Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LARS

Gene Name Gene ID Reads Annotation
LARS ENSGALG00000007494 13966 leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]











Genes with expression patterns similar to LARS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LARS ENSGALG00000007494 13966 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
2. STK3 ENSGALG00000032850 6339 2.414 - - 0.723 - - - 0.987 0.704 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
3. GFPT1 ENSGALG00000036391 14025 1.781 - - - 0.803 - - 0.978 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
4. SYNCRIP ENSGALG00000015830 30555 1.771 - - 0.805 - - - 0.966 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
5. PPP1R8 ENSGALG00000000729 11797 1.76 - - - - - - 0.981 0.779 - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
6. SSR1 ENSGALG00000012798 62626 1.745 - - - - - - 0.979 0.766 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
7. EIF5B ENSGALG00000016764 30681 1.745 - - - - - - 0.979 0.766 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
8. PCNA ENSGALG00000029292 19163 1.744 - - - - - - 0.979 0.765 - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
9. USP34 ENSGALG00000004455 6667 1.736 - - - - - - 0.978 0.758 - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
10. PPP1CB ENSGALG00000010026 6909 1.73 - - - 0.753 - - 0.977 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
11. CCDC47 ENSGALG00000000564 6584 1.723 - - - 0.745 - - 0.978 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
12. TRIM37 ENSGALG00000005084 4036 1.716 - - 0.740 - - - 0.976 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
13. SH2D3C ENSGALG00000005036 5101 1.715 - - - - - - 0.977 0.738 - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
14. POGZ ENSGALG00000036365 4056 1.712 - - - 0.736 - - 0.976 - - - pogo transposable element with ZNF domain, transcript variant X2
15. C-MET C-MET 1650 1.697 - - 0.722 - - - 0.975 - - -
16. PHF2 ENSGALG00000039208 2003 1.61 - - 0.768 0.842 - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
17. STRN3 ENSGALG00000040464 9045 1.609 - - 0.849 - - - - 0.760 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
18. ST5 6869 1.582 - - 0.791 0.791 - - - - - - suppression of tumorigenicity 5, transcript variant X1
19. WIPI2 ENSGALG00000004557 4961 1.581 - - - 0.806 - - - 0.775 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
20. SCPEP1 ENSGALG00000003185 2322 1.573 - - 0.764 0.809 - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
21. KIAA1143 ENSGALG00000035952 6735 1.57 - - - 0.843 - - - 0.727 - - KIAA1143 [Source:NCBI gene;Acc:420709]
22. UTP18 ENSGALG00000002985 7129 1.563 - - - 0.853 - - - 0.710 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
23. ENSGALG00000007514 ENSGALG00000007514 4866 1.561 - - - 0.809 - - - 0.752 - -
24. SSR2 ENSGALG00000000764 32190 1.56 - - - 0.796 - - - 0.764 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
25. DPY30 ENSGALG00000010621 6818 1.559 - - - 0.856 - - - 0.703 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
26. PFKL ENSGALG00000006543 4361 1.558 - - - 0.813 - - - 0.745 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
27. PPFIA1 ENSGALG00000035774 5258 1.552 - - - 0.803 - - - 0.749 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
28. EMC3 ENSGALG00000003738 10363 1.531 - - - 0.731 - - - 0.800 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
29. ATR ENSGALG00000002663 4626 1.529 - - - 0.755 - - - 0.774 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
30. METTL11A METTL11A 11876 1.522 - - 0.776 - - - - 0.746 - -
31. CACYBP ENSGALG00000004554 7320 1.522 - - - 0.812 - - - 0.710 - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
32. NXT2 ENSGALG00000008092 2477 1.52 - - 0.809 - - - - - 0.711 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
33. CDC42BPB ENSGALG00000011432 8220 1.52 - - - 0.762 - - - 0.758 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
34. MAP1B ENSGALG00000014999 6288 1.517 - - 0.773 - - - - 0.744 - - microtubule associated protein 1B
35. C5orf22 ENSGALG00000012909 3537 1.507 - - - 0.771 - - - - 0.736 - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
36. DSCR3 3583 1.493 - - 0.707 - - - - 0.786 - - DSCR3 arrestin fold containing, transcript variant X1
37. FAM133B 9239 1.492 - - - 0.770 - - - 0.722 - - family with sequence similarity 133 member B
38. TIMMDC1 ENSGALG00000024480 9337 1.489 - - - 0.716 - - - 0.773 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
39. DYNC1I2 ENSGALG00000009551 5420 1.486 - - 0.740 - - - - 0.746 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
40. DLG3 ENSGALG00000041900 3016 1.484 - - 0.734 - - - - 0.750 - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
41. MSH6 ENSGALG00000008957 6396 1.479 - - - 0.750 - - - 0.729 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
42. NUP93 ENSGALG00000003010 16504 1.475 - - 0.761 - - - - 0.714 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
43. GBE1 ENSGALG00000042771 2323 1.472 - - 0.769 - - - - 0.703 - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
44. HEATR3 ENSGALG00000041613 2704 1.465 - - - 0.756 - - - 0.709 - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
45. CCDC132 CCDC132 2632 1.441 - - - 0.702 - - - 0.739 - -
46. NIPA2 ENSGALG00000016737 3792 1.42 - - - 0.713 - - - 0.707 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
47. CLK1 ENSGALG00000028438 3550 1.409 - - - 0.701 - - - 0.708 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
48. NSF ENSGALG00000001055 7399 0.982 - - - - - - 0.982 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
49. FKBP9 ENSGALG00000037669 12079 0.982 - - - - - - 0.982 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
50. STT3B ENSGALG00000011465 11939 0.982 - - - - - - 0.982 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
51. TMEM9B ENSGALG00000005908 14074 0.98 - - - - - - 0.980 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
52. BTG1 ENSGALG00000011276 17496 0.979 - - - - - - 0.979 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
53. FAM206A ENSGALG00000019524 7170 0.979 - - - - - - 0.979 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
54. SAMM50 ENSGALG00000014194 20437 0.979 - - - - - - 0.979 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
55. NAA15 ENSGALG00000009782 18563 0.979 - - - - - - 0.979 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
56. SF3A1 ENSGALG00000007937 11716 0.979 - - - - - - 0.979 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
57. WDR33 ENSGALG00000002043 6340 0.978 - - - - - - 0.978 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
58. GAS41 GAS41 9941 0.978 - - - - - - 0.978 - - -
59. CASC4 ENSGALG00000008208 8338 0.978 - - - - - - 0.978 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
60. TLE4 TLE4 7278 0.978 - - - - - - 0.978 - - -
61. SLC9A3R2 ENSGALG00000005608 4220 0.977 - - - - - - 0.977 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
62. GTF2I ENSGALG00000021665 6812 0.977 - - - - - - 0.977 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
63. BID ENSGALG00000013039 12427 0.976 - - - - - - 0.976 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
64. HOXB3 ENSGALG00000043219 5198 0.976 - - - - - - 0.976 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
65. ZCCHC17 ENSGALG00000000618 5163 0.976 - - - - - - 0.976 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
66. VPS41 ENSGALG00000031635 4391 0.976 - - - - - - 0.976 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
67. RARRES2 ENSGALG00000042642 3043 0.976 - - - - - - 0.976 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
68. FAAH ENSGALG00000010433 3309 0.975 - - - - - - 0.975 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
69. MTF2 ENSGALG00000043087 15225 0.975 - - - - - - 0.975 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
70. LPHN2 LPHN2 16507 0.971 - - - - - - 0.971 - - -
71. OLFML3 ENSGALG00000001956 28633 0.971 - - - - - - 0.971 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
72. NOL9 ENSGALG00000028958 23978 0.966 - - - - - - 0.966 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
73. FANCC ENSGALG00000012618 7002 0.966 - - - - - - 0.966 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
74. SRSF7 ENSGALG00000033120 43444 0.959 - - - - - - 0.959 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
75. PKM ENSGALG00000001992 93960 0.945 - - - - - - 0.945 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
76. GNB2L1 ENSGALG00000000122 194871 0.933 - - - - - - 0.933 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
77. ACTG1 ENSGALG00000001381 63905 0.929 - - - - - - 0.929 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
78. RAB34 ENSGALG00000026315 1193 0.894 - - 0.894 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
79. NCOA3 ENSGALG00000004570 243 0.892 - - - 0.892 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
80. PANK1 ENSGALG00000006431 2910 0.887 - - - 0.887 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
81. TMEM41B ENSGALG00000005815 2049 0.886 - - 0.886 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
82. KIAA1432 KIAA1432 1792 0.886 - - - 0.886 - - - - - -
83. PARN ENSGALG00000003091 6363 0.882 - - - - - - - 0.882 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
84. ITPKB ENSGALG00000009068 324 0.88 - - - 0.880 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
85. VPS13B 2293 0.88 - - - 0.880 - - - - - - vacuolar protein sorting 13 homolog B
86. DBN1 ENSGALG00000033405 216 0.88 - - - 0.880 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
87. SENP6 ENSGALG00000015901 8013 0.879 - - - - - - - 0.879 - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
88. NUDT4 ENSGALG00000011285 2998 0.878 - - - 0.878 - - - - - - nudix hydrolase 4, transcript variant X5
89. ENSGALG00000004032 ENSGALG00000004032 2010 0.877 - - 0.877 - - - - - - -
90. VWDE ENSGALG00000042443 160 0.876 - - - 0.876 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
91. HMHA1 HMHA1 929 0.875 - - - 0.875 - - - - - -
92. GFPT2 ENSGALG00000039705 562 0.873 - - - 0.873 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
93. CKB ENSGALG00000011511 2100 0.873 - - 0.873 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
94. RBFOX1 ENSGALG00000034325 2133 0.872 - - - 0.872 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
95. RNPC3 ENSGALG00000005162 269 0.872 - - - 0.872 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
96. TGS1 ENSGALG00000015340 5897 0.872 - - - 0.872 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
97. ENSGALG00000027412 ENSGALG00000027412 202 0.87 - - - 0.870 - - - - - -
98. MCCC2L ENSGALG00000011255 889 0.87 - - - 0.870 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
99. ZBTB17 ENSGALG00000035352 280 0.87 - - - 0.870 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
100. MLH3 ENSGALG00000010304 231 0.87 - - - 0.870 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]

There are 688 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA