Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LBH

Gene Name Gene ID Reads Annotation
LBH ENSGALG00000009052 5545 limb bud and heart development [Source:NCBI gene;Acc:421301]











Genes with expression patterns similar to LBH

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LBH ENSGALG00000009052 5545 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 limb bud and heart development [Source:NCBI gene;Acc:421301]
2. SLC12A4 ENSGALG00000034179 5674 1.581 - - 0.832 - - - - 0.749 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
3. KDM6A ENSGALG00000016217 2302 1.542 - - 0.768 - - - - 0.774 - - lysine demethylase 6A, transcript variant X14
4. FAR-1 FAR-1 1855 1.502 - - 0.723 - - - - 0.779 - -
5. STRBP ENSGALG00000029927 3516 1.501 - - 0.744 - - - 0.757 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
6. SHMT1 ENSGALG00000005046 1430 1.469 - - 0.727 - - - - 0.742 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
7. SETD1B ENSGALG00000004324 2897 1.452 - - 0.713 - - - 0.739 - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
8. RBPMS_1 ENSGALG00000010291 16146 0.865 - - - - - - - - 0.865 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
9. CXCL12 ENSGALG00000041346 4128 0.844 - - - - - - - 0.844 - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
10. CD99 ENSGALG00000024488 10058 0.843 - - - - - - - - 0.843 - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
11. CSRP3 ENSGALG00000004044 456 0.841 0.841 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
12. SP3 ENSGALG00000031796 8997 0.825 - - 0.825 - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
13. PGS1 ENSGALG00000007181 3187 0.821 - - 0.821 - - - - - - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
14. MSN ENSGALG00000039615 383 0.812 - - - - - - - - 0.812 - moesin [Source:NCBI gene;Acc:422173]
15. ACTC1 ENSGALG00000009844 20914 0.812 0.812 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
16. MYL3 ENSGALG00000005448 3379 0.809 0.809 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
17. TNNC1 ENSGALG00000001459 7110 0.808 0.808 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
18. MYL2 ENSGALG00000004582 2245 0.807 0.807 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
19. CHD9 ENSGALG00000039178 1168 0.806 - - 0.806 - - - - - - - chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
20. HSPB2 ENSGALG00000040842 197 0.805 0.805 - - - - - - - - - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
21. TPM4 ENSGALG00000002563 15621 0.8 0.800 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
22. ZSWIM5 ENSGALG00000010221 2326 0.796 - - 0.796 - - - - - - - zinc finger SWIM-type containing 5
23. RAPGEF2 ENSGALG00000020249 2515 0.796 - - - - - - 0.796 - - - Rap guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:16854]
24. ABCE1 ENSGALG00000009961 958 0.796 - - 0.796 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
25. C5H15ORF29 C5H15ORF29 3709 0.796 - - - - - - - 0.796 - -
26. LOC417741 ENSGALG00000008635 594 0.793 - - - - - - - 0.793 - - secreted frizzled-related protein 2-like
27. GON4L ENSGALG00000014643 1737 0.792 - - 0.792 - - - - - - - gon-4 like, transcript variant X2
28. gga-mir-7474 ENSGALG00000033766 5727 0.792 0.792 - - - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
29. FBLN1 ENSGALG00000014233 5062 0.791 - - - - - - 0.791 - - - fibulin 1 [Source:NCBI gene;Acc:373979]
30. SRD5A3 ENSGALG00000013804 4849 0.789 - - 0.789 - - - - - - - steroid 5 alpha-reductase 3 [Source:HGNC Symbol;Acc:HGNC:25812]
31. TNNI1 ENSGALG00000000313 4069 0.789 0.789 - - - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
32. IGSF21 ENSGALG00000037479 1105 0.788 - - - - - - - 0.788 - - immunoglobin superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:28246]
33. SOAT1 ENSGALG00000004205 2394 0.787 - - - - - - - - 0.787 - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
34. XPNPEP1 ENSGALG00000008523 2257 0.786 - - - - - - - - 0.786 - X-prolyl aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:12822]
35. WHSC1 1712 0.786 - - 0.786 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
36. SEPT2 ENSGALG00000005809 811 0.785 - - - - - - - - 0.785 - septin 2 [Source:HGNC Symbol;Acc:HGNC:7729]
37. GPR107 ENSGALG00000004052 3392 0.785 - - - - - - 0.785 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
38. SEPHS1 ENSGALG00000014575 10701 0.785 - - 0.785 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
39. PTPN2 ENSGALG00000013867 1128 0.784 - - 0.784 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
40. SLC37A3 ENSGALG00000012849 836 0.784 - - 0.784 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
41. SMAD1 ENSGALG00000009977 3540 0.784 - - 0.784 - - - - - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
42. HSPB7L ENSGALG00000028183 795 0.782 0.782 - - - - - - - - - heat shock protein beta-7-like
43. SMOC2 ENSGALG00000011205 340 0.782 - - 0.782 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
44. MBSP MBSP 5634 0.781 - - 0.781 - - - - - - -
45. ATP8B4 ENSGALG00000002326 456 0.781 - - 0.781 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
46. PIK3IP1 ENSGALG00000006942 8388 0.781 - - - - - - 0.781 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
47. PCYOX1 ENSGALG00000013878 2200 0.78 - - 0.780 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
48. TRIM55 ENSGALG00000041327 1097 0.78 0.780 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
49. TPRG1L ENSGALG00000001024 9809 0.78 - - - - - - 0.780 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
50. MLLT3 ENSGALG00000015078 502 0.779 - - 0.779 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
51. NGF ENSGALG00000002556 122 0.779 - - 0.779 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
52. EF1A EF1A 2378 0.778 0.778 - - - - - - - - -
53. RTFDC1 ENSGALG00000007709 1727 0.777 - - 0.777 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
54. PRUNE PRUNE 452 0.777 - - 0.777 - - - - - - -
55. C1H12ORF4 2696 0.777 - - 0.777 - - - - - - - chromosome 1 open reading frame, human C12orf4
56. ELOVL7 ENSGALG00000014730 1820 0.777 - - - - - - - - 0.777 - ELOVL fatty acid elongase 7 [Source:NCBI gene;Acc:431579]
57. SLC3A1 ENSGALG00000009973 608 0.776 - - 0.776 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
58. ADK ENSGALG00000005057 199 0.776 - - 0.776 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
59. CTNNA3 ENSGALG00000002845 127 0.776 0.776 - - - - - - - - - catenin alpha 3 [Source:NCBI gene;Acc:423648]
60. RBP5 ENSGALG00000014662 31268 0.775 - - - - - - 0.775 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
61. SCRN3 ENSGALG00000031751 1152 0.775 - - - - - - 0.775 - - - secernin 3 [Source:NCBI gene;Acc:426472]
62. IFT81 ENSGALG00000003854 2534 0.774 - - 0.774 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
63. RAD54L2 ENSGALG00000003243 187 0.774 - - 0.774 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
64. BBS5 ENSGALG00000009846 344 0.774 - - 0.774 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
65. GSDMA ENSGALG00000013495 1650 0.773 - - 0.773 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
66. CDC5L ENSGALG00000016704 22893 0.773 - - 0.773 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
67. METTL5 ENSGALG00000009676 3252 0.773 - - 0.773 - - - - - - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
68. TUBGCP3 ENSGALG00000016836 332 0.772 - - 0.772 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
69. RRN3 ENSGALG00000041989 3934 0.771 - - 0.771 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
70. SGCE ENSGALG00000009670 3070 0.771 - - 0.771 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
71. DUSP19 ENSGALG00000043268 5543 0.771 - - 0.771 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
72. POPDC2 ENSGALG00000014988 281 0.77 0.770 - - - - - - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
73. INCENP ENSGALG00000007537 16617 0.77 - - - - - - - 0.770 - - inner centromere protein [Source:NCBI gene;Acc:396270]
74. YBX3 ENSGALG00000031890 819 0.77 - - 0.770 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
75. ACTN2 ENSGALG00000014463 1724 0.77 0.770 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
76. MYH7B ENSGALG00000030985 199 0.769 0.769 - - - - - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
77. AKAP10 ENSGALG00000004679 103 0.769 - - 0.769 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
78. NPM1 ENSGALG00000002197 24109 0.769 - - 0.769 - - - - - - - nucleophosmin [Source:NCBI gene;Acc:396203]
79. CTNS ENSGALG00000004628 1358 0.768 - - 0.768 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
80. HYAL3 ENSGALG00000029000 712 0.768 - - 0.768 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
81. ABCC3 ENSGALG00000007522 340 0.768 - - 0.768 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
82. TFAP2C ENSGALG00000007690 768 0.768 - - 0.768 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
83. NXPE3 ENSGALG00000015344 111 0.768 - - 0.768 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
84. ZFAND5 ENSGALG00000015144 9053 0.768 - - - - - - - 0.768 - - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
85. LASP-2 LASP-2 4415 0.768 0.768 - - - - - - - - -
86. SZT2 ENSGALG00000028561 255 0.767 - - 0.767 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
87. PTDSS2 ENSGALG00000004300 682 0.767 - - 0.767 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
88. PRPF38B ENSGALG00000001972 2009 0.767 - - 0.767 - - - - - - - pre-mRNA processing factor 38B
89. ENSGALG00000004931 ENSGALG00000004931 2737 0.767 - - 0.767 - - - - - - -
90. ELMOD1 ENSGALG00000017169 2303 0.766 - - - - - - - 0.766 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
91. BBX ENSGALG00000015353 1281 0.766 - - 0.766 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
92. PICK1 ENSGALG00000041823 3843 0.766 - - 0.766 - - - - - - - protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:HGNC:9394]
93. NUBP1 ENSGALG00000007241 3791 0.766 - - 0.766 - - - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
94. HIGD1A ENSGALG00000030775 5724 0.766 - - - - - - - 0.766 - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
95. EDNRB ENSGALG00000016912 2851 0.766 - - - - - - - 0.766 - - endothelin receptor type B [Source:NCBI gene;Acc:408082]
96. KCTD3 ENSGALG00000009678 335 0.765 - - 0.765 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
97. ACP6 ENSGALG00000015485 3147 0.765 - - - - - - 0.765 - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
98. ENSGALG00000020103 ENSGALG00000020103 64 0.765 - - 0.765 - - - - - - -
99. RBM24 ENSGALG00000012712 4138 0.764 0.764 - - - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
100. FBXL5 ENSGALG00000014510 245 0.764 - - 0.764 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]

There are 315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA