Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for L3HYPDH

Gene Name Gene ID Reads Annotation
L3HYPDH ENSGALG00000012011 2212 trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]











Genes with expression patterns similar to L3HYPDH

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. L3HYPDH ENSGALG00000012011 2212 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
2. POLR3H ENSGALG00000011947 2899 1.862 - - - - - - - 0.990 0.872 - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
3. FAM122A ENSGALG00000006127 9630 1.752 - - - - - - - 0.934 0.818 - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
4. PM20D1 ENSGALG00000000724 2108 1.751 - - - - - - - 0.989 0.762 - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
5. CAT ENSGALG00000030187 7534 1.69 - - - - - - - 0.961 0.729 - catalase [Source:NCBI gene;Acc:423600]
6. CEP250 ENSGALG00000026151 163 1.639 - - - - - - - - 0.892 0.747 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
7. TRIM9 ENSGALG00000012367 1267 0.999 - - - - - - - 0.999 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
8. SERPINH1 ENSGALG00000011214 15311 0.998 - - - - - - - 0.998 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
9. ARFGAP3 ENSGALG00000014140 4612 0.995 - - - - - - - 0.995 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
10. SLC25A14 ENSGALG00000004063 5574 0.995 - - - - - - - 0.995 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
11. PDIA5 ENSGALG00000011689 6913 0.993 - - - - - - - 0.993 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
12. EEFSEC ENSGALG00000038684 298 0.991 - - - - - - - 0.991 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
13. B9D1 ENSGALG00000005096 760 0.991 - - - - - - - 0.991 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
14. COL14A1 ENSGALG00000037675 2652 0.991 - - - - - - - 0.991 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
15. TNPO3 ENSGALG00000039420 5178 0.991 - - - - - - - 0.991 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
16. C26H6ORF106 C26H6ORF106 2168 0.991 - - - - - - - 0.991 - -
17. CLIP1 ENSGALG00000004467 1058 0.99 - - - - - - - 0.990 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
18. GOT2 ENSGALG00000002321 4961 0.99 - - - - - - - 0.990 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
19. EPM2A ENSGALG00000012275 872 0.99 - - - - - - - 0.990 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
20. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.99 - - - - - - - 0.990 - -
21. TCTEX1D2 ENSGALG00000027722 2201 0.99 - - - - - - - 0.990 - - Tctex1 domain containing 2
22. TNFRSF11B ENSGALG00000043167 911 0.99 - - - - - - - 0.990 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
23. PRKAR2A ENSGALG00000007023 909 0.99 - - - - - - - 0.990 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
24. TLE3 ENSGALG00000008120 2655 0.989 - - - - - - - 0.989 - - transducin like enhancer of split 3, transcript variant X10
25. ELMO2 ENSGALG00000007246 4569 0.989 - - - - - - - 0.989 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
26. MRPS31 ENSGALG00000017033 9287 0.989 - - - - - - - 0.989 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
27. CCDC167 ENSGALG00000010151 3567 0.989 - - - - - - - 0.989 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
28. WDR91 ENSGALG00000011724 5787 0.989 - - - - - - - 0.989 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
29. KCNK5 ENSGALG00000034077 3233 0.988 - - - - - - - 0.988 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
30. LYRM4 ENSGALG00000027339 2917 0.987 - - - - - - - 0.987 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
31. KPNA1 ENSGALG00000014426 2724 0.987 - - - - - - - 0.987 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
32. BRMS1L ENSGALG00000010093 4964 0.987 - - - - - - - 0.987 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
33. GNG10 ENSGALG00000015683 6905 0.986 - - - - - - - 0.986 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
34. MRPS7 ENSGALG00000007999 5445 0.986 - - - - - - - 0.986 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
35. CEP192 ENSGALG00000035625 2270 0.985 - - - - - - - 0.985 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
36. NOVA1 ENSGALG00000009850 7584 0.984 - - - - - - - 0.984 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
37. CAPZA1 ENSGALG00000001547 24242 0.983 - - - - - - - 0.983 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
38. OTUD4 ENSGALG00000009968 3919 0.983 - - - - - - - 0.983 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
39. CYB5B ENSGALG00000000660 9733 0.982 - - - - - - - 0.982 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
40. RAB24 ENSGALG00000002984 6264 0.982 - - - - - - - 0.982 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
41. ENSGALG00000002595 ENSGALG00000002595 32163 0.982 - - - - - - - 0.982 - -
42. BMP5 ENSGALG00000016293 2119 0.982 - - - - - - - 0.982 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
43. ARID4A ENSGALG00000012037 8554 0.98 - - - - - - - 0.980 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
44. MFF ENSGALG00000003079 5289 0.979 - - - - - - - 0.979 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
45. SGCE ENSGALG00000009670 3070 0.978 - - - - - - - 0.978 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
46. TRMT10A ENSGALG00000012264 2467 0.978 - - - - - - - 0.978 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
47. HHIP ENSGALG00000009948 1536 0.978 - - - - - - - 0.978 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
48. LGMN ENSGALG00000010811 7401 0.977 - - - - - - - 0.977 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
49. ATPAF1 ENSGALG00000010444 3677 0.977 - - - - - - - 0.977 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
50. FAM136A ENSGALG00000042163 39487 0.975 - - - - - - - 0.975 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
51. SHROOM2 ENSGALG00000030802 4517 0.975 - - - - - - - 0.975 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
52. UPF3B ENSGALG00000008618 12350 0.973 - - - - - - - 0.973 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
53. PTP4A1 ENSGALG00000016271 23953 0.971 - - - - - - - 0.971 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
54. ISCA1 ENSGALG00000012606 10342 0.965 - - - - - - - 0.965 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
55. NMD3 ENSGALG00000009533 8726 0.957 - - - - - - - 0.957 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
56. RPB6 RPB6 9517 0.956 - - - - - - - 0.956 - -
57. NAT10 ENSGALG00000014573 12754 0.948 - - - - - - - 0.948 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
58. COPS3 ENSGALG00000004834 16012 0.948 - - - - - - - 0.948 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
59. GSTO1 ENSGALG00000008409 7561 0.944 - - - - - - - 0.944 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
60. RFC4 ENSGALG00000008703 5842 0.943 - - - - - - - 0.943 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
61. MAP2 ENSGALG00000002789 6597 0.942 - - - - - - - 0.942 - - microtubule associated protein 2, transcript variant X33
62. C7 ENSGALG00000014835 322 0.94 - - - - - - - - 0.940 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
63. DGKZ ENSGALG00000008380 5389 0.939 - - - - - - - 0.939 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
64. IDI1 ENSGALG00000006723 7761 0.938 - - - - - - - 0.938 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
65. CNOT6 ENSGALG00000034316 10496 0.934 - - - - - - - 0.934 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
66. UBE2F ENSGALG00000003812 13874 0.931 - - - - - - - 0.931 - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
67. CNDP2 ENSGALG00000019514 19531 0.929 - - - - - - - 0.929 - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
68. ATG12 ENSGALG00000002345 3607 0.928 - - - - - - - 0.928 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
69. MIB1 ENSGALG00000014974 3583 0.926 - - - - - - - - 0.926 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
70. BDH1_1 ENSGALG00000023601 6109 0.926 - - - - - - - 0.926 - - 3-hydroxybutyrate dehydrogenase, type 1
71. PAX1 ENSGALG00000039040 3339 0.925 - - - - - - - 0.925 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
72. FAM120B ENSGALG00000011180 101 0.925 - - - - - - - - 0.925 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
73. MRPL38 ENSGALG00000002194 6648 0.925 - - - - - - - 0.925 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
74. PHLDA2 ENSGALG00000032687 7733 0.923 - - - - - - - 0.923 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
75. N6AMT2 N6AMT2 4703 0.922 - - - - - - - 0.922 - -
76. FDFT1 ENSGALG00000016665 3053 0.917 - - - - - - - - 0.917 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
77. OGFOD3 ENSGALG00000001618 2438 0.914 - - - - - - - - 0.914 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
78. PRDM15 ENSGALG00000019178 2729 0.912 - - - - - - - - 0.912 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
79. CEP112 ENSGALG00000034989 123 0.912 - - - - - - - - 0.912 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
80. ALMS1 ENSGALG00000044620 570 0.912 - - - - - - - - 0.912 - ALMS1, centrosome and basal body associated protein, transcript variant X1
81. PLCXD3 ENSGALG00000014845 247 0.91 - - - - - - - - 0.910 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
82. PPP1CC ENSGALG00000004571 14748 0.908 - - - - - - - 0.908 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
83. NTL ENSGALG00000005156 278 0.907 - - - - - - - - 0.907 - neurotrypsin-like, transcript variant X7
84. PCLO 249 0.907 - - - - - - - - 0.907 - piccolo presynaptic cytomatrix protein
85. CARS2 ENSGALG00000016847 3814 0.906 - - - - - - - - 0.906 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
86. TOM1L2 ENSGALG00000004902 89 0.905 - - - - - - - - 0.905 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
87. RAD17 ENSGALG00000015571 1374 0.904 - - - - - - - - 0.904 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
88. CAMKK1 ENSGALG00000001617 64 0.903 - - - - - - - - 0.903 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
89. LHCGR ENSGALG00000009095 174 0.903 - - - - - - - - 0.903 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
90. ACO2 ENSGALG00000011950 30387 0.902 - - - - - - - 0.902 - - aconitase 2 [Source:NCBI gene;Acc:374009]
91. ENSGALG00000026919 ENSGALG00000026919 301 0.901 - - - - - - - - 0.901 -
92. ECM2 ENSGALG00000004695 375 0.9 - - - - - - - - 0.900 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
93. ABCC8 ENSGALG00000006172 41 0.9 - - - - - - - - 0.900 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
94. KIF2C ENSGALG00000010120 8999 0.899 - - - - - - - 0.899 - - kinesin family member 2C, transcript variant X1
95. KIAA1217 ENSGALG00000007766 144 0.899 - - - - - - - - 0.899 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
96. CUX2 ENSGALG00000004598 231 0.899 - - - - - - - - 0.899 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
97. KLHL15 ENSGALG00000016345 1638 0.898 - - - - - - - - 0.898 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
98. PRCC ENSGALG00000040696 9346 0.897 - - - - - - - 0.897 - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
99. IQCA1 ENSGALG00000003980 87 0.897 - - - - - - - - 0.897 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
100. AES ENSGALG00000029503 17676 0.896 - - - - - - - 0.896 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA