Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Khdrbs3

Gene Name Gene ID Reads Annotation
Khdrbs3 ENSMUSG00000022332 2266 KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312]







Genes with expression patterns similar to Khdrbs3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Khdrbs3 ENSMUSG00000022332 2266 6 1.000 1.000 1.000 1.000 1.000 1.000 KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312]
2. Zfp319 ENSMUSG00000046556 583 0.854 - - - - 0.854 - zinc finger protein 319 [Source:MGI Symbol;Acc:MGI:1890618]
3. 1110008P14Rik ENSMUSG00000039195 3077 0.815 - 0.815 - - - - RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
4. Cpne3 ENSMUSG00000028228 2016 0.814 - - - - 0.814 - copine III [Source:MGI Symbol;Acc:MGI:1917818]
5. Myo9a ENSMUSG00000039585 1582 0.805 - 0.805 - - - - myosin IXa [Source:MGI Symbol;Acc:MGI:107735]
6. Wdr35 ENSMUSG00000066643 640 0.804 - 0.804 - - - - WD repeat domain 35 [Source:MGI Symbol;Acc:MGI:1921932]
7. Zbtb5 ENSMUSG00000049657 1113 0.801 - 0.801 - - - - zinc finger and BTB domain containing 5 [Source:MGI Symbol;Acc:MGI:1924601]
8. Emc3 ENSMUSG00000030286 997 0.8 - 0.800 - - - - ER membrane protein complex subunit 3 [Source:MGI Symbol;Acc:MGI:1913337]
9. Wwox ENSMUSG00000004637 564 0.798 - 0.798 - - - - WW domain-containing oxidoreductase [Source:MGI Symbol;Acc:MGI:1931237]
10. Oaf ENSMUSG00000032014 1301 0.788 - 0.788 - - - - out at first homolog [Source:MGI Symbol;Acc:MGI:94852]
11. Nckap1 ENSMUSG00000027002 5497 0.788 - 0.788 - - - - NCK-associated protein 1 [Source:MGI Symbol;Acc:MGI:1355333]
12. Trub1 ENSMUSG00000025086 1396 0.785 - 0.785 - - - - TruB pseudouridine (psi) synthase family member 1 [Source:MGI Symbol;Acc:MGI:1919383]
13. Spice1 ENSMUSG00000043065 1394 0.785 - - - - 0.785 - spindle and centriole associated protein 1 [Source:MGI Symbol;Acc:MGI:1196252]
14. Rap2c ENSMUSG00000050029 1942 0.785 - 0.785 - - - - RAP2C, member of RAS oncogene family [Source:MGI Symbol;Acc:MGI:1919315]
15. Tmem66 Tmem66 3059 0.784 - 0.784 - - - -
16. Prdm15 ENSMUSG00000014039 801 0.779 - 0.779 - - - - PR domain containing 15 [Source:MGI Symbol;Acc:MGI:1930121]
17. Nt5c2 ENSMUSG00000025041 773 0.778 - - - - 0.778 - 5'-nucleotidase, cytosolic II [Source:MGI Symbol;Acc:MGI:2178563]
18. Cyth2 ENSMUSG00000003269 2474 0.778 - - - - 0.778 - cytohesin 2 [Source:MGI Symbol;Acc:MGI:1334255]
19. Armc8 ENSMUSG00000032468 1199 0.776 - - - - 0.776 - armadillo repeat containing 8 [Source:MGI Symbol;Acc:MGI:1921375]
20. Pds5a ENSMUSG00000029202 2139 0.776 - - - - 0.776 - PDS5 cohesin associated factor A [Source:MGI Symbol;Acc:MGI:1918771]
21. Sec23ip ENSMUSG00000055319 1565 0.776 - 0.776 - - - - Sec23 interacting protein [Source:MGI Symbol;Acc:MGI:2450915]
22. Tada3 ENSMUSG00000048930 1021 0.775 - - - - 0.775 - transcriptional adaptor 3 [Source:MGI Symbol;Acc:MGI:1915724]
23. Aldh9a1 ENSMUSG00000026687 2500 0.773 - 0.773 - - - - aldehyde dehydrogenase 9, subfamily A1 [Source:MGI Symbol;Acc:MGI:1861622]
24. Hoxc9 ENSMUSG00000036139 4145 0.771 0.771 - - - - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
25. Mettl1 ENSMUSG00000006732 1290 0.769 - 0.769 - - - - methyltransferase like 1 [Source:MGI Symbol;Acc:MGI:1339986]
26. Dach1 ENSMUSG00000055639 1422 0.768 0.768 - - - - - dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
27. Cox5a ENSMUSG00000000088 5772 0.765 - 0.765 - - - - cytochrome c oxidase subunit 5A [Source:MGI Symbol;Acc:MGI:88474]
28. Nup43 ENSMUSG00000040034, ENSMUSG00000116037 1278 0.762 - - - - 0.762 - nucleoporin 43 [Source:MGI Symbol;Acc:MGI:1917162]
29. Tab3 ENSMUSG00000035476 753 0.761 - 0.761 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 3 [Source:MGI Symbol;Acc:MGI:1913974]
30. Sema5b ENSMUSG00000052133 891 0.76 0.760 - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
31. Hap1 ENSMUSG00000006930 613 0.757 0.757 - - - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
32. C130071C03Rik ENSMUSG00000050334 1582 0.754 0.754 - - - - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
33. Gm14284 Gm14284 6370 0.751 - 0.751 - - - -
34. Enc1 ENSMUSG00000041773 2185 0.75 0.750 - - - - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
35. Arhgap42 ENSMUSG00000050730 1665 0.748 - 0.748 - - - - Rho GTPase activating protein 42 [Source:MGI Symbol;Acc:MGI:1918794]
36. Lsm10 ENSMUSG00000050188 1456 0.746 - 0.746 - - - - U7 snRNP-specific Sm-like protein LSM10 [Source:MGI Symbol;Acc:MGI:2151045]
37. Ptcd3 ENSMUSG00000063884 4633 0.745 - 0.745 - - - - pentatricopeptide repeat domain 3 [Source:MGI Symbol;Acc:MGI:1917206]
38. Nbr1 ENSMUSG00000017119 4419 0.74 - - - - 0.740 - NBR1, autophagy cargo receptor [Source:MGI Symbol;Acc:MGI:108498]
39. Zfp346 ENSMUSG00000021481 1512 0.74 - - - - 0.740 - zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]
40. Wscd1 ENSMUSG00000020811 318 0.739 0.739 - - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
41. Slc4a7 ENSMUSG00000021733 3154 0.739 - 0.739 - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:MGI Symbol;Acc:MGI:2443878]
42. Mpnd ENSMUSG00000003199 2108 0.736 - 0.736 - - - - MPN domain containing [Source:MGI Symbol;Acc:MGI:1915297]
43. Vopp1 ENSMUSG00000037788 2348 0.736 - 0.736 - - - - vesicular, overexpressed in cancer, prosurvival protein 1 [Source:MGI Symbol;Acc:MGI:2141658]
44. Nedd9 ENSMUSG00000021365 1501 0.735 0.735 - - - - - neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]
45. Ube2c ENSMUSG00000001403 11085 0.732 - - - - 0.732 - ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
46. Psat1 ENSMUSG00000024640 15774 0.73 0.730 - - - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
47. Preb ENSMUSG00000045302 2019 0.73 - - - - 0.730 - prolactin regulatory element binding [Source:MGI Symbol;Acc:MGI:1355326]
48. Hgs ENSMUSG00000025793, ENSMUSG00000116045 690 0.729 - - - - 0.729 - HGF-regulated tyrosine kinase substrate [Source:MGI Symbol;Acc:MGI:104681]
49. Emid1 ENSMUSG00000034164 456 0.728 0.728 - - - - - EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]
50. Clcn3 ENSMUSG00000004319 2035 0.728 - - - - 0.728 - chloride channel, voltage-sensitive 3 [Source:MGI Symbol;Acc:MGI:103555]
51. Trrap ENSMUSG00000045482 2414 0.727 - 0.727 - - - - transformation/transcription domain-associated protein [Source:MGI Symbol;Acc:MGI:2153272]
52. Minos1 ENSMUSG00000050608 7246 0.727 - 0.727 - - - - mitochondrial inner membrane organizing system 1 [Source:MGI Symbol;Acc:MGI:1913628]
53. Nova1 ENSMUSG00000021047 658 0.726 - - - - 0.726 - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
54. Ildr2 ENSMUSG00000040612 1142 0.726 0.726 - - - - - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
55. Hbb-bh1 ENSMUSG00000052217 55379 0.724 0.724 - - - - - hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
56. Lman2 ENSMUSG00000021484 2842 0.723 - - - - 0.723 - lectin, mannose-binding 2 [Source:MGI Symbol;Acc:MGI:1914140]
57. Adk ENSMUSG00000039197 2124 0.722 - - - - 0.722 - adenosine kinase [Source:MGI Symbol;Acc:MGI:87930]
58. Zfp536 ENSMUSG00000043456 869 0.722 0.722 - - - - - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
59. Pcdh8 ENSMUSG00000036422 452 0.721 0.721 - - - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
60. H2-K1 ENSMUSG00000061232 613 0.72 0.720 - - - - - histocompatibility 2, K1, K region [Source:MGI Symbol;Acc:MGI:95904]
61. Aup1 ENSMUSG00000068328 1617 0.719 - - - - 0.719 - ancient ubiquitous protein 1 [Source:MGI Symbol;Acc:MGI:107789]
62. Gatc ENSMUSG00000029536 892 0.718 - - - - 0.718 - glutamyl-tRNA(Gln) amidotransferase, subunit C [Source:MGI Symbol;Acc:MGI:1923776]
63. Ecd ENSMUSG00000021810 4388 0.718 - - - - 0.718 - ecdysoneless cell cycle regulator [Source:MGI Symbol;Acc:MGI:1917851]
64. Rras ENSMUSG00000038387 1254 0.717 - - - - 0.717 - related RAS viral (r-ras) oncogene [Source:MGI Symbol;Acc:MGI:98179]
65. Dnajc12 ENSMUSG00000036764 649 0.717 - - - - 0.717 - DnaJ heat shock protein family (Hsp40) member C12 [Source:MGI Symbol;Acc:MGI:1353428]
66. Nxf1 ENSMUSG00000010097 3951 0.716 - - - - 0.716 - nuclear RNA export factor 1 [Source:MGI Symbol;Acc:MGI:1858330]
67. Car2 ENSMUSG00000027562 1176 0.714 0.714 - - - - - carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
68. Mycl ENSMUSG00000028654 904 0.714 - 0.714 - - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
69. E430025E21Rik 3136 0.714 - - - - 0.714 - RIKEN cDNA E430025E21 gene, transcript variant X1
70. Ndufv3 ENSMUSG00000024038 4549 0.712 - - - - 0.712 - NADH:ubiquinone oxidoreductase core subunit V3 [Source:MGI Symbol;Acc:MGI:1890894]
71. Mto1 ENSMUSG00000032342 1387 0.711 0.711 - - - - - mitochondrial tRNA translation optimization 1 [Source:MGI Symbol;Acc:MGI:1915541]
72. Tead2 ENSMUSG00000030796 19439 0.71 - - - - 0.710 - TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
73. Rfx4 ENSMUSG00000020037 455 0.71 0.710 - - - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
74. Csnk2b ENSMUSG00000024387 4314 0.707 - - - - 0.707 - casein kinase 2, beta polypeptide [Source:MGI Symbol;Acc:MGI:88548]
75. Gm10093 ENSMUSG00000061062 597 0.707 - 0.707 - - - - predicted pseudogene 10093 [Source:MGI Symbol;Acc:MGI:3704479]
76. Vangl2 ENSMUSG00000026556 2575 0.707 - - - - 0.707 - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
77. Ccdc136 ENSMUSG00000029769 855 0.707 - - - - 0.707 - coiled-coil domain containing 136 [Source:MGI Symbol;Acc:MGI:1918128]
78. Rmst ENSMUSG00000112117 594 0.706 0.706 - - - - - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
79. Raver2 ENSMUSG00000035275 1134 0.706 - - - - 0.706 - ribonucleoprotein, PTB-binding 2 [Source:MGI Symbol;Acc:MGI:2443623]
80. Psip1 ENSMUSG00000028484 15380 0.706 - 0.706 - - - - PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116]
81. Fasn ENSMUSG00000025153 4241 0.704 - 0.704 - - - - fatty acid synthase [Source:MGI Symbol;Acc:MGI:95485]
82. Tbc1d23 ENSMUSG00000022749 1006 0.703 - - - - 0.703 - TBC1 domain family, member 23 [Source:MGI Symbol;Acc:MGI:1914831]
83. Pou3f1 ENSMUSG00000090125 496 0.703 0.703 - - - - - POU domain, class 3, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101896]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA