Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for L3hypdh

Gene Name Gene ID Reads Annotation
L3hypdh ENSMUSG00000019718 234 L-3-hydroxyproline dehydratase (trans-) [Source:MGI Symbol;Acc:MGI:1914467]







Genes with expression patterns similar to L3hypdh

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. L3hypdh ENSMUSG00000019718 234 6 1.000 1.000 1.000 1.000 1.000 1.000 L-3-hydroxyproline dehydratase (trans-) [Source:MGI Symbol;Acc:MGI:1914467]
2. Tmem91 ENSMUSG00000061702 36 0.87 - - - 0.870 - - transmembrane protein 91 [Source:MGI Symbol;Acc:MGI:2443589]
3. Larp6 ENSMUSG00000034839 76 0.867 - - 0.867 - - - La ribonucleoprotein domain family, member 6 [Source:MGI Symbol;Acc:MGI:1914807]
4. Gm12909 ENSMUSG00000085404 14 0.864 - - - 0.864 - - predicted gene 12909 [Source:MGI Symbol;Acc:MGI:3651135]
5. Fv1 ENSMUSG00000070583 24 0.864 - - - 0.864 - - Friend virus susceptibility 1 [Source:MGI Symbol;Acc:MGI:95595]
6. Spata1 ENSMUSG00000028188 361 0.861 - - 0.861 - - - spermatogenesis associated 1 [Source:MGI Symbol;Acc:MGI:1918201]
7. Popdc3 ENSMUSG00000019848 48 0.861 - - - 0.861 - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
8. Gm13477 ENSMUSG00000083849 19 0.86 - - - 0.860 - - predicted gene 13477 [Source:MGI Symbol;Acc:MGI:3652109]
9. Fgl1 ENSMUSG00000031594 32 0.86 - - - 0.860 - - fibrinogen-like protein 1 [Source:MGI Symbol;Acc:MGI:102795]
10. Slc26a8 ENSMUSG00000036196 29 0.858 - - - 0.858 - - solute carrier family 26, member 8 [Source:MGI Symbol;Acc:MGI:2385046]
11. 1700034H15Rik ENSMUSG00000055833, ENSMUSG00000111237 36 0.858 - - - 0.858 - - RIKEN cDNA 1700034H15 gene [Source:MGI Symbol;Acc:MGI:1921515]
12. Dennd4c ENSMUSG00000038024 349 0.853 - - 0.853 - - - DENN/MADD domain containing 4C [Source:MGI Symbol;Acc:MGI:1914769]
13. Gcom1 Gcom1 45 0.853 - - - 0.853 - -
14. Ust ENSMUSG00000047712 319 0.852 - - - 0.852 - - uronyl-2-sulfotransferase [Source:MGI Symbol;Acc:MGI:2442406]
15. Abcg4 ENSMUSG00000032131 186 0.85 - - - 0.850 - - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
16. Igsf6 ENSMUSG00000035004 28 0.849 - - - 0.849 - - immunoglobulin superfamily, member 6 [Source:MGI Symbol;Acc:MGI:1891393]
17. Abcc3 ENSMUSG00000020865 75 0.848 - - - 0.848 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:MGI Symbol;Acc:MGI:1923658]
18. Inpp1 ENSMUSG00000026102 176 0.847 - - - 0.847 - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
19. Ppp1r3b ENSMUSG00000046794 68 0.845 - - - 0.845 - - protein phosphatase 1, regulatory subunit 3B [Source:MGI Symbol;Acc:MGI:2177268]
20. Gm1840 ENSMUSG00000043192 62 0.841 - - - 0.841 - - predicted gene 1840 [Source:MGI Symbol;Acc:MGI:3037698]
21. Rnasel ENSMUSG00000066800 396 0.839 - - 0.839 - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
22. Fam222a ENSMUSG00000041930 164 0.833 - - - 0.833 - - family with sequence similarity 222, member A [Source:MGI Symbol;Acc:MGI:3605543]
23. Gm15396 ENSMUSG00000109491 112 0.831 - - - 0.831 - - predicted gene 15396 [Source:MGI Symbol;Acc:MGI:3705202]
24. Syt6 ENSMUSG00000027849 95 0.831 - - - 0.831 - - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
25. Pigv ENSMUSG00000043257 209 0.831 - - - 0.831 - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:MGI Symbol;Acc:MGI:2442480]
26. Wnk4 ENSMUSG00000035112 162 0.83 - - - 0.830 - - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
27. Hacl1 ENSMUSG00000021884 169 0.828 - - - 0.828 - - 2-hydroxyacyl-CoA lyase 1 [Source:MGI Symbol;Acc:MGI:1929657]
28. Jsrp1 ENSMUSG00000020216 69 0.827 - - - 0.827 - - junctional sarcoplasmic reticulum protein 1 [Source:MGI Symbol;Acc:MGI:1916700]
29. Entpd1 ENSMUSG00000048120 159 0.827 - - - 0.827 - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:MGI Symbol;Acc:MGI:102805]
30. Vasn ENSMUSG00000039646 1210 0.824 - - - 0.824 - - vasorin [Source:MGI Symbol;Acc:MGI:2177651]
31. 9930012K11Rik ENSMUSG00000044551 128 0.819 - - - 0.819 - - RIKEN cDNA 9930012K11 gene [Source:MGI Symbol;Acc:MGI:2145726]
32. Gm527 ENSMUSG00000047227 185 0.819 - - - 0.819 - - predicted gene 527 [Source:MGI Symbol;Acc:MGI:2685373]
33. Mst1r ENSMUSG00000032584 117 0.816 - - - 0.816 - - macrophage stimulating 1 receptor (c-met-related tyrosine kinase) [Source:MGI Symbol;Acc:MGI:99614]
34. Idua ENSMUSG00000033540 225 0.815 - - - 0.815 - - iduronidase, alpha-L [Source:MGI Symbol;Acc:MGI:96418]
35. Ndrg1 ENSMUSG00000005125 165 0.815 - - 0.815 - - - N-myc downstream regulated gene 1 [Source:MGI Symbol;Acc:MGI:1341799]
36. Crip1 ENSMUSG00000006360 447 0.814 - - - 0.814 - - cysteine-rich protein 1 (intestinal) [Source:MGI Symbol;Acc:MGI:88501]
37. Lefty2 ENSMUSG00000066652 109 0.814 - - - 0.814 - - left-right determination factor 2 [Source:MGI Symbol;Acc:MGI:2443573]
38. Mlf1 ENSMUSG00000048416 428 0.81 - - - 0.810 - - myeloid leukemia factor 1 [Source:MGI Symbol;Acc:MGI:1341819]
39. Tm6sf1 ENSMUSG00000038623 133 0.81 - - - 0.810 - - transmembrane 6 superfamily member 1 [Source:MGI Symbol;Acc:MGI:1933209]
40. Aqp1 ENSMUSG00000004655 53 0.806 - - - 0.806 - - aquaporin 1 [Source:MGI Symbol;Acc:MGI:103201]
41. Kcnk2 ENSMUSG00000037624 670 0.805 - - - 0.805 - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
42. Ptgr2 ENSMUSG00000072946 410 0.805 - - - 0.805 - - prostaglandin reductase 2 [Source:MGI Symbol;Acc:MGI:1916372]
43. Synpo2 ENSMUSG00000050315 250 0.803 - - - 0.803 - - synaptopodin 2 [Source:MGI Symbol;Acc:MGI:2153070]
44. Gm13507 Gm13507 95 0.803 - - - 0.803 - -
45. Prss8 ENSMUSG00000030800 121 0.8 - - 0.800 - - - protease, serine 8 (prostasin) [Source:MGI Symbol;Acc:MGI:1923810]
46. Gm10243 ENSMUSG00000095526 501 0.798 - - - 0.798 - - predicted gene 10243 [Source:MGI Symbol;Acc:MGI:3704266]
47. 4930522L14Rik ENSMUSG00000072762 481 0.794 - - 0.794 - - - RIKEN cDNA 4930522L14 gene [Source:MGI Symbol;Acc:MGI:1925270]
48. Itga11 ENSMUSG00000032243 63 0.794 - - - 0.794 - - integrin alpha 11 [Source:MGI Symbol;Acc:MGI:2442114]
49. mt-Nd6 ENSMUSG00000064368 301 0.793 - - - 0.793 - - mitochondrially encoded NADH dehydrogenase 6 [Source:MGI Symbol;Acc:MGI:102495]
50. Irak2 ENSMUSG00000060477 270 0.792 - - 0.792 - - - interleukin-1 receptor-associated kinase 2 [Source:MGI Symbol;Acc:MGI:2429603]
51. Gulo ENSMUSG00000034450 92 0.791 - - - 0.791 - - gulonolactone (L-) oxidase [Source:MGI Symbol;Acc:MGI:1353434]
52. Clec2l ENSMUSG00000079598 84 0.789 - - 0.789 - - - C-type lectin domain family 2, member L [Source:MGI Symbol;Acc:MGI:2141402]
53. Tm7sf2 ENSMUSG00000024799 960 0.789 - - - 0.789 - - transmembrane 7 superfamily member 2 [Source:MGI Symbol;Acc:MGI:1920416]
54. Mtcp1 ENSMUSG00000031200 338 0.788 - - - 0.788 - - mature T cell proliferation 1 [Source:MGI Symbol;Acc:MGI:102699]
55. Zfp454 ENSMUSG00000048728 541 0.787 - - - 0.787 - - zinc finger protein 454 [Source:MGI Symbol;Acc:MGI:2679253]
56. Gm10722 ENSMUSG00000091028 539 0.786 - - - 0.786 - - predicted gene 10722 [Source:MGI Symbol;Acc:MGI:3642024]
57. Cisd3 ENSMUSG00000078695 472 0.786 - - - 0.786 - - CDGSH iron sulfur domain 3 [Source:MGI Symbol;Acc:MGI:101788]
58. Fam72a ENSMUSG00000055184 170 0.786 - - - 0.786 - - family with sequence similarity 72, member A [Source:MGI Symbol;Acc:MGI:1919669]
59. Lyrm9 ENSMUSG00000072640 288 0.784 - - - 0.784 - - LYR motif containing 9 [Source:MGI Symbol;Acc:MGI:1913524]
60. Tmem104 ENSMUSG00000045980 190 0.783 - - - 0.783 - - transmembrane protein 104 [Source:MGI Symbol;Acc:MGI:2444222]
61. Wars2 ENSMUSG00000004233 436 0.783 - - - 0.783 - - tryptophanyl tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1917810]
62. Ube4a ENSMUSG00000059890 1421 0.783 - - 0.783 - - - ubiquitination factor E4A [Source:MGI Symbol;Acc:MGI:2154580]
63. Sclt1 ENSMUSG00000059834 767 0.783 - - - 0.783 - - sodium channel and clathrin linker 1 [Source:MGI Symbol;Acc:MGI:1914411]
64. Ebf4 ENSMUSG00000053552 463 0.782 - - - 0.782 - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
65. Eps8 ENSMUSG00000015766 242 0.781 - - 0.781 - - - epidermal growth factor receptor pathway substrate 8 [Source:MGI Symbol;Acc:MGI:104684]
66. Nudt22 ENSMUSG00000037349 246 0.78 - - - 0.780 - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:MGI Symbol;Acc:MGI:1915573]
67. Miip ENSMUSG00000029022 225 0.778 - - - 0.778 - - migration and invasion inhibitory protein [Source:MGI Symbol;Acc:MGI:106506]
68. Negr1 ENSMUSG00000040037 312 0.777 - - 0.777 - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
69. Fam173b ENSMUSG00000039065 421 0.777 - - - 0.777 - - family with sequence similarity 173, member B [Source:MGI Symbol;Acc:MGI:1915323]
70. Acvr2a ENSMUSG00000052155 394 0.775 - - - 0.775 - - activin receptor IIA [Source:MGI Symbol;Acc:MGI:102806]
71. Efcab11 ENSMUSG00000021176 347 0.771 - - - 0.771 - - EF-hand calcium binding domain 11 [Source:MGI Symbol;Acc:MGI:1926017]
72. Ilvbl ENSMUSG00000032763 400 0.769 - - - 0.769 - - ilvB (bacterial acetolactate synthase)-like [Source:MGI Symbol;Acc:MGI:1351911]
73. Trmu ENSMUSG00000022386 468 0.769 - - - 0.769 - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:MGI Symbol;Acc:MGI:1919276]
74. Rtca ENSMUSG00000000339 481 0.768 - - 0.768 - - - RNA 3'-terminal phosphate cyclase [Source:MGI Symbol;Acc:MGI:1913618]
75. B830012L14Rik ENSMUSG00000098202 2865 0.768 - - 0.768 - - - RIKEN cDNA B830012L14 gene [Source:MGI Symbol;Acc:MGI:2443332]
76. Zxdc ENSMUSG00000034430 639 0.766 - - - 0.766 - - ZXD family zinc finger C [Source:MGI Symbol;Acc:MGI:1933108]
77. Unk ENSMUSG00000020770 1364 0.765 - - 0.765 - - - unkempt family zinc finger [Source:MGI Symbol;Acc:MGI:2442456]
78. Gm13181 ENSMUSG00000081070 380 0.765 - - - 0.765 - - predicted gene 13181 [Source:MGI Symbol;Acc:MGI:3650464]
79. Tgds ENSMUSG00000022130 430 0.764 - - - 0.764 - - TDP-glucose 4,6-dehydratase [Source:MGI Symbol;Acc:MGI:1923605]
80. Mknk2 ENSMUSG00000020190 1666 0.764 - - - 0.764 - - MAP kinase-interacting serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:894279]
81. Gm20699 Gm20699 138 0.763 - - 0.763 - - -
82. Spats2l ENSMUSG00000038305 220 0.761 - - - 0.761 - - spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
83. R74862 ENSMUSG00000059277 301 0.758 - - - 0.758 - - expressed sequence R74862 [Source:MGI Symbol;Acc:MGI:2142382]
84. Lrch2 ENSMUSG00000031290 949 0.756 - - - 0.756 - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:MGI Symbol;Acc:MGI:2147870]
85. Gm11826 ENSMUSG00000083328 131 0.755 - - - 0.755 - - predicted gene 11826 [Source:MGI Symbol;Acc:MGI:3651142]
86. Grk5 ENSMUSG00000003228 166 0.755 - - - 0.755 - - G protein-coupled receptor kinase 5 [Source:MGI Symbol;Acc:MGI:109161]
87. Zcchc10 ENSMUSG00000018239 1396 0.754 - - - 0.754 - - zinc finger, CCHC domain containing 10 [Source:MGI Symbol;Acc:MGI:1196228]
88. Gm16580 ENSMUSG00000089764 563 0.753 - - - 0.753 - - predicted gene 16580 [Source:MGI Symbol;Acc:MGI:4415000]
89. Psmg4 ENSMUSG00000071451 1842 0.752 - - - 0.752 - - proteasome (prosome, macropain) assembly chaperone 4 [Source:MGI Symbol;Acc:MGI:1916916]
90. Plekhm1 ENSMUSG00000034247 251 0.749 - - - 0.749 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
91. Rhbdf2 ENSMUSG00000020806 202 0.748 - - - 0.748 - - rhomboid 5 homolog 2 [Source:MGI Symbol;Acc:MGI:2442473]
92. Atf7ip2 ENSMUSG00000039200 110 0.747 - - - 0.747 - - activating transcription factor 7 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1922579]
93. Cc2d1a ENSMUSG00000036686 258 0.747 - - - 0.747 - - coiled-coil and C2 domain containing 1A [Source:MGI Symbol;Acc:MGI:2384831]
94. Snx32 ENSMUSG00000056185 122 0.746 - - - 0.746 - - sorting nexin 32 [Source:MGI Symbol;Acc:MGI:2444704]
95. Pkn3 ENSMUSG00000026785 211 0.745 - - - 0.745 - - protein kinase N3 [Source:MGI Symbol;Acc:MGI:2388285]
96. Vmn2r18 ENSMUSG00000091794 10 0.745 - - 0.745 - - - vomeronasal 2, receptor 18 [Source:MGI Symbol;Acc:MGI:3645314]
97. Apln ENSMUSG00000037010 271 0.744 - - - 0.744 - - apelin [Source:MGI Symbol;Acc:MGI:1353624]
98. Gm11675 ENSMUSG00000082272 10 0.744 - - 0.744 - - - predicted gene 11675 [Source:MGI Symbol;Acc:MGI:3650970]
99. Fam126b ENSMUSG00000038174 1511 0.743 - - - 0.743 - - family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
100. Tysnd1 ENSMUSG00000020087 398 0.743 - - - 0.743 - - trypsin domain containing 1 [Source:MGI Symbol;Acc:MGI:1919017]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA