Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LBP

Gene Name Gene ID Reads Annotation
LBP ENSGALG00000006756 1684 lipopolysaccharide binding protein, transcript variant X1











Genes with expression patterns similar to LBP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LBP ENSGALG00000006756 1684 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lipopolysaccharide binding protein, transcript variant X1
2. FBXL8 ENSGALG00000003201 847 1.674 - - - - - - - 0.948 0.726 - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
3. SH3TC1 ENSGALG00000015568 484 1.67 - - - - - - - 0.931 - 0.739 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
4. ARPC1B ENSGALG00000032588 2407 1.449 - - 0.737 - - - - - 0.712 - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
5. ERMARD ENSGALG00000011186 1001 0.954 - - - - - - - 0.954 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
6. MMP15 ENSGALG00000038758 49988 0.953 - - - - - - - 0.953 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
7. ENSGALG00000018634 ENSGALG00000018634 414 0.95 - - - - - - - 0.950 - -
8. EFCAB10 ENSGALG00000045949 514 0.945 - - - - - - - 0.945 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
9. AGRN ENSGALG00000039193 8135 0.944 - - - - - - - 0.944 - - agrin [Source:NCBI gene;Acc:396538]
10. GP1BB ENSGALG00000021529 348 0.943 - - - - - - - 0.943 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
11. SELENBP1 ENSGALG00000000866 1253 0.94 - - - - - - - 0.940 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
12. LRIG3 ENSGALG00000009755 6655 0.938 - - - - - - - 0.938 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
13. ANGPTL1 ENSGALG00000004290 1922 0.937 - - - - - - - 0.937 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
14. AGGF1 ENSGALG00000004311 3011 0.936 - - - - - - - 0.936 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
15. NPL ENSGALG00000004614 617 0.934 - - - - - - - 0.934 - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
16. HYAL1 ENSGALG00000000785 1778 0.934 - - - - - - - 0.934 - - hyaluronoglucosaminidase 1, transcript variant X3
17. TNFRSF1B ENSGALG00000034213 780 0.932 - - - - - - - 0.932 - - TNF receptor superfamily member 1B [Source:NCBI gene;Acc:395083]
18. PCYOX1 ENSGALG00000013878 2200 0.931 - - - - - - - 0.931 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
19. MTUS1 ENSGALG00000013615 1040 0.929 - - - - - - - 0.929 - - microtubule associated tumor suppressor 1, transcript variant X4
20. PKN3 532 0.929 - - - - - - - 0.929 - - protein kinase N3, transcript variant X2
21. RPS6KL1 971 0.929 - - - - - - - 0.929 - - ribosomal protein S6 kinase like 1, transcript variant X8
22. APBB2 ENSGALG00000014262 569 0.927 - - - - - - - 0.927 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
23. TPM3 ENSGALG00000013537 934 0.925 - - - - - - - 0.925 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
24. RBM46 ENSGALG00000009278 98 0.925 - - - - - - - 0.925 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
25. CCDC80 ENSGALG00000015193 1387 0.924 - - - - - - - 0.924 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
26. RFX7 ENSGALG00000041896 69 0.923 - - - - - - - 0.923 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
27. DMA DMA 1012 0.923 - - - - - - - 0.923 - -
28. TRPC1 ENSGALG00000002639 296 0.923 - - - - - - - 0.923 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
29. ACSS2 ENSGALG00000003362 3023 0.923 - - - - - - - 0.923 - - acyl-CoA synthetase short chain family member 2 [Source:HGNC Symbol;Acc:HGNC:15814]
30. SPATA2L ENSGALG00000044991 463 0.923 - - - - - - - 0.923 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
31. MXD4 ENSGALG00000015688 1472 0.922 - - - - - - - 0.922 - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
32. ENSGALG00000011233 ENSGALG00000011233 42 0.922 - - - - - - - 0.922 - -
33. PAIP1 ENSGALG00000014867 202 0.922 - - - - - - - 0.922 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
34. NPR2 ENSGALG00000027630 871 0.92 - - - - - - - 0.920 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
35. CRABP2 ENSGALG00000029140 559 0.92 - - - - - - - 0.920 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
36. KIAA1009 KIAA1009 1261 0.92 - - - - - - - 0.920 - -
37. TCTN2 ENSGALG00000023683 3596 0.92 - - - - - - - 0.920 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
38. SRR ENSGALG00000003155 93 0.92 - - - - - - - 0.920 - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
39. ZBTB18 ENSGALG00000010705 3433 0.919 - - - - - - - 0.919 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
40. SMG8 ENSGALG00000005093 5557 0.918 - - - - - - - 0.918 - - SMG8 nonsense mediated mRNA decay factor
41. NRG1 ENSGALG00000015422 196 0.917 - - - - - - - 0.917 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
42. GKAP1 ENSGALG00000012586 2908 0.917 - - - - - - - 0.917 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
43. MAOB ENSGALG00000032836 1054 0.917 - - - - - - - 0.917 - - monoamine oxidase B
44. ENSGALG00000021439 ENSGALG00000021439 628 0.917 - - - - - - - 0.917 - -
45. ZNF384 ENSGALG00000032599 2369 0.916 - - - - - - - 0.916 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
46. ABHD12B ENSGALG00000020342 511 0.916 - - - - - - - 0.916 - - abhydrolase domain containing 12B, transcript variant X2
47. CREBL2 ENSGALG00000037030 1247 0.916 - - - - - - - 0.916 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
48. CLCN5 ENSGALG00000007234 1143 0.916 - - - - - - - 0.916 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
49. SPATA2 ENSGALG00000008026 2040 0.914 - - - - - - - 0.914 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
50. TXNDC11 ENSGALG00000003154 2224 0.913 - - - - - - - 0.913 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
51. ITFG2 ENSGALG00000014335 1896 0.912 - - - - - - - 0.912 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
52. NUDT6 ENSGALG00000011834 1309 0.912 - - - - - - - 0.912 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
53. ZNF750 ENSGALG00000001518 151 0.911 - - - - - - - 0.911 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
54. RIMKLB ENSGALG00000040184 281 0.911 - - - - - - - 0.911 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
55. CCDC117 ENSGALG00000005784 185 0.911 - - - - - - - 0.911 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
56. HAGHL ENSGALG00000021040 1568 0.91 - - - - - - - 0.910 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
57. ASTN2 ENSGALG00000007038 1748 0.91 - - - - - - - 0.910 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
58. EML1 1941 0.91 - - - - - - - 0.910 - - echinoderm microtubule associated protein like 1, transcript variant X11
59. KLF6 ENSGALG00000033178 679 0.909 - - - - - - - 0.909 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
60. SLC25A28 ENSGALG00000007479 4902 0.908 - - - - - - - 0.908 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
61. EDN1 ENSGALG00000012735 654 0.906 - - - - - - - 0.906 - - endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]
62. BUD13_1 ENSGALG00000025882 1118 0.903 - - - - - - - 0.903 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
63. CPT2 ENSGALG00000010681 3211 0.902 - - - - - - - 0.902 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
64. UBN1 ENSGALG00000031416 2848 0.902 - - - - - - - 0.902 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
65. MTIF2 ENSGALG00000031265 2366 0.901 - - - - - - - 0.901 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
66. ITFG1 ENSGALG00000004049 2934 0.901 - - - - - - - 0.901 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
67. ARNTL2 ENSGALG00000014096 998 0.9 - - - - - - - 0.900 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
68. ENTPD4 ENSGALG00000000390 1394 0.9 - - - - - - - 0.900 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
69. NMB ENSGALG00000043506 1387 0.899 - - - - - - - 0.899 - - neuromedin B [Source:NCBI gene;Acc:415333]
70. CLMP ENSGALG00000006507 8079 0.898 - - - - - - - 0.898 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
71. BUD13 ENSGALG00000025882 1800 0.896 - - - - - - - 0.896 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
72. GNG12 ENSGALG00000026591 5817 0.895 - - - - - - - 0.895 - - G protein subunit gamma 12, transcript variant X21
73. PDZD8 ENSGALG00000029095 1068 0.895 - - - - - - - 0.895 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
74. EPGN ENSGALG00000010859 187 0.893 - - - - - - - 0.893 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
75. HOOK1 ENSGALG00000010889 1007 0.893 - - - - - - - 0.893 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
76. TMEM161A ENSGALG00000025809 2813 0.886 - - - - - - - 0.886 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
77. TICAM1 ENSGALG00000026850 723 0.885 - - - - - - - 0.885 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
78. BRCA1 ENSGALG00000002781 2052 0.883 - - - - - - - 0.883 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
79. BACE2 ENSGALG00000034932 1570 0.882 - - - - - - - 0.882 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
80. PNN ENSGALG00000010167 6417 0.881 - - - - - - - 0.881 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
81. NPAT ENSGALG00000017162 1574 0.881 - - - - - - - 0.881 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
82. TTC8 ENSGALG00000010663 1556 0.88 - - - - - - - 0.880 - - tetratricopeptide repeat domain 8 [Source:HGNC Symbol;Acc:HGNC:20087]
83. ATP1B3 ENSGALG00000002764 1890 0.879 - - - - - - - 0.879 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
84. RASA3 ENSGALG00000016817 2146 0.879 - - - - - - - 0.879 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
85. KIF21B ENSGALG00000034347 4144 0.879 - - - - - - - 0.879 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
86. AIP ENSGALG00000040247 4166 0.878 - - - - - - - 0.878 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
87. CRTAP ENSGALG00000034163 6453 0.877 - - - - - - - 0.877 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
88. PECR ENSGALG00000011497 1714 0.877 - - - - - - - 0.877 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
89. C9H21ORF2 C9H21ORF2 3161 0.875 - - - - - - - 0.875 - -
90. PHF2 ENSGALG00000039208 2003 0.875 - - - - - - - 0.875 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
91. AKAP2 ENSGALG00000015656 4310 0.873 - - - - - - - - 0.873 - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
92. PLDN PLDN 1803 0.87 - - - - - - - 0.870 - -
93. VPS13D ENSGALG00000034777 2350 0.867 - - - - - - - 0.867 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
94. TAF1A ENSGALG00000009441 2431 0.867 - - - - - - - 0.867 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
95. G2E3 ENSGALG00000009907 1754 0.866 - - - - - - - 0.866 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
96. TTC38 ENSGALG00000014551 1135 0.866 - - - - - - - 0.866 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
97. FGFR1 ENSGALG00000039786 4480 0.865 - - - - - - - 0.865 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
98. RCAN3 ENSGALG00000004282 7778 0.864 - - - - - - - 0.864 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
99. USP28 ENSGALG00000006969 2645 0.864 - - - - - - - 0.864 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
100. SLC19A1 ENSGALG00000030511 1397 0.862 - - - - - - - 0.862 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA