Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Kdm5c

Gene Name Gene ID Reads Annotation
Kdm5c ENSMUSG00000025332 3846 lysine (K)-specific demethylase 5C [Source:MGI Symbol;Acc:MGI:99781]







Genes with expression patterns similar to Kdm5c

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Kdm5c ENSMUSG00000025332 3846 6 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 5C [Source:MGI Symbol;Acc:MGI:99781]
2. Rpl27-ps2 ENSMUSG00000082171 89 1.678 - 0.870 - - 0.808 - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
3. Ccne1 ENSMUSG00000002068 2574 1.617 0.718 0.899 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
4. Fbxo25 ENSMUSG00000038365 940 1.612 - 0.880 - - 0.732 - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
5. Cbfa2t3 ENSMUSG00000006362 817 1.605 0.702 0.903 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
6. Wdr74 ENSMUSG00000042729 669 1.595 - 0.862 - - 0.733 - WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
7. Smim12 ENSMUSG00000042380 1404 1.592 0.750 0.842 - - - - small integral membrane protein 12 [Source:MGI Symbol;Acc:MGI:1933141]
8. Mrps18a ENSMUSG00000023967 955 1.518 0.728 0.790 - - - - mitochondrial ribosomal protein S18A [Source:MGI Symbol;Acc:MGI:1915815]
9. Akirin2 ENSMUSG00000028291 4706 1.516 0.736 0.780 - - - - akirin 2 [Source:MGI Symbol;Acc:MGI:1889364]
10. Traf3 ENSMUSG00000021277 1947 1.424 0.719 - - - 0.705 - TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]
11. Uchl3 ENSMUSG00000022111 1835 0.924 - 0.924 - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:MGI Symbol;Acc:MGI:1355274]
12. Usp36 ENSMUSG00000033909 2464 0.913 - 0.913 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
13. 9930021J03Rik ENSMUSG00000046138 2964 0.912 - 0.912 - - - - RIKEN cDNA 9930021J03 gene [Source:MGI Symbol;Acc:MGI:2444398]
14. Tmcc1 ENSMUSG00000030126 2753 0.91 - 0.910 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
15. Hsdl2 ENSMUSG00000028383 1294 0.91 - 0.910 - - - - hydroxysteroid dehydrogenase like 2 [Source:MGI Symbol;Acc:MGI:1919729]
16. Pik3r2 ENSMUSG00000031834, ENSMUSG00000111826 1072 0.908 - 0.908 - - - - phosphoinositide-3-kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1098772]
17. Gatad2b ENSMUSG00000042390 1312 0.904 - 0.904 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
18. Btbd9 ENSMUSG00000062202 1289 0.897 - 0.897 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
19. Larp7 ENSMUSG00000027968 2270 0.896 - 0.896 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
20. Tjap1 ENSMUSG00000012296 1888 0.895 - 0.895 - - - - tight junction associated protein 1 [Source:MGI Symbol;Acc:MGI:1921344]
21. Rrp1b ENSMUSG00000058392 1375 0.895 - 0.895 - - - - ribosomal RNA processing 1 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919712]
22. Suclg2 ENSMUSG00000061838 465 0.893 - 0.893 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
23. Gm26981 ENSMUSG00000098041 717 0.892 - 0.892 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
24. Zfp369 ENSMUSG00000021514 1130 0.891 - 0.891 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
25. 1700052N19Rik 1700052N19Rik 913 0.891 - 0.891 - - - -
26. Cnot6l ENSMUSG00000034724 2623 0.89 - 0.890 - - - - CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]
27. Ralbp1 ENSMUSG00000024096 4172 0.89 - 0.890 - - - - ralA binding protein 1 [Source:MGI Symbol;Acc:MGI:108466]
28. Mrpl44 ENSMUSG00000026248 1593 0.889 - 0.889 - - - - mitochondrial ribosomal protein L44 [Source:MGI Symbol;Acc:MGI:1916413]
29. Pom121 ENSMUSG00000053293 574 0.889 - 0.889 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
30. Pole ENSMUSG00000007080 3516 0.888 - 0.888 - - - - polymerase (DNA directed), epsilon [Source:MGI Symbol;Acc:MGI:1196391]
31. Tmem135 ENSMUSG00000039428 946 0.888 - 0.888 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
32. Decr2 ENSMUSG00000036775 1047 0.888 - 0.888 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
33. Apoo ENSMUSG00000079508 815 0.887 - 0.887 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
34. Ssh2 ENSMUSG00000037926 2307 0.887 - 0.887 - - - - slingshot protein phosphatase 2 [Source:MGI Symbol;Acc:MGI:2679255]
35. Mark2 ENSMUSG00000024969 2830 0.887 - 0.887 - - - - MAP/microtubule affinity regulating kinase 2 [Source:MGI Symbol;Acc:MGI:99638]
36. Lnp 1121 0.886 - 0.886 - - - - limb and neural patterns, transcript variant X4
37. Dhrs1 ENSMUSG00000002332 3014 0.886 - 0.886 - - - - dehydrogenase/reductase (SDR family) member 1 [Source:MGI Symbol;Acc:MGI:1196314]
38. Eed ENSMUSG00000030619 1900 0.886 - 0.886 - - - - embryonic ectoderm development [Source:MGI Symbol;Acc:MGI:95286]
39. Trim8 ENSMUSG00000025034 1494 0.886 - 0.886 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
40. Mirg ENSMUSG00000097391 2711 0.885 - 0.885 - - - - miRNA containing gene [Source:MGI Symbol;Acc:MGI:3781106]
41. Mcc ENSMUSG00000071856 4024 0.885 - 0.885 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
42. Gm25735 ENSMUSG00000092905 617 0.885 - 0.885 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
43. Tmem246 ENSMUSG00000039611 866 0.885 - 0.885 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
44. Trmt112-ps2 ENSMUSG00000070572 2109 0.885 - 0.885 - - - - tRNA methyltransferase 11-2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651720]
45. Wac ENSMUSG00000024283 3263 0.885 - 0.885 - - - - WW domain containing adaptor with coiled-coil [Source:MGI Symbol;Acc:MGI:2387357]
46. Nmral1 ENSMUSG00000063445 5289 0.884 - 0.884 - - - - NmrA-like family domain containing 1 [Source:MGI Symbol;Acc:MGI:1915074]
47. Zfp865 ENSMUSG00000074405 1223 0.884 - 0.884 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
48. Sik2 ENSMUSG00000037112 1369 0.884 - 0.884 - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
49. Bri3bp ENSMUSG00000037905 6269 0.884 - 0.884 - - - - Bri3 binding protein [Source:MGI Symbol;Acc:MGI:1924059]
50. Cxxc4 ENSMUSG00000044365 723 0.883 - 0.883 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
51. Gm4944 968 0.883 - 0.883 - - - - predicted gene 4944
52. Taf5l ENSMUSG00000038697 1439 0.883 - 0.883 - - - - TATA-box binding protein associated factor 5 like [Source:MGI Symbol;Acc:MGI:1919039]
53. Dhx34 ENSMUSG00000006019 240 0.883 - 0.883 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
54. Rhbdf1 ENSMUSG00000020282 1113 0.883 - 0.883 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
55. mt-Atp8 ENSMUSG00000064356 13180 0.883 - 0.883 - - - - mitochondrially encoded ATP synthase 8 [Source:MGI Symbol;Acc:MGI:99926]
56. Dmxl2 ENSMUSG00000041268 894 0.882 - 0.882 - - - - Dmx-like 2 [Source:MGI Symbol;Acc:MGI:2444630]
57. 2010111I01Rik ENSMUSG00000021458 591 0.882 - 0.882 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
58. Fdps ENSMUSG00000059743 2077 0.882 - 0.882 - - - - farnesyl diphosphate synthetase [Source:MGI Symbol;Acc:MGI:104888]
59. Prkag1 ENSMUSG00000067713 1318 0.882 - 0.882 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
60. Cdc25a ENSMUSG00000032477 3539 0.881 - 0.881 - - - - cell division cycle 25A [Source:MGI Symbol;Acc:MGI:103198]
61. Dera ENSMUSG00000030225 1240 0.881 - 0.881 - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
62. Smim4 ENSMUSG00000058351 454 0.881 - 0.881 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
63. Ubtd1 ENSMUSG00000025171 336 0.88 - 0.880 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
64. 2210408I21Rik ENSMUSG00000071252 189 0.88 - 0.880 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
65. 0610009B22Rik ENSMUSG00000007777 752 0.88 - 0.880 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
66. Dcun1d3 ENSMUSG00000048787 898 0.88 - 0.880 - - - - DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2679003]
67. Zfx ENSMUSG00000079509 2261 0.88 - 0.880 - - - - zinc finger protein X-linked [Source:MGI Symbol;Acc:MGI:99211]
68. Tnfrsf1a ENSMUSG00000030341 711 0.88 - 0.880 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
69. Nradd ENSMUSG00000032491 668 0.88 - 0.880 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
70. Ndufb4 ENSMUSG00000022820 1605 0.88 - 0.880 - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
71. Zbtb12 ENSMUSG00000049823 373 0.879 - 0.879 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
72. Coa6 ENSMUSG00000051671 731 0.878 - 0.878 - - - - cytochrome c oxidase assembly factor 6 [Source:MGI Symbol;Acc:MGI:1915142]
73. Cops8 ENSMUSG00000034432 3968 0.877 - 0.877 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
74. Zfp157 ENSMUSG00000036898 1185 0.877 - 0.877 - - - - zinc finger protein 157 [Source:MGI Symbol;Acc:MGI:1919404]
75. Cep192 ENSMUSG00000024542 1349 0.877 - 0.877 - - - - centrosomal protein 192 [Source:MGI Symbol;Acc:MGI:1918049]
76. Klhl6 ENSMUSG00000043008 952 0.877 - 0.877 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
77. St3gal2 ENSMUSG00000031749 2401 0.877 - 0.877 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
78. Usp38 ENSMUSG00000038250 1125 0.877 - 0.877 - - - - ubiquitin specific peptidase 38 [Source:MGI Symbol;Acc:MGI:1922091]
79. Twf2 ENSMUSG00000023277 849 0.877 - 0.877 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
80. Gm26782 ENSMUSG00000097431 428 0.876 - 0.876 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
81. Gm10713 Gm10713 1480 0.876 - 0.876 - - - -
82. Gmds ENSMUSG00000038372 653 0.876 - 0.876 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
83. Zfp160 ENSMUSG00000067942 1222 0.876 - 0.876 - - - - zinc finger protein 160 [Source:MGI Symbol;Acc:MGI:108187]
84. Slc38a3 ENSMUSG00000010064 147 0.875 - 0.875 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
85. Zfp707 ENSMUSG00000034429 447 0.875 - 0.875 - - - - zinc finger protein 707 [Source:MGI Symbol;Acc:MGI:1916270]
86. Ep400 ENSMUSG00000029505 7247 0.875 - 0.875 - - - - E1A binding protein p400 [Source:MGI Symbol;Acc:MGI:1276124]
87. 2410015M20Rik ENSMUSG00000049760 1948 0.875 - 0.875 - - - - RIKEN cDNA 2410015M20 gene [Source:MGI Symbol;Acc:MGI:2442174]
88. Bckdha ENSMUSG00000060376 653 0.875 - 0.875 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
89. Tmem186 ENSMUSG00000043140 711 0.875 - 0.875 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
90. Kcnk5 ENSMUSG00000023243 191 0.874 - 0.874 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
91. Dync2h1 ENSMUSG00000047193 880 0.874 - 0.874 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:MGI Symbol;Acc:MGI:107736]
92. Gm5776 ENSMUSG00000099647 589 0.874 - 0.874 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
93. Frk ENSMUSG00000019779 639 0.873 - 0.873 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
94. Pabpc4l ENSMUSG00000090919 1259 0.873 - 0.873 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
95. Ing2 ENSMUSG00000063049 913 0.873 - 0.873 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
96. Smpd3 ENSMUSG00000031906 194 0.873 - 0.873 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
97. Gm12942 332 0.873 - 0.873 - - - - predicted gene 12942
98. Rin2 ENSMUSG00000001768 996 0.873 - 0.873 - - - - Ras and Rab interactor 2 [Source:MGI Symbol;Acc:MGI:1921280]
99. Rab11fip5 ENSMUSG00000051343 496 0.873 - 0.873 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
100. Atg3 ENSMUSG00000022663 1323 0.872 - 0.872 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]

There are 534 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA