - - - - 0.780 - - RAS p21 protein activator 1
90. ENSGALG00000027367 ENSGALG00000027367 7 0.778 - - - - - 0.778 - - - -
91. PLK3 ENSGALG00000010129 933 0.777 - - - - - - - 0.777 - - polo like kinase 3 [Source:HGNC Symbol;Acc:HGNC:2154]
92. NCAPD3 ENSGALG00000001491 221 0.776 - - - - - - - 0.776 - - non-SMC condensin II complex subunit D3, transcript variant X3
93. SLC22A18 ENSGALG00000006454 24 0.776 - - - - - 0.776 - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
94. GRAP2 ENSGALG00000012056 16 0.773 - - - - - 0.773 - - - - GRB2-related adaptor protein 2, transcript variant X3
95. ZFPM2 ENSGALG00000040079 942 0.773 - - - - - - - 0.773 - - zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
96. IKZF1 ENSGALG00000013086 58 0.773 - - - - - 0.773 - - - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
97. PKD2 ENSGALG00000010921 55 0.771 - - - - - 0.771 - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
98. DDI2 115 0.771 - - - - - - - 0.771 - - DNA damage inducible 1 homolog 2, transcript variant X2
99. RGS10 ENSGALG00000009422 10 0.77 - - - - - - - 0.770 - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
100. MIS18BP1 ENSGALG00000012452 1358 0.769 - - - - - 0.769 - - - - MIS18 binding protein 1

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA